NF0127480 | silent information regulator protein sir2

UniProt_ID:

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Curated_GO_Component_IDs:
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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0127480	OTHER	0.645841	0.353918	0.000242

No Results

Fasta :-
>NF0127480 MLYWLLGSLPFVFLFSFAYYKQNWLLYCNYMPRGQARVLEYLPSIFNLPFEDIMLDTLDG KAKIHCWFLRYMPSGGSLDSSFLQHKKSTDKANNDEDAIFSFHHSSSSNATTSSPSSSAS QGNNNSSSGDNLSQQDTKKKIKKGTSSMMLQYKKQLQYTPTIIMFHGNAGNISHRLTNAR DMYRSCKCNILMVEYRGYGRSTGEPSEEGLKNDAETAIRYLLEKRSDINPNNIFIFGRSL GGAVAIFLAAKYANVIRGVIVENTFISVPKLIPSLFPYRFAVPVLQYLCINKWDNETILR SATFRNDFHRKRLNGDLPFLFISGRKDELIPPEHMDTLIEIYCERYGDYCYVKRFEEGTH YGTWLCPGYYLNLYRFIKKFRVNPPSVSETRSRKASSSTTSVKPHIPTSSTDQIHTSGDD IVIHENITLTYADSLTIPPENHHGSGHNSGTSSGANSGDNTPRKKGTYMFR
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0127480.fa Sequence name : NF0127480 Sequence length : 471 VALUES OF COMPUTED PARAMETERS Coef20 : 4.253 CoefTot : -0.730 ChDiff : 11 ZoneTo : 39 KR : 3 DE : 0 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.235 1.918 0.269 0.785 MesoH : -0.135 0.768 -0.222 0.330 MuHd_075 : 26.890 13.664 5.027 6.307 MuHd_095 : 31.149 13.437 6.550 6.429 MuHd_100 : 34.233 16.005 7.971 7.019 MuHd_105 : 30.289 15.934 7.529 5.985 Hmax_075 : 8.167 9.917 -0.199 4.070 Hmax_095 : 3.900 20.400 -1.317 3.260 Hmax_100 : 8.600 6.700 0.211 3.350 Hmax_105 : 11.900 11.100 1.822 4.177 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4219 0.5781 DFMC : 0.3141 0.6859 This protein is probably imported in mitochondria. f(Ser) = 0.0513 f(Arg) = 0.0513 CMi = 0.36166 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 471 NF0127480 MLYWLLGSLPFVFLFSFAYYKQNWLLYCNYMPRGQARVLEYLPSIFNLPFEDIMLDTLDGKAKIHCWFLRYMPSGGSLDS 80 SFLQHKKSTDKANNDEDAIFSFHHSSSSNATTSSPSSSASQGNNNSSSGDNLSQQDTKKKIKKGTSSMMLQYKKQLQYTP 160 TIIMFHGNAGNISHRLTNARDMYRSCKCNILMVEYRGYGRSTGEPSEEGLKNDAETAIRYLLEKRSDINPNNIFIFGRSL 240 GGAVAIFLAAKYANVIRGVIVENTFISVPKLIPSLFPYRFAVPVLQYLCINKWDNETILRSATFRNDFHRKRLNGDLPFL 320 FISGRKDELIPPEHMDTLIEIYCERYGDYCYVKRFEEGTHYGTWLCPGYYLNLYRFIKKFRVNPPSVSETRSRKASSSTT 400 SVKPHIPTSSTDQIHTSGDDIVIHENITLTYADSLTIPPENHHGSGHNSGTSSGANSGDNTPRKKGTYMFR 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0127480 21 FSFAYYK|QN 0.057 . NF0127480 33 YCNYMPR|GQ 0.101 . NF0127480 37 MPRGQAR|VL 0.157 . NF0127480 61 LDTLDGK|AK 0.058 . NF0127480 63 TLDGKAK|IH 0.076 . NF0127480 70 IHCWFLR|YM 0.107 . NF0127480 86 SSFLQHK|KS 0.065 . NF0127480 87 SFLQHKK|ST 0.207 . NF0127480 91 HKKSTDK|AN 0.068 . NF0127480 138 LSQQDTK|KK 0.072 . NF0127480 139 SQQDTKK|KI 0.158 . NF0127480 140 QQDTKKK|IK 0.095 . NF0127480 142 DTKKKIK|KG 0.064 . NF0127480 143 TKKKIKK|GT 0.173 . NF0127480 153 SMMLQYK|KQ 0.071 . NF0127480 154 MMLQYKK|QL 0.085 . NF0127480 175 AGNISHR|LT 0.091 . NF0127480 180 HRLTNAR|DM 0.119 . NF0127480 184 NARDMYR|SC 0.124 . NF0127480 187 DMYRSCK|CN 0.108 . NF0127480 196 ILMVEYR|GY 0.145 . NF0127480 200 EYRGYGR|ST 0.116 . NF0127480 211 PSEEGLK|ND 0.049 . NF0127480 219 DAETAIR|YL 0.083 . NF0127480 224 IRYLLEK|RS 0.066 . NF0127480 225 RYLLEKR|SD 0.151 . NF0127480 238 NIFIFGR|SL 0.229 . NF0127480 251 AIFLAAK|YA 0.080 . NF0127480 257 KYANVIR|GV 0.149 . NF0127480 270 TFISVPK|LI 0.066 . NF0127480 279 PSLFPYR|FA 0.114 . NF0127480 292 QYLCINK|WD 0.055 . NF0127480 300 DNETILR|SA 0.100 . NF0127480 305 LRSATFR|ND 0.104 . NF0127480 310 FRNDFHR|KR 0.095 . NF0127480 311 RNDFHRK|RL 0.095 . NF0127480 312 NDFHRKR|LN 0.202 . NF0127480 325 FLFISGR|KD 0.086 . NF0127480 326 LFISGRK|DE 0.070 . NF0127480 345 IEIYCER|YG 0.077 . NF0127480 353 GDYCYVK|RF 0.070 . NF0127480 354 DYCYVKR|FE 0.170 . NF0127480 375 YYLNLYR|FI 0.098 . NF0127480 378 NLYRFIK|KF 0.127 . NF0127480 379 LYRFIKK|FR 0.080 . NF0127480 381 RFIKKFR|VN 0.094 . NF0127480 391 PSVSETR|SR 0.119 . NF0127480 393 VSETRSR|KA 0.125 . NF0127480 394 SETRSRK|AS 0.246 . NF0127480 403 SSTTSVK|PH 0.065 . NF0127480 463 SGDNTPR|KK 0.110 . NF0127480 464 GDNTPRK|KG 0.089 . NF0127480 465 DNTPRKK|GT 0.098 . NF0127480 471 KGTYMFR|-- 0.093 . ____________________________^_________________

Fasta :-
>NF0127480 ATGCTGTATTGGTTATTAGGCTCTTTACCTTTTGTTTTTCTCTTTTCATTTGCCTATTAC AAACAGAATTGGCTGTTATATTGCAATTATATGCCCCGAGGACAGGCCAGAGTCCTCGAA TATTTACCTTCAATATTCAATCTACCCTTTGAAGATATCATGTTAGATACACTGGATGGA AAAGCAAAAATCCATTGCTGGTTTCTGAGATATATGCCATCAGGTGGATCTCTTGATTCT TCTTTCTTACAACATAAAAAGTCAACGGACAAGGCTAACAATGATGAAGATGCCATCTTT TCGTTTCATCATTCGAGCAGCAGTAATGCCACAACGTCGTCCCCTTCATCATCAGCATCA CAAGGAAACAACAACTCATCATCAGGCGATAATTTATCACAACAAGACACAAAGAAAAAG ATCAAGAAGGGAACTTCAAGTATGATGTTGCAGTACAAGAAACAACTTCAGTACACTCCA ACAATTATCATGTTTCATGGCAATGCTGGAAATATTTCACATCGATTGACAAATGCTAGA GACATGTATCGCTCATGTAAATGTAATATACTTATGGTAGAATATAGAGGTTATGGACGA AGTACAGGAGAACCATCAGAAGAGGGTTTAAAGAATGATGCAGAAACAGCCATTCGATAT TTATTGGAGAAAAGGTCGGACATTAATCCAAACAATATTTTTATATTCGGAAGAAGTCTT GGTGGAGCTGTGGCAATCTTTCTCGCTGCAAAATATGCCAATGTAATTCGAGGAGTTATT GTTGAAAATACTTTTATTTCAGTACCTAAACTGATTCCTTCACTATTTCCATATCGATTT GCGGTTCCAGTTTTGCAATATTTATGCATTAATAAGTGGGATAATGAAACAATTTTGAGA AGTGCTACATTCAGAAATGATTTCCACAGAAAGAGATTGAATGGTGACTTGCCCTTTTTA TTTATCAGCGGCAGAAAAGACGAGTTAATACCTCCAGAACACATGGATACTCTGATTGAA ATTTATTGTGAACGTTACGGAGATTATTGTTATGTCAAACGATTCGAAGAGGGCACTCAT TACGGAACGTGGTTATGTCCTGGATACTATCTCAATTTATATCGATTTATCAAAAAGTTT AGAGTCAATCCACCTTCAGTCTCAGAAACTAGATCAAGAAAGGCATCCTCATCAACAACA AGTGTTAAGCCTCACATTCCAACATCTTCAACAGATCAAATTCACACTTCAGGCGATGAT ATTGTGATTCATGAAAACATCACACTTACATATGCAGATTCGCTTACAATTCCTCCCGAG AACCACCACGGAAGTGGCCATAACAGTGGCACAAGTAGTGGTGCTAATAGCGGAGACAAC ACACCAAGAAAAAAGGGAACCTATATGTTCAGATAAGAAAACACTCAAAAGAGAGAATTT GAGTCTCAATTTTGGAAACTTGAAAAAAATGAAAAAACGTAAAATCGAAGTTAATTCGGA GAGTTATTATTTATCATCCATGATTGACTTTATCAAAGTGGAATTGGAGAAACAAAATTT TGAAGCTGTGATTGATTATTTGGAACAACACCTTGATTGCTCCAAATATTCAAATCATGA TGAAATTATTAAAGAAATATTATTTCCGATTTATTCATACTTTGTGAGAAGGATACTTTT ACCGCAAAAGGAGCACAAACGAGCCTTGCATTTTATGAAACGAGCATTAAGGTATTGTCA CTCTTTGGATGAACTGTGGGAATTCACATGTCCAATGCAGGAATGTGATGATCAGAGTTT TTTGCAGGTGCATAATGAGCTTTTGGAACATCTCATCAAAACAACTTGTGACCTTATTGT CAGGCATAGTGGAGAACTTTTTGCCAAATCCAAAATTGATTCATCATTATCTCAACAACA ACCTGCCGATGGTTTACCTTCCTCCCAATCATCATCTTCTTCTTCTGGTACCACTTTTAC CGATTGGGAATATGCTCTTTTCAAAACCGAGTGGTTGGAAATCAAAGATGATCAAAAGCC AGCTTTTTATCCCTCATCATGCCACCATTTACTGGATCCAATAAGAGGATACTCTGCCAC AATTCTCATGCCTTCGAATGATCCAAAAAAAGCATTGAGAAAGATTTGA
Download Fasta

Fasta :-

MLYWLLGSLPFVFLFSFAYYKQNWLLYCNYMPRGQARVLEYLPSIFNLPFEDIMLDTLDG KAKIHCWFLRYMPSGGSLDSSFLQHKKSTDKANNDEDAIFSFHHSSSSNATTSSPSSSAS QGNNNSSSGDNLSQQDTKKKIKKGTSSMMLQYKKQLQYTPTIIMFHGNAGNISHRLTNAR DMYRSCKCNILMVEYRGYGRSTGEPSEEGLKNDAETAIRYLLEKRSDINPNNIFIFGRSL GGAVAIFLAAKYANVIRGVIVENTFISVPKLIPSLFPYRFAVPVLQYLCINKWDNETILR SATFRNDFHRKRLNGDLPFLFISGRKDELIPPEHMDTLIEIYCERYGDYCYVKRFEEGTH YGTWLCPGYYLNLYRFIKKFRVNPPSVSETRSRKASSSTTSVKPHIPTSSTDQIHTSGDD IVIHENITLTYADSLTIPPENHHGSGHNSGTSSGANSGDNTPRKKGTYMFR

Proline iminopeptidase-like

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0127480	T	399	0.687	0.059	NF0127480	T	400	0.667	0.027	NF0127480	S	396	0.593	0.037	NF0127480	S	397	0.593	0.046	NF0127480	S	398	0.573	0.049	NF0127480	T	408	0.562	0.320	NF0127480	T	112	0.558	0.145	NF0127480	S	401	0.557	0.081	NF0127480	T	411	0.527	0.174	NF0127480	T	111	0.523	0.165	NF0127480	T	390	0.523	0.032	NF0127480	S	118	0.500	0.052

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0127480	T	399	0.687	0.059	NF0127480	T	400	0.667	0.027	NF0127480	S	396	0.593	0.037	NF0127480	S	397	0.593	0.046	NF0127480	S	398	0.573	0.049	NF0127480	T	408	0.562	0.320	NF0127480	T	112	0.558	0.145	NF0127480	S	401	0.557	0.081	NF0127480	T	411	0.527	0.174	NF0127480	T	111	0.523	0.165	NF0127480	T	390	0.523	0.032	NF0127480	S	118	0.500	0.052

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0127480	386 S	VNPPSVSET	0.997	unsp	NF0127480	386 S	VNPPSVSET	0.997	unsp	NF0127480	386 S	VNPPSVSET	0.997	unsp	NF0127480	396 S	SRKASSSTT	0.995	unsp	NF0127480	401 S	SSTTSVKPH	0.995	unsp	NF0127480	409 S	HIPTSSTDQ	0.992	unsp	NF0127480	461 T	SGDNTPRKK	0.99	unsp	NF0127480	133 S	GDNLSQQDT	0.992	unsp	NF0127480	206 S	TGEPSEEGL	0.99	unsp

NF0127480 | silent information regulator protein sir2

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proline iminopeptidase-like

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India