PBANKA_0514600 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0000408      GO:0005737      

  • Curated_GO_Components:  EKC/KEOPS complex      cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0514600OTHER0.9998070.0001600.000034
No Results

  • Fasta :-

    >PBANKA_0514600 MESISKKKMYILGMEGSANKLGISIIDEEMNILVNMRRTYVSEIGCGFIPREINAHHKYY IIDMIKDCLNKLKIKITDIGLICYTKGPGIGSALYVAYNISKLFSLLFNISVIGVNHCIA HIEMGIFITKLYHPIILYVSGSNTQIIYYNNYKKKYEIIGETLDIAIGNVIDRSARILKI SNSPSPGYNVELWARKKKLLRLLQKIEEKEQLEIYTEKEKQTFIKHDNEHCNENYQNHIY NNNDDVLVSNTKDDSSLKFNKKENYLQSSYYNELLQFPYTIKGMDISFSGYDFYINKYFS KYINKNSKKGNPQYKHNKKKGTNKINKDEDNKKKQKINENISPKNYNDQNSNIINDDNLT LEEDLYQDSKNDFNKLIQNNEKNNNKQTKINTNHILPNYSFLHGMKGSSYYEDNIIYKNE NKQNYGQNNEYYDDNCSIETSSDFYEKDLQELIYEEAEAIKLTEEEKRKIQICYSLQHHI FSMLIEITERAISFTNSKEVIIVGGVGCNIFLQNMMKKMAKQKNIKIGFMDHSYCVDNGA MIAYTGYLEYLNSKNKNDFNFENISIHQRYRTDDVFVTWR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0514600.fa Sequence name : PBANKA_0514600 Sequence length : 580 VALUES OF COMPUTED PARAMETERS Coef20 : 3.518 CoefTot : 0.000 ChDiff : 4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.288 1.718 0.170 0.623 MesoH : 0.490 0.951 -0.074 0.451 MuHd_075 : 23.285 10.194 6.168 3.318 MuHd_095 : 14.303 10.231 3.828 2.634 MuHd_100 : 3.978 11.884 1.495 2.486 MuHd_105 : 9.175 12.316 2.436 2.472 Hmax_075 : 15.283 10.383 1.810 4.200 Hmax_095 : 5.687 7.000 -0.813 2.780 Hmax_100 : 4.000 9.100 -1.156 2.920 Hmax_105 : 6.400 9.900 -0.634 3.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9263 0.0737 DFMC : 0.9290 0.0710
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 580 PBANKA_0514600 MESISKKKMYILGMEGSANKLGISIIDEEMNILVNMRRTYVSEIGCGFIPREINAHHKYYIIDMIKDCLNKLKIKITDIG 80 LICYTKGPGIGSALYVAYNISKLFSLLFNISVIGVNHCIAHIEMGIFITKLYHPIILYVSGSNTQIIYYNNYKKKYEIIG 160 ETLDIAIGNVIDRSARILKISNSPSPGYNVELWARKKKLLRLLQKIEEKEQLEIYTEKEKQTFIKHDNEHCNENYQNHIY 240 NNNDDVLVSNTKDDSSLKFNKKENYLQSSYYNELLQFPYTIKGMDISFSGYDFYINKYFSKYINKNSKKGNPQYKHNKKK 320 GTNKINKDEDNKKKQKINENISPKNYNDQNSNIINDDNLTLEEDLYQDSKNDFNKLIQNNEKNNNKQTKINTNHILPNYS 400 FLHGMKGSSYYEDNIIYKNENKQNYGQNNEYYDDNCSIETSSDFYEKDLQELIYEEAEAIKLTEEEKRKIQICYSLQHHI 480 FSMLIEITERAISFTNSKEVIIVGGVGCNIFLQNMMKKMAKQKNIKIGFMDHSYCVDNGAMIAYTGYLEYLNSKNKNDFN 560 FENISIHQRYRTDDVFVTWR 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0514600 6 -MESISK|KK 0.062 . PBANKA_0514600 7 MESISKK|KM 0.124 . PBANKA_0514600 8 ESISKKK|MY 0.123 . PBANKA_0514600 20 MEGSANK|LG 0.059 . PBANKA_0514600 37 NILVNMR|RT 0.087 . PBANKA_0514600 38 ILVNMRR|TY 0.114 . PBANKA_0514600 51 GCGFIPR|EI 0.105 . PBANKA_0514600 58 EINAHHK|YY 0.071 . PBANKA_0514600 66 YIIDMIK|DC 0.063 . PBANKA_0514600 71 IKDCLNK|LK 0.060 . PBANKA_0514600 73 DCLNKLK|IK 0.064 . PBANKA_0514600 75 LNKLKIK|IT 0.079 . PBANKA_0514600 86 GLICYTK|GP 0.066 . PBANKA_0514600 102 VAYNISK|LF 0.060 . PBANKA_0514600 130 MGIFITK|LY 0.066 . PBANKA_0514600 153 IYYNNYK|KK 0.063 . PBANKA_0514600 154 YYNNYKK|KY 0.133 . PBANKA_0514600 155 YNNYKKK|YE 0.194 . PBANKA_0514600 173 IGNVIDR|SA 0.169 . PBANKA_0514600 176 VIDRSAR|IL 0.245 . PBANKA_0514600 179 RSARILK|IS 0.106 . PBANKA_0514600 195 NVELWAR|KK 0.066 . PBANKA_0514600 196 VELWARK|KK 0.062 . PBANKA_0514600 197 ELWARKK|KL 0.081 . PBANKA_0514600 198 LWARKKK|LL 0.323 . PBANKA_0514600 201 RKKKLLR|LL 0.103 . PBANKA_0514600 205 LLRLLQK|IE 0.069 . PBANKA_0514600 209 LQKIEEK|EQ 0.057 . PBANKA_0514600 218 LEIYTEK|EK 0.065 . PBANKA_0514600 220 IYTEKEK|QT 0.066 . PBANKA_0514600 225 EKQTFIK|HD 0.071 . PBANKA_0514600 252 VLVSNTK|DD 0.062 . PBANKA_0514600 258 KDDSSLK|FN 0.062 . PBANKA_0514600 261 SSLKFNK|KE 0.064 . PBANKA_0514600 262 SLKFNKK|EN 0.086 . PBANKA_0514600 282 QFPYTIK|GM 0.066 . PBANKA_0514600 297 YDFYINK|YF 0.069 . PBANKA_0514600 301 INKYFSK|YI 0.075 . PBANKA_0514600 305 FSKYINK|NS 0.068 . PBANKA_0514600 308 YINKNSK|KG 0.067 . PBANKA_0514600 309 INKNSKK|GN 0.133 . PBANKA_0514600 315 KGNPQYK|HN 0.089 . PBANKA_0514600 318 PQYKHNK|KK 0.073 . PBANKA_0514600 319 QYKHNKK|KG 0.088 . PBANKA_0514600 320 YKHNKKK|GT 0.250 . PBANKA_0514600 324 KKKGTNK|IN 0.068 . PBANKA_0514600 327 GTNKINK|DE 0.084 . PBANKA_0514600 332 NKDEDNK|KK 0.059 . PBANKA_0514600 333 KDEDNKK|KQ 0.094 . PBANKA_0514600 334 DEDNKKK|QK 0.104 . PBANKA_0514600 336 DNKKKQK|IN 0.068 . PBANKA_0514600 344 NENISPK|NY 0.074 . PBANKA_0514600 370 DLYQDSK|ND 0.061 . PBANKA_0514600 375 SKNDFNK|LI 0.085 . PBANKA_0514600 382 LIQNNEK|NN 0.066 . PBANKA_0514600 386 NEKNNNK|QT 0.066 . PBANKA_0514600 389 NNNKQTK|IN 0.080 . PBANKA_0514600 406 SFLHGMK|GS 0.074 . PBANKA_0514600 418 EDNIIYK|NE 0.064 . PBANKA_0514600 422 IYKNENK|QN 0.065 . PBANKA_0514600 447 SSDFYEK|DL 0.073 . PBANKA_0514600 461 EEAEAIK|LT 0.064 . PBANKA_0514600 467 KLTEEEK|RK 0.058 . PBANKA_0514600 468 LTEEEKR|KI 0.145 . PBANKA_0514600 469 TEEEKRK|IQ 0.076 . PBANKA_0514600 490 LIEITER|AI 0.082 . PBANKA_0514600 498 ISFTNSK|EV 0.079 . PBANKA_0514600 517 FLQNMMK|KM 0.064 . PBANKA_0514600 518 LQNMMKK|MA 0.154 . PBANKA_0514600 521 MMKKMAK|QK 0.079 . PBANKA_0514600 523 KKMAKQK|NI 0.096 . PBANKA_0514600 526 AKQKNIK|IG 0.059 . PBANKA_0514600 554 LEYLNSK|NK 0.057 . PBANKA_0514600 556 YLNSKNK|ND 0.067 . PBANKA_0514600 569 NISIHQR|YR 0.108 . PBANKA_0514600 571 SIHQRYR|TD 0.100 . PBANKA_0514600 580 DVFVTWR|-- 0.087 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0514600 ATGGAGAGCATCTCAAAAAAAAAAATGTATATTTTAGGAATGGAAGGAAGCGCTAATAAG TTAGGAATAAGCATAATAGATGAAGAAATGAATATACTTGTAAATATGAGAAGAACATAT GTATCAGAAATAGGGTGTGGTTTTATTCCCAGAGAAATAAATGCTCATCATAAATATTAT ATAATTGATATGATAAAAGATTGCTTAAATAAATTAAAAATAAAAATAACAGATATAGGA TTAATATGTTATACTAAAGGACCAGGTATAGGTTCAGCATTATATGTAGCATATAATATA TCAAAATTATTTTCTTTGCTTTTTAATATATCGGTTATAGGGGTGAATCATTGTATAGCT CATATAGAAATGGGAATATTTATTACAAAATTATACCATCCAATTATTTTATATGTTAGT GGGAGCAACACACAAATTATATATTATAATAATTATAAAAAAAAATATGAAATAATAGGG GAAACTTTAGATATTGCTATTGGAAATGTTATTGATAGATCTGCTCGAATTTTAAAAATT TCTAATTCGCCATCTCCTGGGTATAATGTAGAATTATGGGCTCGAAAAAAAAAACTATTA AGATTATTACAAAAGATTGAGGAAAAAGAACAATTGGAAATCTATACAGAAAAAGAAAAA CAAACTTTTATTAAGCATGACAATGAACACTGCAATGAAAATTATCAAAATCATATTTAC AATAATAATGATGATGTTTTAGTTTCTAACACAAAAGATGATTCATCATTAAAATTTAAT AAAAAAGAAAATTATTTACAATCGTCATATTATAATGAACTATTACAATTTCCATATACT ATTAAAGGTATGGATATATCTTTTAGTGGTTATGATTTTTATATTAATAAATATTTTTCA AAATATATAAATAAAAATAGCAAAAAGGGTAATCCACAATATAAGCATAACAAGAAAAAA GGAACCAACAAAATTAATAAAGATGAAGATAATAAAAAAAAACAAAAAATAAATGAAAAT ATTTCTCCAAAAAATTATAATGATCAAAATTCAAATATTATAAATGATGATAATCTAACC TTAGAAGAAGATTTGTATCAAGACTCCAAAAATGATTTTAATAAACTTATTCAAAACAAT GAAAAAAATAATAATAAACAAACAAAAATAAATACAAATCATATATTACCCAATTATAGT TTTTTGCATGGAATGAAAGGAAGTTCTTATTATGAAGATAATATTATATACAAAAATGAA AACAAACAAAATTATGGTCAGAATAATGAATATTATGATGACAATTGCTCAATAGAAACG AGTTCAGATTTTTATGAAAAGGATTTACAAGAACTTATATATGAAGAGGCTGAAGCTATC AAATTAACTGAAGAAGAAAAAAGAAAAATTCAAATATGCTATAGTTTACAACATCATATA TTTAGTATGCTAATTGAAATAACCGAAAGAGCTATTTCATTTACAAATAGTAAAGAAGTA ATTATTGTAGGGGGGGTGGGATGTAATATATTTCTTCAAAACATGATGAAAAAAATGGCA AAACAAAAAAATATAAAAATCGGATTTATGGATCATAGTTATTGTGTAGACAATGGTGCT ATGATTGCTTATACTGGATATTTAGAATATTTAAATTCAAAAAATAAAAATGATTTTAAT TTCGAAAATATATCTATTCATCAGCGATATCGAACAGATGACGTTTTTGTTACGTGGCGA TAA
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  • Fasta :-

    MESISKKKMYILGMEGSANKLGISIIDEEMNILVNMRRTYVSEIGCGFIPREINAHHKYY IIDMIKDCLNKLKIKITDIGLICYTKGPGIGSALYVAYNISKLFSLLFNISVIGVNHCIA HIEMGIFITKLYHPIILYVSGSNTQIIYYNNYKKKYEIIGETLDIAIGNVIDRSARILKI SNSPSPGYNVELWARKKKLLRLLQKIEEKEQLEIYTEKEKQTFIKHDNEHCNENYQNHIY NNNDDVLVSNTKDDSSLKFNKKENYLQSSYYNELLQFPYTIKGMDISFSGYDFYINKYFS KYINKNSKKGNPQYKHNKKKGTNKINKDEDNKKKQKINENISPKNYNDQNSNIINDDNLT LEEDLYQDSKNDFNKLIQNNEKNNNKQTKINTNHILPNYSFLHGMKGSSYYEDNIIYKNE NKQNYGQNNEYYDDNCSIETSSDFYEKDLQELIYEEAEAIKLTEEEKRKIQICYSLQHHI FSMLIEITERAISFTNSKEVIIVGGVGCNIFLQNMMKKMAKQKNIKIGFMDHSYCVDNGA MIAYTGYLEYLNSKNKNDFNFENISIHQRYRTDDVFVTWR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0514600366 YEEDLYQDSK0.992unspPBANKA_0514600366 YEEDLYQDSK0.992unspPBANKA_0514600366 YEEDLYQDSK0.992unspPBANKA_0514600493 SERAISFTNS0.996unspPBANKA_0514600256 SKDDSSLKFN0.997unspPBANKA_0514600342 SNENISPKNY0.993unsp

PBANKA_051460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India