NF0130830 | serine protease family

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_IDPredictionOTHERSPmTPCS_Position
NF0130830OTHER0.9945170.0027900.002693
No Results

  • Fasta :-

    >NF0130830 MGGLISRLLFQPPEPASYTKSDKYIFLECEDKKVVDERGQKVNVKIPLVFLECKGSDLCL LYSHGNATDLGQTMPYLELLRSSLKINVCGYEYQGYGISEPKVSCSEPRVYASIEAAVKY LKTERGFSEDRIIVYVLVIRFMIITRDFKYLCDNTNS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0130830.fa Sequence name : NF0130830 Sequence length : 157 VALUES OF COMPUTED PARAMETERS Coef20 : 3.426 CoefTot : -0.548 ChDiff : 0 ZoneTo : 13 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.212 1.876 0.021 0.515 MesoH : -0.815 0.165 -0.366 0.146 MuHd_075 : 12.158 14.415 3.178 4.888 MuHd_095 : 30.754 21.676 7.762 6.412 MuHd_100 : 29.758 18.793 7.723 6.197 MuHd_105 : 24.935 12.797 6.824 5.359 Hmax_075 : 9.100 11.783 1.073 5.040 Hmax_095 : 16.300 18.000 2.792 6.080 Hmax_100 : 14.500 13.800 2.329 5.460 Hmax_105 : 12.700 10.400 1.742 4.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9779 0.0221 DFMC : 0.9958 0.0042
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 157 NF0130830 MGGLISRLLFQPPEPASYTKSDKYIFLECEDKKVVDERGQKVNVKIPLVFLECKGSDLCLLYSHGNATDLGQTMPYLELL 80 RSSLKINVCGYEYQGYGISEPKVSCSEPRVYASIEAAVKYLKTERGFSEDRIIVYVLVIRFMIITRDFKYLCDNTNS 160 ................................................................................ 80 ............................................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0130830 7 MGGLISR|LL 0.074 . NF0130830 20 EPASYTK|SD 0.083 . NF0130830 23 SYTKSDK|YI 0.068 . NF0130830 32 FLECEDK|KV 0.071 . NF0130830 33 LECEDKK|VV 0.118 . NF0130830 38 KKVVDER|GQ 0.099 . NF0130830 41 VDERGQK|VN 0.086 . NF0130830 45 GQKVNVK|IP 0.062 . NF0130830 54 LVFLECK|GS 0.065 . NF0130830 81 PYLELLR|SS 0.082 . NF0130830 85 LLRSSLK|IN 0.060 . NF0130830 102 YGISEPK|VS 0.059 . NF0130830 109 VSCSEPR|VY 0.108 . NF0130830 119 SIEAAVK|YL 0.066 . NF0130830 122 AAVKYLK|TE 0.052 . NF0130830 125 KYLKTER|GF 0.086 . NF0130830 131 RGFSEDR|II 0.080 . NF0130830 140 VYVLVIR|FM 0.078 . NF0130830 146 RFMIITR|DF 0.083 . NF0130830 149 IITRDFK|YL 0.137 . ____________________________^_________________

  • Fasta :-

    >NF0130830 ATGGGCGGTCTCATTTCCCGTTTGCTTTTTCAACCACCAGAACCAGCCAGCTACACAAAG TCAGACAAGTACATCTTTCTGGAATGCGAAGACAAGAAAGTTGTTGATGAAAGAGGGCAA AAAGTGAATGTCAAAATACCGCTCGTGTTCTTGGAATGTAAAGGATCCGATCTTTGTTTA TTGTACAGCCACGGTAACGCCACTGACTTAGGTCAAACAATGCCATACCTGGAGCTTCTT CGCAGTTCTTTAAAGATCAACGTTTGTGGGTACGAATATCAAGGATATGGAATATCTGAG CCAAAAGTAAGCTGCTCAGAACCTAGAGTGTATGCCAGCATTGAAGCAGCCGTCAAATAT TTAAAGACAGAAAGAGGTTTCTCAGAAGATAGAATAATAGTGTATGTATTAGTGATAAGA TTCATGATAATAACAAGAGATTTCAAATATTTGTGTGATAACACAAATTCATGA
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  • Fasta :-

    MGGLISRLLFQPPEPASYTKSDKYIFLECEDKKVVDERGQKVNVKIPLVFLECKGSDLCL LYSHGNATDLGQTMPYLELLRSSLKINVCGYEYQGYGISEPKVSCSEPRVYASIEAAVKY LKTERGFSEDRIIVYVLVIRFMIITRDFKYLCDNTNS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0130830104 SEPKVSCSEP0.993unspNF0130830128 SERGFSEDRI0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India