NF0111770 | ubiquitin carboxyl-terminal hydrolase 5 isoform x2

_IDPredictionOTHERSPmTPCS_Position
NF0111770OTHER0.9995170.0000550.000428
No Results

  • Fasta :-

    >NF0111770 MQQTQHVNVSSLKFDFSKINIPNQLTPIHKEECCVSFDTPKSEGGLNVCLNTFLAFSQKF VRKHFELTGNSVFLNIKRIKKWTPPEEKKLEEVPTKMAIGVEGGFNIKEEEEDDKDQYDE LLSLVLLEPNNVVIPLPNNDLPEKVKLSIKGVLENQAVERKKEVLQWEGEPLTEGKHTLT LKQVGDVKIPPSGWKCSQCDITDNLWLNLSDGHIGCGRKFWDGSGGNNHAVEHYQQTGFP VCVKLGTIQLDENGEPKADVYSYAEDKMVKDSKLVEHLEYFGINIREMKKTAKTLAEMEL DQNLNFDFTRIQESDKNLQPLYGPGFTGMKNIGNSCYLASVMQTLFSLPEFQKRYYDREM SCYTSTSSIDTLSLQMAKLAYGLLSGEYSREEFDENNERRYQEGIPPRSFKSVVGKGHAE FSTMRQQDSVEFYQYLLQLIEREDKRVGFENSITHLFNFKVEERIECSESKKVKYTHRKD NLLSLPVPLSAATNKAEYEEFCKREKEREAKEKELGVVQNVNSRPLGTTSEKKEVVRPKV PLSKCLEAFAEVDAVENFYSSALGRKTIGLKQTKLSTFPDYLFVQIRKFVLDGWVPKKLD VFITDAEELDLTSIRGTGLKPNEQELPSDEPKQESIYIDMQIVQSLVEMGIPENRAKRGA WKTNNVGLDAAMDWVFDHSGDADIDEPIPEPSKKQSGNASSNAPSDSDVEAIMNLGFPKE HAVVALKQTSNNIERAAEWLFSHMDDIDQYLREETSASTVTAKVEKHETFSDGSGKYELI GFVSHIGANTGCGHYVCHLKREVEGQQKWVLYNDSKVLVSENPPFDMGYLYLYKRK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0111770.fa Sequence name : NF0111770 Sequence length : 836 VALUES OF COMPUTED PARAMETERS Coef20 : 3.791 CoefTot : -2.003 ChDiff : -26 ZoneTo : 30 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.129 1.400 0.102 0.540 MesoH : -0.595 0.141 -0.399 0.123 MuHd_075 : 22.339 13.750 7.316 4.502 MuHd_095 : 13.889 12.147 5.214 3.655 MuHd_100 : 15.845 13.941 4.898 3.786 MuHd_105 : 14.990 16.387 6.298 4.648 Hmax_075 : 14.800 12.600 2.807 4.390 Hmax_095 : -0.525 7.600 -1.143 3.120 Hmax_100 : 1.500 7.700 -1.937 3.320 Hmax_105 : 7.233 9.567 -0.017 3.605 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9889 0.0111 DFMC : 0.9848 0.0152
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 836 NF0111770 MQQTQHVNVSSLKFDFSKINIPNQLTPIHKEECCVSFDTPKSEGGLNVCLNTFLAFSQKFVRKHFELTGNSVFLNIKRIK 80 KWTPPEEKKLEEVPTKMAIGVEGGFNIKEEEEDDKDQYDELLSLVLLEPNNVVIPLPNNDLPEKVKLSIKGVLENQAVER 160 KKEVLQWEGEPLTEGKHTLTLKQVGDVKIPPSGWKCSQCDITDNLWLNLSDGHIGCGRKFWDGSGGNNHAVEHYQQTGFP 240 VCVKLGTIQLDENGEPKADVYSYAEDKMVKDSKLVEHLEYFGINIREMKKTAKTLAEMELDQNLNFDFTRIQESDKNLQP 320 LYGPGFTGMKNIGNSCYLASVMQTLFSLPEFQKRYYDREMSCYTSTSSIDTLSLQMAKLAYGLLSGEYSREEFDENNERR 400 YQEGIPPRSFKSVVGKGHAEFSTMRQQDSVEFYQYLLQLIEREDKRVGFENSITHLFNFKVEERIECSESKKVKYTHRKD 480 NLLSLPVPLSAATNKAEYEEFCKREKEREAKEKELGVVQNVNSRPLGTTSEKKEVVRPKVPLSKCLEAFAEVDAVENFYS 560 SALGRKTIGLKQTKLSTFPDYLFVQIRKFVLDGWVPKKLDVFITDAEELDLTSIRGTGLKPNEQELPSDEPKQESIYIDM 640 QIVQSLVEMGIPENRAKRGAWKTNNVGLDAAMDWVFDHSGDADIDEPIPEPSKKQSGNASSNAPSDSDVEAIMNLGFPKE 720 HAVVALKQTSNNIERAAEWLFSHMDDIDQYLREETSASTVTAKVEKHETFSDGSGKYELIGFVSHIGANTGCGHYVCHLK 800 REVEGQQKWVLYNDSKVLVSENPPFDMGYLYLYKRK 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..........P..................................................................... 480 ................................................................................ 560 ................................................................................ 640 .................P.............................................................. 720 ................................................................................ 800 .................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ NF0111770 13 VNVSSLK|FD 0.067 . NF0111770 18 LKFDFSK|IN 0.072 . NF0111770 30 QLTPIHK|EE 0.058 . NF0111770 41 VSFDTPK|SE 0.084 . NF0111770 59 FLAFSQK|FV 0.103 . NF0111770 62 FSQKFVR|KH 0.090 . NF0111770 63 SQKFVRK|HF 0.115 . NF0111770 77 SVFLNIK|RI 0.058 . NF0111770 78 VFLNIKR|IK 0.117 . NF0111770 80 LNIKRIK|KW 0.070 . NF0111770 81 NIKRIKK|WT 0.309 . NF0111770 88 WTPPEEK|KL 0.064 . NF0111770 89 TPPEEKK|LE 0.093 . NF0111770 96 LEEVPTK|MA 0.100 . NF0111770 108 EGGFNIK|EE 0.058 . NF0111770 115 EEEEDDK|DQ 0.073 . NF0111770 144 NNDLPEK|VK 0.055 . NF0111770 146 DLPEKVK|LS 0.063 . NF0111770 150 KVKLSIK|GV 0.075 . NF0111770 160 ENQAVER|KK 0.105 . NF0111770 161 NQAVERK|KE 0.072 . NF0111770 162 QAVERKK|EV 0.166 . NF0111770 176 EPLTEGK|HT 0.063 . NF0111770 182 KHTLTLK|QV 0.087 . NF0111770 188 KQVGDVK|IP 0.057 . NF0111770 195 IPPSGWK|CS 0.058 . NF0111770 218 GHIGCGR|KF 0.091 . NF0111770 219 HIGCGRK|FW 0.118 . NF0111770 244 GFPVCVK|LG 0.059 . NF0111770 257 DENGEPK|AD 0.062 . NF0111770 267 YSYAEDK|MV 0.078 . NF0111770 270 AEDKMVK|DS 0.070 . NF0111770 273 KMVKDSK|LV 0.085 . NF0111770 286 YFGINIR|EM 0.069 . NF0111770 289 INIREMK|KT 0.154 . NF0111770 290 NIREMKK|TA 0.103 . NF0111770 293 EMKKTAK|TL 0.071 . NF0111770 310 LNFDFTR|IQ 0.086 . NF0111770 316 RIQESDK|NL 0.064 . NF0111770 330 PGFTGMK|NI 0.060 . NF0111770 353 SLPEFQK|RY 0.067 . NF0111770 354 LPEFQKR|YY 0.272 . NF0111770 358 QKRYYDR|EM 0.136 . NF0111770 378 LSLQMAK|LA 0.068 . NF0111770 390 LSGEYSR|EE 0.081 . NF0111770 399 FDENNER|RY 0.079 . NF0111770 400 DENNERR|YQ 0.245 . NF0111770 408 QEGIPPR|SF 0.137 . NF0111770 411 IPPRSFK|SV 0.599 *ProP* NF0111770 416 FKSVVGK|GH 0.080 . NF0111770 425 AEFSTMR|QQ 0.097 . NF0111770 442 LLQLIER|ED 0.083 . NF0111770 445 LIEREDK|RV 0.144 . NF0111770 446 IEREDKR|VG 0.121 . NF0111770 460 THLFNFK|VE 0.066 . NF0111770 464 NFKVEER|IE 0.070 . NF0111770 471 IECSESK|KV 0.065 . NF0111770 472 ECSESKK|VK 0.115 . NF0111770 474 SESKKVK|YT 0.108 . NF0111770 478 KVKYTHR|KD 0.070 . NF0111770 479 VKYTHRK|DN 0.104 . NF0111770 495 LSAATNK|AE 0.068 . NF0111770 503 EYEEFCK|RE 0.054 . NF0111770 504 YEEFCKR|EK 0.147 . NF0111770 506 EFCKREK|ER 0.065 . NF0111770 508 CKREKER|EA 0.181 . NF0111770 511 EKEREAK|EK 0.158 . NF0111770 513 EREAKEK|EL 0.104 . NF0111770 524 VQNVNSR|PL 0.094 . NF0111770 532 LGTTSEK|KE 0.053 . NF0111770 533 GTTSEKK|EV 0.090 . NF0111770 537 EKKEVVR|PK 0.082 . NF0111770 539 KEVVRPK|VP 0.058 . NF0111770 544 PKVPLSK|CL 0.065 . NF0111770 565 YSSALGR|KT 0.116 . NF0111770 566 SSALGRK|TI 0.102 . NF0111770 571 RKTIGLK|QT 0.057 . NF0111770 574 IGLKQTK|LS 0.054 . NF0111770 587 YLFVQIR|KF 0.076 . NF0111770 588 LFVQIRK|FV 0.104 . NF0111770 597 LDGWVPK|KL 0.075 . NF0111770 598 DGWVPKK|LD 0.081 . NF0111770 615 LDLTSIR|GT 0.105 . NF0111770 620 IRGTGLK|PN 0.083 . NF0111770 632 LPSDEPK|QE 0.099 . NF0111770 655 MGIPENR|AK 0.091 . NF0111770 657 IPENRAK|RG 0.067 . NF0111770 658 PENRAKR|GA 0.711 *ProP* NF0111770 662 AKRGAWK|TN 0.078 . NF0111770 693 PIPEPSK|KQ 0.054 . NF0111770 694 IPEPSKK|QS 0.151 . NF0111770 719 MNLGFPK|EH 0.061 . NF0111770 727 HAVVALK|QT 0.067 . NF0111770 735 TSNNIER|AA 0.177 . NF0111770 752 DIDQYLR|EE 0.062 . NF0111770 763 ASTVTAK|VE 0.062 . NF0111770 766 VTAKVEK|HE 0.066 . NF0111770 776 FSDGSGK|YE 0.070 . NF0111770 800 HYVCHLK|RE 0.058 . NF0111770 801 YVCHLKR|EV 0.452 . NF0111770 808 EVEGQQK|WV 0.062 . NF0111770 816 VLYNDSK|VL 0.059 . NF0111770 834 GYLYLYK|RK 0.056 . NF0111770 835 YLYLYKR|K- 0.138 . NF0111770 836 LYLYKRK|-- 0.084 . ____________________________^_________________

  • Fasta :-

    >NF0111770 ATGCAACAAACACAACACGTGAATGTTTCCTCTTTGAAGTTTGATTTTAGCAAGATCAAC ATTCCTAATCAACTCACCCCGATCCACAAGGAAGAATGTTGTGTTTCTTTTGATACACCA AAATCCGAAGGAGGCTTGAACGTTTGCTTGAACACATTTTTAGCCTTTTCTCAAAAGTTT GTCAGAAAACATTTTGAATTAACTGGTAACAGTGTATTTTTGAATATTAAGAGAATTAAG AAATGGACACCACCTGAAGAGAAGAAGCTTGAAGAAGTTCCAACCAAAATGGCCATCGGT GTAGAGGGAGGGTTTAATATCAAAGAGGAAGAGGAAGATGACAAAGATCAGTATGATGAA TTGTTATCTTTGGTGCTATTGGAGCCAAACAATGTTGTCATTCCATTGCCTAACAATGAT CTACCAGAGAAAGTCAAACTCTCCATCAAAGGTGTTTTAGAAAATCAAGCTGTAGAACGT AAGAAGGAAGTATTGCAATGGGAGGGCGAGCCATTGACTGAAGGAAAACACACTTTGACC TTGAAACAAGTTGGAGATGTGAAGATCCCTCCATCTGGTTGGAAATGTAGTCAATGTGAT ATTACTGACAATTTGTGGTTGAATCTTAGCGATGGACATATTGGATGTGGAAGAAAATTC TGGGATGGCAGCGGAGGAAATAATCATGCTGTTGAACATTATCAACAAACAGGATTTCCT GTTTGTGTAAAGCTTGGAACTATTCAATTAGATGAAAATGGTGAACCTAAAGCAGATGTA TACTCATATGCAGAGGATAAAATGGTTAAAGATTCCAAATTAGTTGAACATTTAGAATAC TTTGGAATTAATATTAGAGAAATGAAAAAGACTGCAAAAACATTGGCTGAAATGGAACTT GACCAAAATTTAAATTTTGATTTTACAAGAATTCAAGAGAGTGACAAGAATTTACAACCT CTTTATGGACCAGGATTTACAGGAATGAAAAACATTGGTAACTCATGCTATTTGGCCAGT GTGATGCAAACTCTATTTTCGCTTCCAGAATTCCAAAAGAGATATTACGACAGAGAAATG TCATGTTATACATCAACAAGCTCAATTGATACTCTTTCACTTCAAATGGCAAAATTAGCA TACGGATTGTTATCGGGTGAATACTCAAGAGAAGAGTTTGATGAAAATAACGAACGAAGA TATCAAGAGGGAATTCCACCAAGATCATTCAAAAGTGTTGTTGGAAAGGGACATGCAGAA TTCAGTACTATGAGACAACAAGATTCAGTTGAGTTTTACCAATATCTTTTACAACTTATT GAACGTGAAGACAAGAGAGTTGGGTTTGAAAATTCTATTACTCATCTTTTCAATTTTAAA GTCGAAGAAAGAATTGAATGCTCTGAATCAAAGAAGGTTAAATATACTCACAGAAAAGAC AATTTACTTTCTCTTCCAGTTCCTCTTTCTGCTGCCACAAACAAGGCTGAGTATGAAGAA TTCTGTAAGCGAGAGAAGGAGAGAGAAGCTAAAGAGAAAGAACTCGGAGTTGTTCAAAAT GTGAATAGTAGACCTCTCGGTACCACAAGTGAAAAGAAAGAAGTAGTTAGACCAAAAGTT CCACTATCGAAATGTCTTGAGGCGTTTGCTGAGGTTGATGCAGTTGAGAATTTCTATAGC TCAGCACTTGGAAGAAAGACAATTGGTTTGAAACAAACCAAATTATCAACATTCCCAGAT TATTTGTTTGTCCAAATTAGAAAGTTTGTTTTGGATGGATGGGTTCCAAAGAAATTGGAC GTTTTTATTACAGATGCAGAAGAGTTGGATTTGACAAGTATTAGAGGAACTGGTTTGAAA CCAAACGAGCAAGAGCTACCATCGGACGAGCCAAAACAAGAATCTATTTACATTGACATG CAAATTGTTCAAAGTCTTGTTGAAATGGGTATTCCAGAAAATAGAGCCAAGAGAGGAGCT TGGAAAACAAATAATGTTGGCCTGGATGCTGCAATGGATTGGGTGTTTGATCATTCAGGA GATGCAGATATTGATGAGCCTATTCCAGAACCTTCCAAGAAGCAATCTGGTAATGCTTCA TCCAATGCACCAAGTGACTCGGATGTGGAGGCAATCATGAACCTTGGTTTTCCAAAAGAG CATGCTGTTGTTGCTCTCAAGCAAACCTCAAACAATATTGAACGAGCTGCCGAATGGCTC TTCAGCCACATGGATGACATTGATCAGTATTTGAGGGAAGAGACCTCAGCTAGCACTGTT ACTGCCAAAGTGGAGAAGCATGAAACATTTTCTGATGGCTCTGGAAAATATGAATTAATT GGATTTGTCAGTCACATTGGAGCCAATACTGGATGTGGTCACTACGTTTGCCATTTAAAG CGAGAGGTTGAAGGACAGCAGAAATGGGTCTTGTATAATGATAGTAAGGTACTGGTTAGT GAAAACCCTCCATTCGATATGGGTTACCTTTATCTCTACAAGAGGAAATAG
  • Download Fasta

  • Fasta :-

    MQQTQHVNVSSLKFDFSKINIPNQLTPIHKEECCVSFDTPKSEGGLNVCLNTFLAFSQKF VRKHFELTGNSVFLNIKRIKKWTPPEEKKLEEVPTKMAIGVEGGFNIKEEEEDDKDQYDE LLSLVLLEPNNVVIPLPNNDLPEKVKLSIKGVLENQAVERKKEVLQWEGEPLTEGKHTLT LKQVGDVKIPPSGWKCSQCDITDNLWLNLSDGHIGCGRKFWDGSGGNNHAVEHYQQTGFP VCVKLGTIQLDENGEPKADVYSYAEDKMVKDSKLVEHLEYFGINIREMKKTAKTLAEMEL DQNLNFDFTRIQESDKNLQPLYGPGFTGMKNIGNSCYLASVMQTLFSLPEFQKRYYDREM SCYTSTSSIDTLSLQMAKLAYGLLSGEYSREEFDENNERRYQEGIPPRSFKSVVGKGHAE FSTMRQQDSVEFYQYLLQLIEREDKRVGFENSITHLFNFKVEERIECSESKKVKYTHRKD NLLSLPVPLSAATNKAEYEEFCKREKEREAKEKELGVVQNVNSRPLGTTSEKKEVVRPKV PLSKCLEAFAEVDAVENFYSSALGRKTIGLKQTKLSTFPDYLFVQIRKFVLDGWVPKKLD VFITDAEELDLTSIRGTGLKPNEQELPSDEPKQESIYIDMQIVQSLVEMGIPENRAKRGA WKTNNVGLDAAMDWVFDHSGDADIDEPIPEPSKKQSGNASSNAPSDSDVEAIMNLGFPKE HAVVALKQTSNNIERAAEWLFSHMDDIDQYLREETSASTVTAKVEKHETFSDGSGKYELI GFVSHIGANTGCGHYVCHLKREVEGQQKWVLYNDSKVLVSENPPFDMGYLYLYKRK

  • title: Active Site
  • coordinates: N331,C336,H794,D814
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0111770389 SSGEYSREEF0.992unspNF0111770705 SSNAPSDSDV0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India