PBANKA_0412000 | DER1-like protein, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0412000SP0.0103900.9895800.000029CS pos: 24-25. CDA-KV. Pr: 0.9191
No Results

  • Fasta :-

    >PBANKA_0412000 MVVSKFLFFLSLIASVGYYYYCDAKVCVNDISSQLLKNISFKNTIRNDSKIKGQNICYNF RKEKKSILKKKIKKKYSLNYSKGCIQKKKKYNLYFLNSSKFTDIKENVKAWFNLDYIENH YAYSYIKSFARIPPITKIYLINTFILSVLIHLNKNVYKYILYDFDKIFKNGEIWRLVTPY FYIGNLYLQYILMFNYLNIYMSAVEIAHYKNPEDFLIFLTYGYISNILFTIIASMYNENV MDLKKYIHKIINLIITIPSNNNKDDKKLVQKETYNHLGYVFSTYILYYWSRINEGSLINC FDLFFIKAEYIPFFFVIQNILLYNEFSFFEVASILSSYTFFTYEKYLKSNFLRDLFRGFL KSIRVYPMYNMYKEEYE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0412000.fa Sequence name : PBANKA_0412000 Sequence length : 377 VALUES OF COMPUTED PARAMETERS Coef20 : 4.393 CoefTot : -0.148 ChDiff : 21 ZoneTo : 22 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.747 1.994 0.311 0.744 MesoH : 0.152 0.672 -0.227 0.402 MuHd_075 : 17.007 17.344 6.352 5.211 MuHd_095 : 7.590 9.483 3.503 3.075 MuHd_100 : 12.359 16.640 4.340 4.655 MuHd_105 : 15.458 19.806 5.430 5.580 Hmax_075 : 17.617 21.000 4.224 6.772 Hmax_095 : 15.575 17.150 3.047 6.440 Hmax_100 : 19.500 21.900 4.050 7.580 Hmax_105 : 21.100 26.500 4.611 7.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8144 0.1856 DFMC : 0.8777 0.1223
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 377 PBANKA_0412000 MVVSKFLFFLSLIASVGYYYYCDAKVCVNDISSQLLKNISFKNTIRNDSKIKGQNICYNFRKEKKSILKKKIKKKYSLNY 80 SKGCIQKKKKYNLYFLNSSKFTDIKENVKAWFNLDYIENHYAYSYIKSFARIPPITKIYLINTFILSVLIHLNKNVYKYI 160 LYDFDKIFKNGEIWRLVTPYFYIGNLYLQYILMFNYLNIYMSAVEIAHYKNPEDFLIFLTYGYISNILFTIIASMYNENV 240 MDLKKYIHKIINLIITIPSNNNKDDKKLVQKETYNHLGYVFSTYILYYWSRINEGSLINCFDLFFIKAEYIPFFFVIQNI 320 LLYNEFSFFEVASILSSYTFFTYEKYLKSNFLRDLFRGFLKSIRVYPMYNMYKEEYE 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0412000 5 --MVVSK|FL 0.068 . PBANKA_0412000 25 YYYCDAK|VC 0.055 . PBANKA_0412000 37 ISSQLLK|NI 0.077 . PBANKA_0412000 42 LKNISFK|NT 0.074 . PBANKA_0412000 46 SFKNTIR|ND 0.112 . PBANKA_0412000 50 TIRNDSK|IK 0.082 . PBANKA_0412000 52 RNDSKIK|GQ 0.065 . PBANKA_0412000 61 NICYNFR|KE 0.074 . PBANKA_0412000 62 ICYNFRK|EK 0.088 . PBANKA_0412000 64 YNFRKEK|KS 0.112 . PBANKA_0412000 65 NFRKEKK|SI 0.161 . PBANKA_0412000 69 EKKSILK|KK 0.061 . PBANKA_0412000 70 KKSILKK|KI 0.134 . PBANKA_0412000 71 KSILKKK|IK 0.118 . PBANKA_0412000 73 ILKKKIK|KK 0.065 . PBANKA_0412000 74 LKKKIKK|KY 0.095 . PBANKA_0412000 75 KKKIKKK|YS 0.122 . PBANKA_0412000 82 YSLNYSK|GC 0.063 . PBANKA_0412000 87 SKGCIQK|KK 0.063 . PBANKA_0412000 88 KGCIQKK|KK 0.086 . PBANKA_0412000 89 GCIQKKK|KY 0.108 . PBANKA_0412000 90 CIQKKKK|YN 0.122 . PBANKA_0412000 100 YFLNSSK|FT 0.075 . PBANKA_0412000 105 SKFTDIK|EN 0.062 . PBANKA_0412000 109 DIKENVK|AW 0.058 . PBANKA_0412000 127 YAYSYIK|SF 0.077 . PBANKA_0412000 131 YIKSFAR|IP 0.075 . PBANKA_0412000 137 RIPPITK|IY 0.054 . PBANKA_0412000 154 VLIHLNK|NV 0.071 . PBANKA_0412000 158 LNKNVYK|YI 0.076 . PBANKA_0412000 166 ILYDFDK|IF 0.070 . PBANKA_0412000 169 DFDKIFK|NG 0.056 . PBANKA_0412000 175 KNGEIWR|LV 0.136 . PBANKA_0412000 210 VEIAHYK|NP 0.066 . PBANKA_0412000 244 ENVMDLK|KY 0.063 . PBANKA_0412000 245 NVMDLKK|YI 0.138 . PBANKA_0412000 249 LKKYIHK|II 0.069 . PBANKA_0412000 263 IPSNNNK|DD 0.082 . PBANKA_0412000 266 NNNKDDK|KL 0.079 . PBANKA_0412000 267 NNKDDKK|LV 0.130 . PBANKA_0412000 271 DKKLVQK|ET 0.070 . PBANKA_0412000 291 ILYYWSR|IN 0.106 . PBANKA_0412000 307 FDLFFIK|AE 0.056 . PBANKA_0412000 345 TFFTYEK|YL 0.058 . PBANKA_0412000 348 TYEKYLK|SN 0.063 . PBANKA_0412000 353 LKSNFLR|DL 0.185 . PBANKA_0412000 357 FLRDLFR|GF 0.103 . PBANKA_0412000 361 LFRGFLK|SI 0.084 . PBANKA_0412000 364 GFLKSIR|VY 0.071 . PBANKA_0412000 373 PMYNMYK|EE 0.061 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0412000 ATGGTTGTATCCAAATTTTTATTTTTTTTAAGCTTAATTGCTAGTGTGGGGTACTATTAT TATTGTGACGCTAAAGTTTGTGTAAATGATATTTCAAGTCAGCTGTTAAAAAATATTTCG TTTAAAAATACTATAAGAAATGATAGTAAGATCAAAGGGCAAAATATATGTTATAATTTT AGGAAGGAAAAGAAAAGCATTTTGAAAAAAAAAATAAAAAAAAAATATTCATTGAATTAT TCTAAAGGATGTATACAAAAAAAAAAAAAGTATAATTTATATTTTTTAAATTCATCAAAA TTTACTGATATAAAAGAAAACGTTAAAGCGTGGTTTAATTTGGACTATATAGAAAATCAT TATGCTTATTCCTATATAAAATCCTTTGCTCGAATACCCCCTATTACAAAAATATATTTG ATAAACACCTTTATATTAAGTGTTTTAATTCATTTAAACAAAAATGTTTATAAATATATT TTATATGATTTTGATAAAATTTTTAAAAACGGGGAAATATGGAGATTAGTAACACCCTAT TTTTATATAGGAAATTTATATTTACAATATATTTTAATGTTTAATTATTTAAATATATAT ATGTCAGCAGTTGAAATAGCACATTATAAAAACCCAGAAGATTTTTTAATTTTTCTTACA TATGGTTATATATCAAATATTTTGTTTACTATAATTGCCAGTATGTACAATGAAAATGTT ATGGACTTGAAAAAATATATACACAAAATAATAAATTTAATTATTACTATTCCTTCTAAT AATAATAAAGACGATAAAAAATTAGTACAAAAAGAAACTTATAATCATTTAGGTTATGTT TTTTCAACATATATATTATATTATTGGAGTCGAATAAACGAAGGTTCTTTAATTAATTGT TTTGATCTATTTTTCATTAAAGCAGAATATATCCCTTTTTTTTTTGTTATACAAAACATT TTATTATATAACGAGTTTTCTTTTTTCGAAGTTGCTTCCATATTATCAAGTTATACTTTT TTTACATATGAAAAATATTTAAAATCAAATTTTTTAAGGGATTTATTCAGAGGGTTCCTT AAATCCATTCGAGTCTACCCTATGTACAATATGTACAAAGAGGAGTATGAATAA
  • Download Fasta

  • Fasta :-

    MVVSKFLFFLSLIASVGYYYYCDAKVCVNDISSQLLKNISFKNTIRNDSKIKGQNICYNF RKEKKSILKKKIKKKYSLNYSKGCIQKKKKYNLYFLNSSKFTDIKENVKAWFNLDYIENH YAYSYIKSFARIPPITKIYLINTFILSVLIHLNKNVYKYILYDFDKIFKNGEIWRLVTPY FYIGNLYLQYILMFNYLNIYMSAVEIAHYKNPEDFLIFLTYGYISNILFTIIASMYNENV MDLKKYIHKIINLIITIPSNNNKDDKKLVQKETYNHLGYVFSTYILYYWSRINEGSLINC FDLFFIKAEYIPFFFVIQNILLYNEFSFFEVASILSSYTFFTYEKYLKSNFLRDLFRGFL KSIRVYPMYNMYKEEYE

    No Results
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IDSitePeptideScoreMethod
PBANKA_041200049 SIRNDSKIKG0.99unsp

PBANKA_041200      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India