NF0108310 | pyrrolidone-carboxylate peptidase isoform 1

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_IDPredictionOTHERSPmTPCS_Position
NF0108310OTHER0.9999340.0000130.000053
No Results

  • Fasta :-

    >NF0108310 MFETITNQTSNNNSHETKKKQKVTIHLTGFGPFAGVKENPTTLIIETLKNENFALSSPIT NNDYEINPIHYSIIETSMKAVQQYFEEMKCNSGGGDDDSKYPSIDIFIHFGVSGNSIMYE LEERAKNEKTFRARDEQGEQPLNEPINEDLPIDSFLHCNLTTHLNSIIESVNLKLHENSL HPPLSQLVLESARDKLRRINMTGTLGGVKSTKNALSSNPNEDFIQKQLEELRTDLQESLS LITNAGAFCKASQDAGLFICNYCYYHSLQYSTCGDVSRNGLDYNNKKDEMQKKSQRKCYS LFVHVPPHNVIPVKVQVEFVKTLLQVIVESL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0108310.fa Sequence name : NF0108310 Sequence length : 331 VALUES OF COMPUTED PARAMETERS Coef20 : 3.492 CoefTot : 0.000 ChDiff : -9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.729 1.194 0.012 0.491 MesoH : -0.896 -0.181 -0.500 0.138 MuHd_075 : 26.893 15.588 8.113 4.515 MuHd_095 : 25.444 16.437 7.993 4.823 MuHd_100 : 17.407 13.264 6.075 4.464 MuHd_105 : 5.327 7.904 2.603 2.951 Hmax_075 : 6.883 1.050 -1.637 1.435 Hmax_095 : 8.400 2.450 -0.719 1.864 Hmax_100 : -2.600 -1.800 -3.281 0.930 Hmax_105 : -0.500 -1.283 -3.731 1.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9555 0.0445 DFMC : 0.9619 0.0381
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 331 NF0108310 MFETITNQTSNNNSHETKKKQKVTIHLTGFGPFAGVKENPTTLIIETLKNENFALSSPITNNDYEINPIHYSIIETSMKA 80 VQQYFEEMKCNSGGGDDDSKYPSIDIFIHFGVSGNSIMYELEERAKNEKTFRARDEQGEQPLNEPINEDLPIDSFLHCNL 160 TTHLNSIIESVNLKLHENSLHPPLSQLVLESARDKLRRINMTGTLGGVKSTKNALSSNPNEDFIQKQLEELRTDLQESLS 240 LITNAGAFCKASQDAGLFICNYCYYHSLQYSTCGDVSRNGLDYNNKKDEMQKKSQRKCYSLFVHVPPHNVIPVKVQVEFV 320 KTLLQVIVESL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0108310 18 NNSHETK|KK 0.083 . NF0108310 19 NSHETKK|KQ 0.097 . NF0108310 20 SHETKKK|QK 0.128 . NF0108310 22 ETKKKQK|VT 0.067 . NF0108310 37 GPFAGVK|EN 0.060 . NF0108310 49 LIIETLK|NE 0.059 . NF0108310 79 IIETSMK|AV 0.093 . NF0108310 89 QYFEEMK|CN 0.074 . NF0108310 100 GGDDDSK|YP 0.065 . NF0108310 124 MYELEER|AK 0.074 . NF0108310 126 ELEERAK|NE 0.056 . NF0108310 129 ERAKNEK|TF 0.069 . NF0108310 132 KNEKTFR|AR 0.133 . NF0108310 134 EKTFRAR|DE 0.115 . NF0108310 174 IESVNLK|LH 0.068 . NF0108310 193 LVLESAR|DK 0.087 . NF0108310 195 LESARDK|LR 0.065 . NF0108310 197 SARDKLR|RI 0.097 . NF0108310 198 ARDKLRR|IN 0.207 . NF0108310 209 GTLGGVK|ST 0.071 . NF0108310 212 GGVKSTK|NA 0.072 . NF0108310 226 NEDFIQK|QL 0.067 . NF0108310 232 KQLEELR|TD 0.066 . NF0108310 250 NAGAFCK|AS 0.073 . NF0108310 278 TCGDVSR|NG 0.085 . NF0108310 286 GLDYNNK|KD 0.062 . NF0108310 287 LDYNNKK|DE 0.128 . NF0108310 292 KKDEMQK|KS 0.059 . NF0108310 293 KDEMQKK|SQ 0.178 . NF0108310 296 MQKKSQR|KC 0.089 . NF0108310 297 QKKSQRK|CY 0.099 . NF0108310 314 HNVIPVK|VQ 0.063 . NF0108310 321 VQVEFVK|TL 0.068 . ____________________________^_________________

  • Fasta :-

    >NF0108310 ATGTTTGAAACCATCACCAATCAAACAAGCAACAACAACAGCCATGAAACAAAAAAGAAG CAAAAAGTTACAATTCATTTAACAGGATTTGGACCATTTGCTGGTGTGAAAGAGAATCCA ACCACGCTGATCATTGAAACCTTGAAGAATGAAAATTTTGCACTCTCTTCTCCGATCACC AACAATGATTATGAAATTAATCCCATTCATTACAGTATTATTGAAACTTCGATGAAAGCA GTCCAACAATATTTTGAAGAGATGAAATGTAATAGTGGTGGTGGTGATGATGATTCGAAA TATCCATCCATTGATATTTTCATTCATTTTGGAGTGAGTGGAAATAGCATCATGTACGAG TTGGAAGAGAGAGCCAAGAATGAAAAGACCTTTCGTGCACGAGATGAACAAGGAGAACAA CCTCTCAATGAACCCATTAATGAAGACCTTCCTATTGATTCCTTCCTCCATTGCAATCTC ACCACTCACCTTAATTCCATCATTGAGAGCGTCAATCTTAAATTACATGAAAATTCTCTC CATCCTCCACTCTCTCAATTGGTTCTTGAATCTGCTCGTGATAAATTACGTCGCATCAAC ATGACTGGAACACTTGGTGGTGTGAAGTCTACCAAGAATGCTCTCTCTTCCAATCCAAAT GAAGATTTCATTCAAAAACAACTCGAGGAATTGCGCACCGATTTACAAGAATCTCTTTCT CTCATTACCAATGCAGGAGCTTTCTGTAAAGCTTCCCAAGATGCAGGTCTCTTTATTTGT AATTATTGTTACTATCATTCCTTGCAATATTCCACATGTGGTGATGTGAGTAGGAATGGT CTTGATTACAACAACAAGAAGGATGAAATGCAGAAAAAGTCTCAGAGAAAATGTTACAGC TTATTCGTTCACGTTCCTCCTCATAATGTAATTCCAGTGAAGGTTCAGGTAGAATTTGTC AAGACTCTACTCCAAGTTATTGTGGAAAGTCTTTAG
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  • Fasta :-

    MFETITNQTSNNNSHETKKKQKVTIHLTGFGPFAGVKENPTTLIIETLKNENFALSSPIT NNDYEINPIHYSIIETSMKAVQQYFEEMKCNSGGGDDDSKYPSIDIFIHFGVSGNSIMYE LEERAKNEKTFRARDEQGEQPLNEPINEDLPIDSFLHCNLTTHLNSIIESVNLKLHENSL HPPLSQLVLESARDKLRRINMTGTLGGVKSTKNALSSNPNEDFIQKQLEELRTDLQESLS LITNAGAFCKASQDAGLFICNYCYYHSLQYSTCGDVSRNGLDYNNKKDEMQKKSQRKCYS LFVHVPPHNVIPVKVQVEFVKTLLQVIVESL

  • title: catalytic triad
  • coordinates: E122,C260,H304
No Results
No Results
IDSitePeptideScoreMethod
NF0108310166 STHLNSIIES0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India