NF0116430 | lysosomal protective

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004185      

  • Computed_GO_Functions:  serine-type carboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0116430SP0.0009840.9990080.000008CS pos: 20-21. VHS-TT. Pr: 0.7388
No Results

  • Fasta :-

    >NF0116430 MKFLPLLFLLLAQWLLVVHSTTESGLFILGSGVAAAVAAAPPPQRITSLPGFNGPISFSQ YSGYVPVSINSTYETRFLFYWFVESQSARPSEDPVILWLNGGPGCSSLDGMVTEHGPFLL NNDGKTLRANDYSWNKRANIIYLESPFEVGYSFTTNNNDHVWNDVKSANDVLQFLAIFFS EMFPQYVKNPFYIAAESYGGHYGPTTAVAVLHANQRNQFPFKFNLKGFIVANGIMDDRED TNSIPLFMYQHSLISKSSYDDGLSKCKGDFYKNQNLPECANVISQYYTSIVGVNPYDIYA NCVGDVGPFVDEKSDEFSQKEESFLETLKRNGWMKALTQRPSFKNSNVIIHPLFALSTTR VGSGAPCLAYKPQENWFNLNEVKQALHASPLIPQDHRWQMCNDVVNGNYNRTYDSMIPFY QELLSNGIRGLFYSGDCDLAVNSLGSQNGIYALMKVMNGQIVKPYQSWMMDKQVAGFYQI WSAGSTTMTFKTIKGAGHMVPMTRPKQAQTVLYDFIFNN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0116430.fa Sequence name : NF0116430 Sequence length : 519 VALUES OF COMPUTED PARAMETERS Coef20 : 4.467 CoefTot : -1.588 ChDiff : -5 ZoneTo : 73 KR : 2 DE : 1 CleavSite : 47 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.847 2.176 0.349 0.806 MesoH : 0.762 0.782 -0.060 0.426 MuHd_075 : 20.080 17.762 7.522 5.527 MuHd_095 : 19.442 15.808 6.276 4.246 MuHd_100 : 19.965 15.403 5.592 5.037 MuHd_105 : 20.146 15.860 6.102 5.694 Hmax_075 : 16.363 16.450 2.934 5.623 Hmax_095 : 10.000 16.975 3.495 7.534 Hmax_100 : 20.900 21.700 3.776 7.510 Hmax_105 : 17.800 11.300 3.059 5.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7839 0.2161 DFMC : 0.7785 0.2215
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 519 NF0116430 MKFLPLLFLLLAQWLLVVHSTTESGLFILGSGVAAAVAAAPPPQRITSLPGFNGPISFSQYSGYVPVSINSTYETRFLFY 80 WFVESQSARPSEDPVILWLNGGPGCSSLDGMVTEHGPFLLNNDGKTLRANDYSWNKRANIIYLESPFEVGYSFTTNNNDH 160 VWNDVKSANDVLQFLAIFFSEMFPQYVKNPFYIAAESYGGHYGPTTAVAVLHANQRNQFPFKFNLKGFIVANGIMDDRED 240 TNSIPLFMYQHSLISKSSYDDGLSKCKGDFYKNQNLPECANVISQYYTSIVGVNPYDIYANCVGDVGPFVDEKSDEFSQK 320 EESFLETLKRNGWMKALTQRPSFKNSNVIIHPLFALSTTRVGSGAPCLAYKPQENWFNLNEVKQALHASPLIPQDHRWQM 400 CNDVVNGNYNRTYDSMIPFYQELLSNGIRGLFYSGDCDLAVNSLGSQNGIYALMKVMNGQIVKPYQSWMMDKQVAGFYQI 480 WSAGSTTMTFKTIKGAGHMVPMTRPKQAQTVLYDFIFNN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0116430 2 -----MK|FL 0.063 . NF0116430 45 AAPPPQR|IT 0.088 . NF0116430 76 NSTYETR|FL 0.093 . NF0116430 89 VESQSAR|PS 0.123 . NF0116430 125 LLNNDGK|TL 0.075 . NF0116430 128 NDGKTLR|AN 0.092 . NF0116430 136 NDYSWNK|RA 0.061 . NF0116430 137 DYSWNKR|AN 0.220 . NF0116430 166 HVWNDVK|SA 0.104 . NF0116430 188 MFPQYVK|NP 0.053 . NF0116430 216 VLHANQR|NQ 0.083 . NF0116430 222 RNQFPFK|FN 0.083 . NF0116430 226 PFKFNLK|GF 0.064 . NF0116430 238 NGIMDDR|ED 0.079 . NF0116430 256 QHSLISK|SS 0.087 . NF0116430 265 YDDGLSK|CK 0.064 . NF0116430 267 DGLSKCK|GD 0.062 . NF0116430 272 CKGDFYK|NQ 0.063 . NF0116430 313 GPFVDEK|SD 0.091 . NF0116430 320 SDEFSQK|EE 0.075 . NF0116430 329 SFLETLK|RN 0.060 . NF0116430 330 FLETLKR|NG 0.148 . NF0116430 335 KRNGWMK|AL 0.086 . NF0116430 340 MKALTQR|PS 0.099 . NF0116430 344 TQRPSFK|NS 0.083 . NF0116430 360 FALSTTR|VG 0.074 . NF0116430 371 APCLAYK|PQ 0.066 . NF0116430 383 FNLNEVK|QA 0.064 . NF0116430 397 LIPQDHR|WQ 0.070 . NF0116430 411 VNGNYNR|TY 0.088 . NF0116430 429 LLSNGIR|GL 0.111 . NF0116430 455 GIYALMK|VM 0.062 . NF0116430 463 MNGQIVK|PY 0.064 . NF0116430 472 QSWMMDK|QV 0.081 . NF0116430 491 STTMTFK|TI 0.080 . NF0116430 494 MTFKTIK|GA 0.100 . NF0116430 504 HMVPMTR|PK 0.091 . NF0116430 506 VPMTRPK|QA 0.097 . ____________________________^_________________

  • Fasta :-

    >NF0116430 ATGAAATTCCTTCCTTTGCTGTTCTTGTTGCTGGCACAATGGCTTCTCGTTGTGCATTCA ACAACGGAATCGGGGTTATTCATCCTTGGTTCTGGTGTTGCTGCTGCTGTTGCTGCTGCT CCTCCTCCTCAACGTATCACTTCTCTCCCTGGTTTCAATGGTCCCATTTCCTTTTCTCAA TATTCGGGTTACGTTCCAGTGAGTATCAATTCCACCTATGAAACGAGATTTTTGTTTTAT TGGTTTGTTGAGTCGCAAAGTGCTCGTCCCAGTGAGGATCCAGTGATTTTGTGGTTGAAT GGTGGACCAGGTTGTAGCAGTTTGGATGGAATGGTCACAGAACATGGTCCATTTCTTCTC AACAATGATGGAAAAACTTTGAGAGCAAATGATTATTCTTGGAATAAGAGAGCAAATATC ATTTATTTAGAATCTCCCTTTGAAGTCGGATATAGTTTTACAACCAATAATAATGATCAT GTTTGGAATGATGTGAAATCAGCAAATGATGTGTTACAATTTTTAGCAATTTTCTTCTCT GAAATGTTTCCACAATATGTGAAAAATCCATTTTATATTGCTGCAGAATCTTATGGAGGA CATTATGGGCCAACCACTGCTGTAGCAGTTTTACATGCCAATCAAAGAAATCAATTTCCA TTCAAATTCAATTTGAAAGGTTTCATTGTCGCTAATGGTATCATGGATGATCGAGAAGAC ACCAATTCCATTCCTCTCTTCATGTATCAACATTCTCTCATTTCCAAATCATCCTACGAC GATGGTTTATCAAAATGCAAAGGTGATTTTTACAAGAATCAAAATTTACCAGAATGTGCC AATGTCATTTCTCAATACTACACGTCCATTGTGGGTGTCAATCCCTATGATATTTATGCA AACTGTGTGGGAGATGTTGGACCATTTGTTGACGAGAAAAGTGATGAATTTTCACAGAAA GAAGAATCTTTTTTGGAAACTTTGAAACGTAATGGATGGATGAAAGCTCTCACTCAAAGA CCATCCTTTAAGAACAGCAATGTCATCATTCATCCATTGTTTGCACTGAGTACAACTCGT GTGGGAAGTGGTGCTCCTTGTCTTGCTTACAAGCCACAAGAAAATTGGTTTAATTTGAAT GAAGTGAAACAAGCACTTCATGCCTCTCCATTAATTCCACAAGATCATCGTTGGCAAATG TGTAATGATGTGGTGAATGGTAATTACAATCGAACGTATGATAGTATGATTCCATTCTAT CAGGAATTGTTATCGAATGGCATTCGAGGGTTGTTTTACTCGGGTGATTGTGATTTGGCT GTGAATTCTCTTGGATCTCAGAATGGAATTTATGCATTGATGAAGGTGATGAATGGACAA ATTGTAAAACCCTATCAATCTTGGATGATGGATAAACAGGTGGCTGGTTTTTATCAAATT TGGAGTGCTGGATCCACCACCATGACATTTAAGACCATTAAGGGAGCAGGACACATGGTA CCAATGACTCGACCAAAACAAGCTCAAACAGTCTTGTATGATTTTATTTTCAACAATTAA
  • Download Fasta

  • Fasta :-

    MKFLPLLFLLLAQWLLVVHSTTESGLFILGSGVAAAVAAAPPPQRITSLPGFNGPISFSQ YSGYVPVSINSTYETRFLFYWFVESQSARPSEDPVILWLNGGPGCSSLDGMVTEHGPFLL NNDGKTLRANDYSWNKRANIIYLESPFEVGYSFTTNNNDHVWNDVKSANDVLQFLAIFFS EMFPQYVKNPFYIAAESYGGHYGPTTAVAVLHANQRNQFPFKFNLKGFIVANGIMDDRED TNSIPLFMYQHSLISKSSYDDGLSKCKGDFYKNQNLPECANVISQYYTSIVGVNPYDIYA NCVGDVGPFVDEKSDEFSQKEESFLETLKRNGWMKALTQRPSFKNSNVIIHPLFALSTTR VGSGAPCLAYKPQENWFNLNEVKQALHASPLIPQDHRWQMCNDVVNGNYNRTYDSMIPFY QELLSNGIRGLFYSGDCDLAVNSLGSQNGIYALMKVMNGQIVKPYQSWMMDKQVAGFYQI WSAGSTTMTFKTIKGAGHMVPMTRPKQAQTVLYDFIFNN

    No Results
IDSitePositionGscoreIscore
NF0116430T470.5010.322
IDSitePositionGscoreIscore
NF0116430T470.5010.322
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0116430258 SISKSSYDDG0.993unspNF0116430258 SISKSSYDDG0.993unspNF0116430258 SISKSSYDDG0.993unspNF0116430318 SSDEFSQKEE0.997unspNF011643071 SVSINSTYET0.993unspNF0116430257 SLISKSSYDD0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India