PBANKA_0304700 | serine repeat antigen 5

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:  exit from host cell      

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0304700SP0.0238000.9761660.000034CS pos: 24-25. AKS-KI. Pr: 0.9387
No Results

  • Fasta :-

    >PBANKA_0304700 MKTYKIKYFLLLSLFINLINQAKSKIIISCFGKQHCKICHIIIRNCFLSGTSNLQKCIAC EENYYNTRTCIKHEESFFNYKGTNALLELRDQSLQDNVSEESLSELISKILDVAIFRYEN KKTDANSMDDDYKSKISNLCLYLNFKDNYESAKNHKQTDVEHIESHIQHIVKTFIHANDN IEHMKNALRNPALCFQNPLEWVQDRLGYKENDEIPSVGIIPEKKLFKPYTNKSLMSSLYN ANSKCNRTYCNRFSDPNECEYNIRPLNQGTCGNCWAFASSTTISAYRCRKGLGFAEPSIK YVTLCKNKYLDDEDSQTFGHYNDNICHEGGHISSYIEILDASKMLPTSFDVPYNEPIKGG ECPTEVSTWGNIWNGVSSLSKILNGYIYKGYFKISFLDYVQAGKTNELINILKDYIIEQG AIFVSMEISQKLNFDHDGEQVMLNCEYGEVPDHALVLIGFGDYIKSSGEKSSYWLIRNSW GSRWGSNGNFKMDMYGPRNCNGRVLFNAFPLLLKMKENNISKPLPNDISSTDVKIRYKHS DFTKNKKNQRDQNRKITPNNYDDPYNFKPKTVDPPNNNNNDYVNPDYNSIDANDRQNNER FYPPSRDPEYDPSYPSMNNNRRFDPSDIINYRNKLRKIFQTDLTVTIGNFVYKRNIYSKR KNEYMEQFSCLRTYSMDSNLDNICRENCEKHIDTCMHSEVIGDCLDRNAPNYKCVYCGM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0304700.fa Sequence name : PBANKA_0304700 Sequence length : 719 VALUES OF COMPUTED PARAMETERS Coef20 : 4.306 CoefTot : -1.366 ChDiff : 1 ZoneTo : 60 KR : 9 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.182 1.376 0.157 0.523 MesoH : -0.588 0.255 -0.375 0.238 MuHd_075 : 26.017 22.987 8.181 6.347 MuHd_095 : 38.584 26.298 11.840 9.567 MuHd_100 : 38.506 24.574 12.321 9.908 MuHd_105 : 32.060 20.376 11.075 7.726 Hmax_075 : 19.133 19.367 4.635 6.592 Hmax_095 : 15.487 25.200 4.562 7.079 Hmax_100 : 15.100 20.100 5.331 6.690 Hmax_105 : 15.283 19.200 1.631 4.293 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0983 0.9017 DFMC : 0.0887 0.9113 This protein is probably imported in mitochondria. f(Ser) = 0.0833 f(Arg) = 0.0167 CMi = 0.89286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 719 PBANKA_0304700 MKTYKIKYFLLLSLFINLINQAKSKIIISCFGKQHCKICHIIIRNCFLSGTSNLQKCIACEENYYNTRTCIKHEESFFNY 80 KGTNALLELRDQSLQDNVSEESLSELISKILDVAIFRYENKKTDANSMDDDYKSKISNLCLYLNFKDNYESAKNHKQTDV 160 EHIESHIQHIVKTFIHANDNIEHMKNALRNPALCFQNPLEWVQDRLGYKENDEIPSVGIIPEKKLFKPYTNKSLMSSLYN 240 ANSKCNRTYCNRFSDPNECEYNIRPLNQGTCGNCWAFASSTTISAYRCRKGLGFAEPSIKYVTLCKNKYLDDEDSQTFGH 320 YNDNICHEGGHISSYIEILDASKMLPTSFDVPYNEPIKGGECPTEVSTWGNIWNGVSSLSKILNGYIYKGYFKISFLDYV 400 QAGKTNELINILKDYIIEQGAIFVSMEISQKLNFDHDGEQVMLNCEYGEVPDHALVLIGFGDYIKSSGEKSSYWLIRNSW 480 GSRWGSNGNFKMDMYGPRNCNGRVLFNAFPLLLKMKENNISKPLPNDISSTDVKIRYKHSDFTKNKKNQRDQNRKITPNN 560 YDDPYNFKPKTVDPPNNNNNDYVNPDYNSIDANDRQNNERFYPPSRDPEYDPSYPSMNNNRRFDPSDIINYRNKLRKIFQ 640 TDLTVTIGNFVYKRNIYSKRKNEYMEQFSCLRTYSMDSNLDNICRENCEKHIDTCMHSEVIGDCLDRNAPNYKCVYCGM 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >PBANKA_0304700 ATGAAAACATATAAAATTAAATATTTCCTTTTGTTAAGTTTGTTTATCAATCTGATAAAT CAAGCGAAATCGAAAATTATAATAAGTTGCTTTGGAAAACAACATTGTAAGATATGTCAC ATAATTATAAGAAATTGTTTTTTATCTGGAACAAGCAATTTACAAAAATGTATAGCTTGT GAAGAAAACTACTATAACACTAGGACATGTATAAAACATGAAGAAAGTTTTTTCAACTAT AAAGGGACTAATGCGCTTTTGGAGTTAAGAGATCAAAGCTTACAGGATAATGTTTCAGAA GAAAGCTTGAGTGAATTAATATCAAAAATATTAGATGTAGCCATATTTCGATATGAAAAT AAAAAAACAGATGCAAATAGTATGGATGATGATTATAAATCGAAAATATCAAATTTATGT TTGTATTTAAATTTTAAGGACAATTATGAAAGTGCAAAAAATCATAAACAAACTGATGTT GAGCATATAGAAAGCCATATTCAACATATTGTAAAAACATTTATCCATGCTAATGATAAT ATAGAACATATGAAAAATGCGTTAAGAAATCCAGCACTTTGTTTTCAAAATCCATTAGAA TGGGTTCAAGATAGATTAGGATATAAAGAAAATGATGAAATTCCTTCAGTAGGTATAATA CCAGAAAAAAAGTTATTTAAACCATATACAAATAAATCATTGATGAGCTCGTTATATAAT GCTAATTCAAAATGTAACAGAACATATTGTAATCGATTTTCTGATCCCAATGAGTGTGAA TATAATATAAGACCTCTTAATCAGGGAACATGTGGAAATTGTTGGGCCTTTGCATCTTCA ACTACGATATCTGCATATAGATGCAGAAAAGGACTTGGATTCGCTGAGCCTTCAATAAAA TACGTGACTTTATGTAAAAACAAATATTTAGATGATGAAGATTCTCAAACGTTTGGACAT TATAATGATAATATATGTCATGAAGGTGGACATATTTCATCATATATAGAAATTTTAGAT GCATCTAAAATGCTTCCAACATCTTTTGATGTTCCATATAACGAACCTATAAAAGGTGGG GAATGTCCTACTGAAGTTAGTACATGGGGAAACATATGGAATGGTGTATCATCTTTAAGT AAAATATTAAATGGATATATATACAAAGGATATTTTAAAATATCTTTTTTAGATTATGTA CAAGCAGGTAAAACAAATGAATTAATTAATATCTTAAAAGATTACATAATTGAGCAAGGT GCTATATTTGTTTCAATGGAAATATCACAAAAATTAAATTTTGATCATGATGGTGAACAA GTTATGTTAAATTGTGAATATGGTGAAGTTCCTGATCATGCATTAGTTTTAATTGGTTTT GGAGATTATATAAAAAGCTCAGGAGAAAAAAGTTCATATTGGTTAATAAGAAATAGTTGG GGTTCTAGGTGGGGTTCCAATGGAAATTTTAAAATGGATATGTACGGACCGAGAAATTGT AATGGCCGAGTTTTATTTAATGCATTTCCATTATTATTAAAAATGAAAGAAAATAATATT TCTAAACCTTTACCTAATGATATATCATCTACAGATGTAAAAATAAGATATAAGCATTCT GATTTTACTAAAAATAAAAAAAACCAAAGAGATCAAAATCGAAAAATAACTCCAAATAAT TATGACGATCCATATAATTTTAAACCTAAGACAGTAGACCCGCCAAATAATAACAACAAT GATTATGTTAATCCTGATTATAATTCAATAGATGCTAATGATAGACAAAATAACGAACGA TTTTACCCTCCCTCCAGAGATCCTGAATACGACCCTAGTTACCCAAGTATGAATAACAAT CGACGATTTGATCCTAGTGATATAATTAATTATAGAAATAAATTAAGAAAGATTTTCCAA ACTGATTTGACTGTAACTATAGGAAATTTTGTATATAAAAGAAATATCTATTCTAAAAGG AAAAATGAGTACATGGAGCAGTTTTCATGCCTCCGAACCTATTCAATGGATTCAAATTTA GATAATATATGCCGAGAAAACTGTGAAAAACATATCGACACATGCATGCACAGTGAAGTT ATAGGAGATTGTTTGGATAGAAATGCACCAAATTATAAATGTGTCTATTGTGGAATGTGA
  • Download Fasta

  • Fasta :-

    MKTYKIKYFLLLSLFINLINQAKSKIIISCFGKQHCKICHIIIRNCFLSGTSNLQKCIAC EENYYNTRTCIKHEESFFNYKGTNALLELRDQSLQDNVSEESLSELISKILDVAIFRYEN KKTDANSMDDDYKSKISNLCLYLNFKDNYESAKNHKQTDVEHIESHIQHIVKTFIHANDN IEHMKNALRNPALCFQNPLEWVQDRLGYKENDEIPSVGIIPEKKLFKPYTNKSLMSSLYN ANSKCNRTYCNRFSDPNECEYNIRPLNQGTCGNCWAFASSTTISAYRCRKGLGFAEPSIK YVTLCKNKYLDDEDSQTFGHYNDNICHEGGHISSYIEILDASKMLPTSFDVPYNEPIKGG ECPTEVSTWGNIWNGVSSLSKILNGYIYKGYFKISFLDYVQAGKTNELINILKDYIIEQG AIFVSMEISQKLNFDHDGEQVMLNCEYGEVPDHALVLIGFGDYIKSSGEKSSYWLIRNSW GSRWGSNGNFKMDMYGPRNCNGRVLFNAFPLLLKMKENNISKPLPNDISSTDVKIRYKHS DFTKNKKNQRDQNRKITPNNYDDPYNFKPKTVDPPNNNNNDYVNPDYNSIDANDRQNNER FYPPSRDPEYDPSYPSMNNNRRFDPSDIINYRNKLRKIFQTDLTVTIGNFVYKRNIYSKR KNEYMEQFSCLRTYSMDSNLDNICRENCEKHIDTCMHSEVIGDCLDRNAPNYKCVYCGM

  • title: active site
  • coordinates: Q268,C274,H453,N478
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0304700151 SDNYESAKNH0.993unspPBANKA_0304700151 SDNYESAKNH0.993unspPBANKA_0304700151 SDNYESAKNH0.993unspPBANKA_0304700582 YNNNDYVNPD0.991unspPBANKA_030470093 SLRDQSLQDN0.992unspPBANKA_0304700127 STDANSMDDD0.996unsp

PBANKA_030470      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India