NF0111530 | ufm1-specific protease 2

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_IDPredictionOTHERSPmTPCS_Position
NF0111530OTHER0.7037190.0031720.293109
No Results

  • Fasta :-

    >NF0111530 MLSSQSSPTFLIQFNSLIKNRLGQLFKHLASSTNPVLGYLIGMNGNDQVHILNFMKSLSN VDQSELDLMKLMMIPKGLEIVGLYTTQGTLAKYHGSEVVIGSEAPETEKVITSWLSSQFP SLFSKENNFKQLLVMVGGGSSSPLEVFNFNISDKTAQVIRQDAIREFSEISIVGDKHELQ QHVKASTTAFIISRLHCDLIIPYTFDPQASTNSDQSMTETFKKHIDSYIDTLKSEEKTLI RSASLSTDNSAEQSSKKNKSTLSTTASVAPIEIRGRESTIESILPEKLTVVDTSSQQLKV DANFNKKEMTSKNKKKKLPKQTLGEFLKLSEHKSDENTTSSTVKTISKFLHFDAFLNLSP NQYGSGIIISSDKKHTNCKLSLETTSYIPIYQKGTMVNNLDNLRQVLVEGLADQLVFVKK YFGSGSFLLPHIGXXXXXXXXGFYPFLPKDYPHVFTCCYPFYSDDIVFEQRNEQNAIKLR EEYHKRLYFSLKQPFIRTNQALTFGPSPKTKISEFNKKILNVHLYAGYPSTIKSTNPNNL HLVRGDYLYSHYCQDKFNDEGWGCAYRSLQTLISHAQYHAGAVVVNLPTHQEIQKCLVDC GDKQASFLGSRQWIGAFENTIVLEKWCGVQSKVLYVNRGDEMNSHARTIANHFDVNGSPI MIGGGVLAYTMLGIEFDELTGECSYLILDPHFTGSINDPEYLEDIISGGWCGWKTREQVF KDSVFYNLCMPQLSSEGV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0111530.fa Sequence name : NF0111530 Sequence length : 738 VALUES OF COMPUTED PARAMETERS Coef20 : 4.283 CoefTot : -1.772 ChDiff : -3 ZoneTo : 61 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.812 1.565 0.295 0.705 MesoH : -0.264 0.262 -0.321 0.287 MuHd_075 : 17.789 17.434 7.307 4.509 MuHd_095 : 30.006 30.913 10.154 8.667 MuHd_100 : 35.762 31.933 11.601 8.971 MuHd_105 : 38.908 29.597 12.078 9.283 Hmax_075 : 12.250 12.000 2.170 4.982 Hmax_095 : 13.737 18.200 1.726 6.072 Hmax_100 : 18.700 21.500 3.557 6.650 Hmax_105 : 17.850 20.533 3.381 6.323 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3955 0.6045 DFMC : 0.4842 0.5158 This protein is probably imported in chloroplast. f(Ser) = 0.1475 f(Arg) = 0.0164 CMi = 1.58730 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 738 NF0111530 MLSSQSSPTFLIQFNSLIKNRLGQLFKHLASSTNPVLGYLIGMNGNDQVHILNFMKSLSNVDQSELDLMKLMMIPKGLEI 80 VGLYTTQGTLAKYHGSEVVIGSEAPETEKVITSWLSSQFPSLFSKENNFKQLLVMVGGGSSSPLEVFNFNISDKTAQVIR 160 QDAIREFSEISIVGDKHELQQHVKASTTAFIISRLHCDLIIPYTFDPQASTNSDQSMTETFKKHIDSYIDTLKSEEKTLI 240 RSASLSTDNSAEQSSKKNKSTLSTTASVAPIEIRGRESTIESILPEKLTVVDTSSQQLKVDANFNKKEMTSKNKKKKLPK 320 QTLGEFLKLSEHKSDENTTSSTVKTISKFLHFDAFLNLSPNQYGSGIIISSDKKHTNCKLSLETTSYIPIYQKGTMVNNL 400 DNLRQVLVEGLADQLVFVKKYFGSGSFLLPHIGXXXXXXXXGFYPFLPKDYPHVFTCCYPFYSDDIVFEQRNEQNAIKLR 480 EEYHKRLYFSLKQPFIRTNQALTFGPSPKTKISEFNKKILNVHLYAGYPSTIKSTNPNNLHLVRGDYLYSHYCQDKFNDE 560 GWGCAYRSLQTLISHAQYHAGAVVVNLPTHQEIQKCLVDCGDKQASFLGSRQWIGAFENTIVLEKWCGVQSKVLYVNRGD 640 EMNSHARTIANHFDVNGSPIMIGGGVLAYTMLGIEFDELTGECSYLILDPHFTGSINDPEYLEDIISGGWCGWKTREQVF 720 KDSVFYNLCMPQLSSEGV 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0111530 19 QFNSLIK|NR 0.057 . NF0111530 21 NSLIKNR|LG 0.072 . NF0111530 27 RLGQLFK|HL 0.067 . NF0111530 56 HILNFMK|SL 0.094 . NF0111530 70 SELDLMK|LM 0.054 . NF0111530 76 KLMMIPK|GL 0.082 . NF0111530 92 TQGTLAK|YH 0.078 . NF0111530 109 EAPETEK|VI 0.059 . NF0111530 125 FPSLFSK|EN 0.069 . NF0111530 130 SKENNFK|QL 0.068 . NF0111530 154 NFNISDK|TA 0.077 . NF0111530 160 KTAQVIR|QD 0.103 . NF0111530 165 IRQDAIR|EF 0.102 . NF0111530 176 ISIVGDK|HE 0.057 . NF0111530 184 ELQQHVK|AS 0.073 . NF0111530 194 TAFIISR|LH 0.080 . NF0111530 222 SMTETFK|KH 0.059 . NF0111530 223 MTETFKK|HI 0.165 . NF0111530 233 SYIDTLK|SE 0.077 . NF0111530 237 TLKSEEK|TL 0.062 . NF0111530 241 EEKTLIR|SA 0.133 . NF0111530 256 SAEQSSK|KN 0.064 . NF0111530 257 AEQSSKK|NK 0.107 . NF0111530 259 QSSKKNK|ST 0.118 . NF0111530 274 VAPIEIR|GR 0.089 . NF0111530 276 PIEIRGR|ES 0.073 . NF0111530 287 ESILPEK|LT 0.057 . NF0111530 299 TSSQQLK|VD 0.068 . NF0111530 306 VDANFNK|KE 0.066 . NF0111530 307 DANFNKK|EM 0.086 . NF0111530 312 KKEMTSK|NK 0.069 . NF0111530 314 EMTSKNK|KK 0.055 . NF0111530 315 MTSKNKK|KK 0.116 . NF0111530 316 TSKNKKK|KL 0.173 . NF0111530 317 SKNKKKK|LP 0.168 . NF0111530 320 KKKKLPK|QT 0.070 . NF0111530 328 TLGEFLK|LS 0.066 . NF0111530 333 LKLSEHK|SD 0.082 . NF0111530 344 TTSSTVK|TI 0.098 . NF0111530 348 TVKTISK|FL 0.063 . NF0111530 373 IIISSDK|KH 0.057 . NF0111530 374 IISSDKK|HT 0.117 . NF0111530 379 KKHTNCK|LS 0.059 . NF0111530 393 YIPIYQK|GT 0.059 . NF0111530 404 NNLDNLR|QV 0.084 . NF0111530 419 DQLVFVK|KY 0.064 . NF0111530 420 QLVFVKK|YF 0.146 . NF0111530 449 FYPFLPK|DY 0.069 . NF0111530 471 DIVFEQR|NE 0.074 . NF0111530 478 NEQNAIK|LR 0.060 . NF0111530 480 QNAIKLR|EE 0.095 . NF0111530 485 LREEYHK|RL 0.074 . NF0111530 486 REEYHKR|LY 0.132 . NF0111530 492 RLYFSLK|QP 0.072 . NF0111530 497 LKQPFIR|TN 0.101 . NF0111530 509 TFGPSPK|TK 0.068 . NF0111530 511 GPSPKTK|IS 0.088 . NF0111530 517 KISEFNK|KI 0.067 . NF0111530 518 ISEFNKK|IL 0.117 . NF0111530 533 GYPSTIK|ST 0.071 . NF0111530 544 NNLHLVR|GD 0.076 . NF0111530 556 SHYCQDK|FN 0.083 . NF0111530 567 GWGCAYR|SL 0.143 . NF0111530 595 THQEIQK|CL 0.070 . NF0111530 603 LVDCGDK|QA 0.058 . NF0111530 611 ASFLGSR|QW 0.087 . NF0111530 625 NTIVLEK|WC 0.064 . NF0111530 632 WCGVQSK|VL 0.073 . NF0111530 638 KVLYVNR|GD 0.091 . NF0111530 647 EMNSHAR|TI 0.105 . NF0111530 714 GGWCGWK|TR 0.067 . NF0111530 716 WCGWKTR|EQ 0.082 . NF0111530 721 TREQVFK|DS 0.090 . ____________________________^_________________

  • Fasta :-

    >NF0111530 ATGCTCTCATCACAATCATCACCTACTTTTCTCATTCAATTCAATTCCCTCATCAAAAAT AGACTGGGTCAATTATTTAAACATTTGGCTTCATCCACGAATCCGGTCCTTGGTTATTTG ATCGGAATGAATGGAAACGATCAGGTTCATATTTTGAATTTTATGAAGAGTCTTTCCAAT GTAGATCAAAGTGAATTGGATTTGATGAAGCTCATGATGATTCCGAAAGGTTTAGAAATT GTGGGATTATATACCACACAAGGAACACTGGCAAAATATCATGGCAGTGAAGTTGTTATT GGATCGGAAGCTCCAGAAACAGAGAAGGTAATAACCTCATGGCTTTCATCACAATTTCCA TCTCTATTTTCCAAAGAAAATAATTTTAAACAATTGTTGGTGATGGTTGGAGGTGGCTCT TCATCACCACTGGAGGTGTTTAATTTCAATATCTCGGATAAAACAGCTCAAGTCATTCGA CAGGATGCTATTCGTGAATTTTCTGAAATTTCCATTGTGGGAGACAAACATGAATTGCAA CAACATGTCAAAGCATCGACGACAGCTTTTATTATTTCCAGATTGCATTGCGACTTGATC ATTCCATATACATTTGATCCACAAGCGTCGACGAACAGCGATCAGTCAATGACGGAGACT TTTAAAAAACATATTGACTCCTATATTGACACTTTAAAATCTGAAGAAAAGACATTGATT AGATCTGCATCACTATCAACTGATAACTCTGCTGAACAGTCTTCCAAAAAGAACAAGTCT ACTTTAAGCACGACAGCTAGCGTAGCTCCTATTGAAATCCGTGGTCGTGAATCAACCATC GAGTCAATTTTGCCTGAGAAATTAACAGTGGTGGACACTTCAAGTCAACAATTGAAAGTG GATGCCAATTTTAACAAGAAGGAAATGACCTCAAAGAACAAGAAGAAAAAACTTCCAAAG CAAACCCTTGGAGAATTTTTGAAACTCAGTGAACACAAATCCGATGAAAATACAACATCC TCCACAGTGAAAACCATTTCGAAATTCTTGCATTTTGATGCCTTTTTAAATCTATCTCCC AATCAGTATGGCAGTGGAATTATCATTTCTTCAGACAAGAAACATACAAATTGCAAGCTC TCACTTGAAACAACGAGTTACATTCCAATTTATCAAAAGGGTACTATGGTAAATAATTTG GATAATTTAAGACAGGTTTTGGTTGAAGGTCTCGCTGACCAACTTGTCTTTGTCAAGAAG TATTTTGGAAGTGGAAGTTTTCTGTTGCCACACATTGGANNNNNNNNNNNNNNNNNNNNN NNTGGATTTTATCCATTTCTACCAAAAGACTATCCTCATGTTTTCACTTGTTGTTACCCA TTCTATAGTGACGATATTGTTTTTGAGCAACGTAATGAACAAAATGCCATCAAATTGAGA GAAGAATATCACAAGAGATTATACTTTTCATTGAAACAACCATTCATTCGAACCAATCAA GCTTTGACATTTGGTCCCTCTCCTAAAACCAAGATTAGCGAGTTCAACAAGAAAATCCTC AACGTCCATCTCTATGCAGGCTATCCATCAACCATCAAATCTACCAATCCAAACAATTTA CATCTCGTTCGTGGTGATTATTTGTATTCACATTATTGTCAAGACAAATTCAATGATGAA GGTTGGGGTTGTGCATACAGAAGTTTGCAAACTCTCATTTCACACGCACAGTATCATGCG GGAGCAGTTGTGGTAAATTTACCTACTCATCAAGAAATTCAGAAATGCCTTGTGGATTGT GGTGACAAGCAAGCATCCTTCTTGGGCTCTCGTCAATGGATTGGAGCTTTTGAAAATACC ATTGTGTTGGAAAAATGGTGTGGAGTGCAAAGTAAGGTCTTGTATGTGAATCGAGGAGAT GAAATGAATTCTCATGCCCGTACCATTGCAAATCATTTCGATGTGAATGGAAGTCCCATC ATGATTGGTGGAGGAGTGTTGGCTTACACCATGTTAGGAATTGAGTTTGATGAATTGACA GGAGAGTGTTCGTACTTGATTTTGGATCCTCATTTCACTGGTAGTATCAATGATCCAGAA TATTTGGAGGATATCATTTCTGGGGGCTGGTGTGGATGGAAAACACGAGAGCAAGTGTTC AAAGATTCTGTTTTCTATAATTTATGTATGCCTCAATTGAGCTCTGAGGGTGTTTAA
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  • Fasta :-

    MLSSQSSPTFLIQFNSLIKNRLGQLFKHLASSTNPVLGYLIGMNGNDQVHILNFMKSLSN VDQSELDLMKLMMIPKGLEIVGLYTTQGTLAKYHGSEVVIGSEAPETEKVITSWLSSQFP SLFSKENNFKQLLVMVGGGSSSPLEVFNFNISDKTAQVIRQDAIREFSEISIVGDKHELQ QHVKASTTAFIISRLHCDLIIPYTFDPQASTNSDQSMTETFKKHIDSYIDTLKSEEKTLI RSASLSTDNSAEQSSKKNKSTLSTTASVAPIEIRGRESTIESILPEKLTVVDTSSQQLKV DANFNKKEMTSKNKKKKLPKQTLGEFLKLSEHKSDENTTSSTVKTISKFLHFDAFLNLSP NQYGSGIIISSDKKHTNCKLSLETTSYIPIYQKGTMVNNLDNLRQVLVEGLADQLVFVKK YFGSGSFLLPHIGXXXXXXXXGFYPFLPKDYPHVFTCCYPFYSDDIVFEQRNEQNAIKLR EEYHKRLYFSLKQPFIRTNQALTFGPSPKTKISEFNKKILNVHLYAGYPSTIKSTNPNNL HLVRGDYLYSHYCQDKFNDEGWGCAYRSLQTLISHAQYHAGAVVVNLPTHQEIQKCLVDC GDKQASFLGSRQWIGAFENTIVLEKWCGVQSKVLYVNRGDEMNSHARTIANHFDVNGSPI MIGGGVLAYTMLGIEFDELTGECSYLILDPHFTGSINDPEYLEDIISGGWCGWKTREQVF KDSVFYNLCMPQLSSEGV

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0111530234 SDTLKSEEKT0.993unspNF0111530234 SDTLKSEEKT0.993unspNF0111530234 SDTLKSEEKT0.993unspNF0111530278 SRGRESTIES0.998unspNF0111530216 SNSDQSMTET0.997unspNF0111530227 SKHIDSYIDT0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India