PBANKA_0212800 | alpha/beta hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0016298      

  • Curated_GO_Functions:  lipase activity      

  • Curated_GO_Processes:  lipid metabolic process      

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0212800OTHER0.9993180.0003080.000374
No Results

  • Fasta :-

    >PBANKA_0212800 MGSSLSSTALFRPTSPSYEDDLKNLIYIPELLHINPNKYLENKQFEIFNKDENIKELSKR KFPALFFYYSKKLKTKHTIMYFHSNSCDLGQIYEELYTLHEFLHVNILAIEYVGFGLSYL EGTPNQYNINRRALAAYNFLKSLNLNPENIILFGRSIGTGVATKLAHNVKIMGDNIGGII LHSPYISIEKLVEDYVSYSSYLIENIYDNFKNLTILSNNDDSDAPFLLIHGKDDEVINAS HSEYLIKNLNNKFKSSFYPEDSSHNCYYVIDDIAIPTKNFLCTLSKSRHQKKTEILLSLS YLRKELEIFEIRKFGYKKKGQKNIIYINNMYNDEYVKKIHKMKKKLCKKIKKMNKKYKLN ELGNEGIQNGTVLENSTKGYSEMYNNPVNKVANSSMLEKTQTIGDTGGSYTDQTFTDIES KSSSYTNYYEYNENQDGRSRVREIIYFFNNKCLKNTQKNDNINNKSKYIRAYSNFHLDEK TTNYNDSCASDYFSEIEEKQKNLSDSDIVNKKYHNAIYEKKKNGYKSSVLYYNFKNSIHN KFVTNITQYSDGIKRETNTNI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0212800.fa Sequence name : PBANKA_0212800 Sequence length : 561 VALUES OF COMPUTED PARAMETERS Coef20 : 3.959 CoefTot : 0.279 ChDiff : 12 ZoneTo : 18 KR : 1 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.865 1.359 0.017 0.614 MesoH : -0.532 0.355 -0.383 0.261 MuHd_075 : 18.906 17.081 4.579 5.040 MuHd_095 : 11.799 4.938 2.889 3.018 MuHd_100 : 10.363 0.750 2.318 1.451 MuHd_105 : 13.360 3.702 2.272 1.456 Hmax_075 : 16.217 12.483 1.833 4.293 Hmax_095 : 11.025 6.737 0.980 3.238 Hmax_100 : 9.400 2.200 0.242 2.080 Hmax_105 : 10.100 2.700 0.491 2.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5453 0.4547 DFMC : 0.5684 0.4316
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 561 PBANKA_0212800 MGSSLSSTALFRPTSPSYEDDLKNLIYIPELLHINPNKYLENKQFEIFNKDENIKELSKRKFPALFFYYSKKLKTKHTIM 80 YFHSNSCDLGQIYEELYTLHEFLHVNILAIEYVGFGLSYLEGTPNQYNINRRALAAYNFLKSLNLNPENIILFGRSIGTG 160 VATKLAHNVKIMGDNIGGIILHSPYISIEKLVEDYVSYSSYLIENIYDNFKNLTILSNNDDSDAPFLLIHGKDDEVINAS 240 HSEYLIKNLNNKFKSSFYPEDSSHNCYYVIDDIAIPTKNFLCTLSKSRHQKKTEILLSLSYLRKELEIFEIRKFGYKKKG 320 QKNIIYINNMYNDEYVKKIHKMKKKLCKKIKKMNKKYKLNELGNEGIQNGTVLENSTKGYSEMYNNPVNKVANSSMLEKT 400 QTIGDTGGSYTDQTFTDIESKSSSYTNYYEYNENQDGRSRVREIIYFFNNKCLKNTQKNDNINNKSKYIRAYSNFHLDEK 480 TTNYNDSCASDYFSEIEEKQKNLSDSDIVNKKYHNAIYEKKKNGYKSSVLYYNFKNSIHNKFVTNITQYSDGIKRETNTN 560 I 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 . 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0212800 12 SSTALFR|PT 0.109 . PBANKA_0212800 23 SYEDDLK|NL 0.059 . PBANKA_0212800 38 LHINPNK|YL 0.090 . PBANKA_0212800 43 NKYLENK|QF 0.069 . PBANKA_0212800 50 QFEIFNK|DE 0.078 . PBANKA_0212800 55 NKDENIK|EL 0.062 . PBANKA_0212800 59 NIKELSK|RK 0.060 . PBANKA_0212800 60 IKELSKR|KF 0.178 . PBANKA_0212800 61 KELSKRK|FP 0.070 . PBANKA_0212800 71 LFFYYSK|KL 0.062 . PBANKA_0212800 72 FFYYSKK|LK 0.099 . PBANKA_0212800 74 YYSKKLK|TK 0.078 . PBANKA_0212800 76 SKKLKTK|HT 0.086 . PBANKA_0212800 131 NQYNINR|RA 0.093 . PBANKA_0212800 132 QYNINRR|AL 0.160 . PBANKA_0212800 141 AAYNFLK|SL 0.082 . PBANKA_0212800 155 NIILFGR|SI 0.264 . PBANKA_0212800 164 GTGVATK|LA 0.070 . PBANKA_0212800 170 KLAHNVK|IM 0.084 . PBANKA_0212800 190 PYISIEK|LV 0.071 . PBANKA_0212800 211 NIYDNFK|NL 0.057 . PBANKA_0212800 232 FLLIHGK|DD 0.081 . PBANKA_0212800 247 HSEYLIK|NL 0.076 . PBANKA_0212800 252 IKNLNNK|FK 0.070 . PBANKA_0212800 254 NLNNKFK|SS 0.125 . PBANKA_0212800 278 DIAIPTK|NF 0.058 . PBANKA_0212800 286 FLCTLSK|SR 0.076 . PBANKA_0212800 288 CTLSKSR|HQ 0.077 . PBANKA_0212800 291 SKSRHQK|KT 0.283 . PBANKA_0212800 292 KSRHQKK|TE 0.090 . PBANKA_0212800 303 LSLSYLR|KE 0.066 . PBANKA_0212800 304 SLSYLRK|EL 0.114 . PBANKA_0212800 312 LEIFEIR|KF 0.088 . PBANKA_0212800 313 EIFEIRK|FG 0.084 . PBANKA_0212800 317 IRKFGYK|KK 0.074 . PBANKA_0212800 318 RKFGYKK|KG 0.093 . PBANKA_0212800 319 KFGYKKK|GQ 0.123 . PBANKA_0212800 322 YKKKGQK|NI 0.069 . PBANKA_0212800 337 YNDEYVK|KI 0.060 . PBANKA_0212800 338 NDEYVKK|IH 0.084 . PBANKA_0212800 341 YVKKIHK|MK 0.055 . PBANKA_0212800 343 KKIHKMK|KK 0.064 . PBANKA_0212800 344 KIHKMKK|KL 0.169 . PBANKA_0212800 345 IHKMKKK|LC 0.130 . PBANKA_0212800 348 MKKKLCK|KI 0.075 . PBANKA_0212800 349 KKKLCKK|IK 0.081 . PBANKA_0212800 351 KLCKKIK|KM 0.072 . PBANKA_0212800 352 LCKKIKK|MN 0.101 . PBANKA_0212800 355 KIKKMNK|KY 0.063 . PBANKA_0212800 356 IKKMNKK|YK 0.129 . PBANKA_0212800 358 KMNKKYK|LN 0.093 . PBANKA_0212800 378 VLENSTK|GY 0.071 . PBANKA_0212800 390 YNNPVNK|VA 0.077 . PBANKA_0212800 399 NSSMLEK|TQ 0.072 . PBANKA_0212800 421 FTDIESK|SS 0.069 . PBANKA_0212800 438 NENQDGR|SR 0.125 . PBANKA_0212800 440 NQDGRSR|VR 0.072 . PBANKA_0212800 442 DGRSRVR|EI 0.089 . PBANKA_0212800 451 IYFFNNK|CL 0.059 . PBANKA_0212800 454 FNNKCLK|NT 0.066 . PBANKA_0212800 458 CLKNTQK|ND 0.064 . PBANKA_0212800 465 NDNINNK|SK 0.079 . PBANKA_0212800 467 NINNKSK|YI 0.085 . PBANKA_0212800 470 NKSKYIR|AY 0.131 . PBANKA_0212800 480 NFHLDEK|TT 0.058 . PBANKA_0212800 499 FSEIEEK|QK 0.059 . PBANKA_0212800 501 EIEEKQK|NL 0.069 . PBANKA_0212800 511 DSDIVNK|KY 0.065 . PBANKA_0212800 512 SDIVNKK|YH 0.106 . PBANKA_0212800 520 HNAIYEK|KK 0.064 . PBANKA_0212800 521 NAIYEKK|KN 0.102 . PBANKA_0212800 522 AIYEKKK|NG 0.093 . PBANKA_0212800 526 KKKNGYK|SS 0.068 . PBANKA_0212800 535 VLYYNFK|NS 0.061 . PBANKA_0212800 541 KNSIHNK|FV 0.140 . PBANKA_0212800 554 QYSDGIK|RE 0.057 . PBANKA_0212800 555 YSDGIKR|ET 0.155 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0212800 ATGGGAAGTTCTTTATCCAGCACAGCCTTATTTCGTCCTACTTCGCCAAGTTACGAAGAT GATTTGAAAAATTTAATTTATATCCCAGAGCTTTTACACATAAATCCAAATAAATATTTG GAAAATAAACAATTCGAGATATTTAACAAAGATGAAAATATAAAAGAATTAAGTAAAAGA AAATTCCCAGCTTTATTTTTTTATTATTCTAAAAAGTTAAAAACTAAACATACAATTATG TATTTTCATAGTAATTCCTGTGATTTAGGACAAATATATGAAGAATTATATACTTTACAT GAATTTTTACACGTTAATATATTAGCTATAGAATATGTTGGGTTTGGTTTATCCTATTTA GAAGGAACGCCCAATCAGTATAATATTAATAGAAGGGCGTTAGCTGCTTATAATTTTTTA AAGTCATTAAATTTAAACCCTGAAAATATAATACTATTTGGTAGATCTATAGGTACTGGT GTTGCTACTAAATTAGCTCATAATGTAAAAATTATGGGCGATAATATAGGAGGGATTATA TTACATTCTCCATATATATCAATTGAAAAGTTAGTAGAAGATTATGTTTCATATTCTTCA TACCTCATTGAAAATATATATGACAATTTTAAAAATTTAACAATCCTTAGCAATAACGAT GATTCAGATGCTCCATTCTTACTTATACATGGTAAAGATGATGAAGTAATAAATGCATCT CATTCCGAATATTTAATAAAAAATTTAAATAATAAATTTAAGTCTTCATTTTATCCTGAA GACTCTTCTCACAACTGTTACTATGTCATTGACGATATCGCTATCCCCACAAAGAATTTT CTATGCACTCTCAGTAAATCACGCCACCAAAAAAAGACAGAAATATTATTATCGTTATCT TATCTAAGAAAAGAGCTAGAAATATTTGAAATAAGAAAATTTGGTTATAAAAAAAAAGGC CAAAAAAACATAATATATATAAACAATATGTACAATGATGAATATGTAAAGAAAATTCAT AAAATGAAAAAAAAATTGTGCAAAAAAATTAAAAAAATGAATAAAAAATATAAGTTAAAT GAACTAGGTAATGAAGGAATACAAAACGGTACCGTATTGGAAAATAGTACCAAAGGATAT TCCGAAATGTATAACAATCCAGTCAATAAAGTTGCGAATTCGTCAATGTTAGAAAAAACA CAAACTATTGGAGACACAGGCGGTTCATATACCGACCAAACATTTACAGATATTGAAAGC AAATCCTCATCATATACAAATTATTATGAATATAATGAAAATCAAGATGGCAGATCTCGA GTTCGTGAAATAATATATTTTTTTAATAATAAATGTTTAAAAAATACACAAAAAAATGAT AATATAAATAATAAATCGAAATATATTAGAGCCTATTCAAATTTCCATCTAGATGAAAAA ACAACAAATTATAATGATTCATGCGCATCTGATTATTTTAGTGAAATAGAAGAAAAACAA AAAAATCTTTCTGATTCTGATATAGTTAATAAAAAATATCATAATGCGATATATGAAAAA AAAAAAAATGGATATAAATCAAGTGTATTATATTATAACTTTAAGAATAGTATACATAAT AAATTTGTTACTAATATAACACAATATTCGGATGGTATAAAAAGAGAAACCAATACAAAT ATATAA
  • Download Fasta

  • Fasta :-

    MGSSLSSTALFRPTSPSYEDDLKNLIYIPELLHINPNKYLENKQFEIFNKDENIKELSKR KFPALFFYYSKKLKTKHTIMYFHSNSCDLGQIYEELYTLHEFLHVNILAIEYVGFGLSYL EGTPNQYNINRRALAAYNFLKSLNLNPENIILFGRSIGTGVATKLAHNVKIMGDNIGGII LHSPYISIEKLVEDYVSYSSYLIENIYDNFKNLTILSNNDDSDAPFLLIHGKDDEVINAS HSEYLIKNLNNKFKSSFYPEDSSHNCYYVIDDIAIPTKNFLCTLSKSRHQKKTEILLSLS YLRKELEIFEIRKFGYKKKGQKNIIYINNMYNDEYVKKIHKMKKKLCKKIKKMNKKYKLN ELGNEGIQNGTVLENSTKGYSEMYNNPVNKVANSSMLEKTQTIGDTGGSYTDQTFTDIES KSSSYTNYYEYNENQDGRSRVREIIYFFNNKCLKNTQKNDNINNKSKYIRAYSNFHLDEK TTNYNDSCASDYFSEIEEKQKNLSDSDIVNKKYHNAIYEKKKNGYKSSVLYYNFKNSIHN KFVTNITQYSDGIKRETNTNI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0212800409 SDTGGSYTDQ0.992unspPBANKA_0212800409 SDTGGSYTDQ0.992unspPBANKA_0212800409 SDTGGSYTDQ0.992unspPBANKA_0212800494 SSDYFSEIEE0.994unspPBANKA_0212800504 SQKNLSDSDI0.997unspPBANKA_021280015 SFRPTSPSYE0.99unspPBANKA_021280017 SPTSPSYEDD0.998unsp

PBANKA_021280      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India