NF0106500 | calpain 5

_IDPredictionOTHERSPmTPCS_Position
NF0106500OTHER0.9990940.0006160.000290
No Results

  • Fasta :-

    >NF0106500 MDICKPLNLRSISGDERLLVFFSNETSETVKLYWINYEGTEIEVATLFPKDAVGQQSYWT HCFIMRSMNTPDKIVGLYVLDSSLENGCILKSGQVHNQSSLKPNSTSPMVKNFQKVCYEC SKNGELPSYTPELKSEASYKQATISVRNATQKTLDVFWIDFEGKLLPYGQVQPNETFASL SAVNHVFVFKTQDGSYEKVVKVSLNKPLVILEEQTISICAQTLDEPTETSCHPIIAAQIS ERTGARNMAFSYPASDSLVRDIESHLRKEGKRFIDEDFPPQPDWVRAYDFFNGDVAIVKK GFCATSPRQGGVGDCWLIQSLSGAAIRPQEVKKAFCLCESIDPQLGLYAVTFHSEDPGKK YTILLDDYFPMNSDFIFAKSAARGELWVPLIEKAFAKMIGGFLDLAASKHSFNPCHVLVA LLGGKAKHFEWYSGENSVGKKLMKENQFWPLLERLLDSEKSAPVCTSKAISGGDGTVDSF GIVHYHGYSILGYRKFPQYNLNLIQIRNTWANTEWGGSFGDNSKEWQKYPQLAKELNHEV KDNGCFWMTYEDFIKHYCVLWWNEHE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0106500.fa Sequence name : NF0106500 Sequence length : 566 VALUES OF COMPUTED PARAMETERS Coef20 : 4.000 CoefTot : 0.000 ChDiff : -10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.788 1.229 0.098 0.502 MesoH : -0.469 0.410 -0.365 0.274 MuHd_075 : 24.858 17.818 8.196 4.879 MuHd_095 : 23.392 13.560 7.420 5.161 MuHd_100 : 24.049 13.315 7.583 4.351 MuHd_105 : 15.432 7.316 5.485 2.048 Hmax_075 : 7.500 9.900 2.076 3.410 Hmax_095 : 3.100 9.900 1.761 3.290 Hmax_100 : 3.100 9.900 1.761 3.290 Hmax_105 : 7.800 7.300 1.241 2.650 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8288 0.1712 DFMC : 0.8932 0.1068
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 566 NF0106500 MDICKPLNLRSISGDERLLVFFSNETSETVKLYWINYEGTEIEVATLFPKDAVGQQSYWTHCFIMRSMNTPDKIVGLYVL 80 DSSLENGCILKSGQVHNQSSLKPNSTSPMVKNFQKVCYECSKNGELPSYTPELKSEASYKQATISVRNATQKTLDVFWID 160 FEGKLLPYGQVQPNETFASLSAVNHVFVFKTQDGSYEKVVKVSLNKPLVILEEQTISICAQTLDEPTETSCHPIIAAQIS 240 ERTGARNMAFSYPASDSLVRDIESHLRKEGKRFIDEDFPPQPDWVRAYDFFNGDVAIVKKGFCATSPRQGGVGDCWLIQS 320 LSGAAIRPQEVKKAFCLCESIDPQLGLYAVTFHSEDPGKKYTILLDDYFPMNSDFIFAKSAARGELWVPLIEKAFAKMIG 400 GFLDLAASKHSFNPCHVLVALLGGKAKHFEWYSGENSVGKKLMKENQFWPLLERLLDSEKSAPVCTSKAISGGDGTVDSF 480 GIVHYHGYSILGYRKFPQYNLNLIQIRNTWANTEWGGSFGDNSKEWQKYPQLAKELNHEVKDNGCFWMTYEDFIKHYCVL 560 WWNEHE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0106500 5 --MDICK|PL 0.056 . NF0106500 10 CKPLNLR|SI 0.129 . NF0106500 17 SISGDER|LL 0.072 . NF0106500 31 ETSETVK|LY 0.066 . NF0106500 50 VATLFPK|DA 0.080 . NF0106500 66 THCFIMR|SM 0.121 . NF0106500 73 SMNTPDK|IV 0.087 . NF0106500 91 ENGCILK|SG 0.070 . NF0106500 102 HNQSSLK|PN 0.075 . NF0106500 111 STSPMVK|NF 0.070 . NF0106500 115 MVKNFQK|VC 0.061 . NF0106500 122 VCYECSK|NG 0.055 . NF0106500 134 SYTPELK|SE 0.063 . NF0106500 140 KSEASYK|QA 0.089 . NF0106500 147 QATISVR|NA 0.107 . NF0106500 152 VRNATQK|TL 0.077 . NF0106500 164 WIDFEGK|LL 0.065 . NF0106500 190 NHVFVFK|TQ 0.065 . NF0106500 198 QDGSYEK|VV 0.067 . NF0106500 201 SYEKVVK|VS 0.057 . NF0106500 206 VKVSLNK|PL 0.062 . NF0106500 242 AAQISER|TG 0.078 . NF0106500 246 SERTGAR|NM 0.086 . NF0106500 260 ASDSLVR|DI 0.119 . NF0106500 267 DIESHLR|KE 0.080 . NF0106500 268 IESHLRK|EG 0.087 . NF0106500 271 HLRKEGK|RF 0.072 . NF0106500 272 LRKEGKR|FI 0.288 . NF0106500 286 PQPDWVR|AY 0.080 . NF0106500 299 GDVAIVK|KG 0.057 . NF0106500 300 DVAIVKK|GF 0.119 . NF0106500 308 FCATSPR|QG 0.120 . NF0106500 327 LSGAAIR|PQ 0.088 . NF0106500 332 IRPQEVK|KA 0.069 . NF0106500 333 RPQEVKK|AF 0.128 . NF0106500 359 HSEDPGK|KY 0.072 . NF0106500 360 SEDPGKK|YT 0.089 . NF0106500 379 SDFIFAK|SA 0.144 . NF0106500 383 FAKSAAR|GE 0.077 . NF0106500 393 WVPLIEK|AF 0.063 . NF0106500 397 IEKAFAK|MI 0.104 . NF0106500 409 LDLAASK|HS 0.057 . NF0106500 425 VALLGGK|AK 0.054 . NF0106500 427 LLGGKAK|HF 0.077 . NF0106500 440 GENSVGK|KL 0.075 . NF0106500 441 ENSVGKK|LM 0.111 . NF0106500 444 VGKKLMK|EN 0.059 . NF0106500 454 FWPLLER|LL 0.071 . NF0106500 460 RLLDSEK|SA 0.070 . NF0106500 468 APVCTSK|AI 0.093 . NF0106500 494 YSILGYR|KF 0.077 . NF0106500 495 SILGYRK|FP 0.072 . NF0106500 507 LNLIQIR|NT 0.098 . NF0106500 524 SFGDNSK|EW 0.060 . NF0106500 528 NSKEWQK|YP 0.059 . NF0106500 534 KYPQLAK|EL 0.064 . NF0106500 541 ELNHEVK|DN 0.096 . NF0106500 555 TYEDFIK|HY 0.062 . ____________________________^_________________

  • Fasta :-

    >NF0106500 ATGGACATTTGCAAACCTCTGAATTTACGATCCATCTCGGGTGATGAAAGACTCCTCGTG TTTTTCAGTAATGAAACCTCGGAGACTGTCAAGTTGTATTGGATTAATTATGAAGGTACA GAGATTGAAGTTGCAACTCTCTTTCCGAAGGATGCAGTCGGACAACAGAGCTATTGGACT CATTGTTTCATCATGAGAAGTATGAACACACCTGACAAAATTGTTGGACTCTATGTATTG GATTCCTCCTTAGAGAATGGCTGCATTTTGAAATCGGGTCAGGTCCATAACCAATCGTCG TTGAAACCGAATTCCACTTCACCAATGGTAAAGAATTTTCAAAAGGTTTGCTATGAATGT TCAAAAAACGGTGAATTGCCTAGTTATACTCCTGAATTGAAATCCGAGGCGAGTTACAAA CAAGCAACCATTTCAGTACGAAATGCCACTCAAAAAACCTTAGATGTATTTTGGATTGAT TTTGAAGGAAAATTATTGCCATATGGTCAAGTGCAACCGAATGAAACCTTTGCATCATTG AGTGCTGTTAACCATGTCTTTGTGTTCAAAACTCAGGACGGATCCTATGAAAAGGTTGTG AAAGTATCACTTAACAAACCTTTAGTAATTTTGGAAGAACAAACAATTTCGATCTGTGCG CAAACCTTAGATGAACCAACCGAGACCAGCTGTCACCCCATCATTGCTGCACAAATATCA GAGAGAACCGGAGCAAGAAATATGGCCTTCTCATATCCTGCAAGCGATTCTCTCGTTCGA GATATTGAGTCTCATCTTCGCAAAGAAGGAAAACGATTTATCGATGAAGATTTCCCTCCC CAACCTGATTGGGTGCGTGCCTATGACTTCTTTAATGGAGATGTCGCTATTGTAAAGAAA GGATTTTGTGCTACTTCGCCACGACAAGGAGGAGTTGGAGATTGTTGGCTCATTCAATCC TTGTCTGGAGCTGCTATTCGACCTCAAGAGGTCAAGAAGGCTTTTTGCTTGTGTGAATCT ATTGACCCTCAGTTAGGTCTGTATGCAGTCACGTTTCACTCTGAAGATCCAGGAAAGAAG TACACCATTCTTTTGGACGATTATTTTCCCATGAATAGTGATTTTATCTTTGCAAAATCT GCTGCAAGAGGAGAGTTATGGGTACCGCTCATTGAGAAGGCCTTTGCTAAAATGATTGGA GGATTTTTGGATTTGGCTGCATCGAAACATTCATTCAATCCCTGTCACGTGTTGGTTGCG CTGTTGGGAGGCAAAGCAAAACATTTTGAGTGGTATTCTGGAGAGAACTCTGTTGGAAAA AAGCTAATGAAGGAGAATCAATTTTGGCCTCTCCTCGAACGGCTACTTGACAGCGAAAAG AGTGCACCTGTGTGTACCAGTAAAGCAATAAGCGGAGGAGACGGTACTGTCGATTCGTTT GGCATTGTTCATTACCATGGCTACAGTATTTTAGGATATAGAAAATTCCCTCAATACAAT CTCAATTTGATTCAGATCAGGAATACATGGGCCAATACAGAATGGGGAGGCAGCTTTGGT GACAATTCTAAAGAATGGCAGAAATATCCGCAGCTAGCAAAAGAATTGAATCATGAAGTG AAAGATAATGGTTGTTTCTGGATGACTTATGAAGATTTTATCAAGCATTATTGTGTTCTT TGGTGGAATGAGCATGAATAG
  • Download Fasta

  • Fasta :-

    MDICKPLNLRSISGDERLLVFFSNETSETVKLYWINYEGTEIEVATLFPKDAVGQQSYWT HCFIMRSMNTPDKIVGLYVLDSSLENGCILKSGQVHNQSSLKPNSTSPMVKNFQKVCYEC SKNGELPSYTPELKSEASYKQATISVRNATQKTLDVFWIDFEGKLLPYGQVQPNETFASL SAVNHVFVFKTQDGSYEKVVKVSLNKPLVILEEQTISICAQTLDEPTETSCHPIIAAQIS ERTGARNMAFSYPASDSLVRDIESHLRKEGKRFIDEDFPPQPDWVRAYDFFNGDVAIVKK GFCATSPRQGGVGDCWLIQSLSGAAIRPQEVKKAFCLCESIDPQLGLYAVTFHSEDPGKK YTILLDDYFPMNSDFIFAKSAARGELWVPLIEKAFAKMIGGFLDLAASKHSFNPCHVLVA LLGGKAKHFEWYSGENSVGKKLMKENQFWPLLERLLDSEKSAPVCTSKAISGGDGTVDSF GIVHYHGYSILGYRKFPQYNLNLIQIRNTWANTEWGGSFGDNSKEWQKYPQLAKELNHEV KDNGCFWMTYEDFIKHYCVLWWNEHE

  • title: catalytic site
  • coordinates: C315,H486,N508
No Results
No Results
IDSitePeptideScoreMethod
NF0106500471 SSKAISGGDG0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India