PBANKA_0517600 | plasmepsin VII

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0517600SP0.0409240.9578820.001195CS pos: 24-25. ILS-IP. Pr: 0.5281
No Results

  • Fasta :-

    >PBANKA_0517600 MKSVYHHFAIIFFLKLFLCNCILSIPKKTLGKGLFSLGLNEFKNNVDNNSLNILGELKNS KPFINKSFIQINEKKDNVLLLKLYKQNIASDKLSTYYGKIAIGENSENIFNVLFDTGSTE FWVPFKTCKFTKNNIHNKYERTQSFKYKYDDKGLPSVLEINYLSGKLVGFDGYDTVYLGP GFAIPHTNIAFATSIDIPVLEKFKWDGIIGLGFENEDSQKRGIKPFLDHLKDEKILTEKN YKNIFGYYITNTGGYITLGGIDNRFKRSPDEKIIWSPVSTEMGFWTIDILGIRKEKQPYM NERRDDEVIVKYEGFHDGSNKSIVDTGTFLIYAPKKTIENYLNDLTINSCEDKQKLPYII FQIKSKEIESIKGLSVIELVLSPNDYVIEYIDEVNSTKECIIGIQSDEDNINGWTLGQVF LKSYYTIFDKDNLQIGFVRNKQTINDETYLNESFLRVSKKRNKKKSYNGPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0517600.fa Sequence name : PBANKA_0517600 Sequence length : 471 VALUES OF COMPUTED PARAMETERS Coef20 : 4.232 CoefTot : -1.018 ChDiff : 4 ZoneTo : 40 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.641 2.365 0.378 0.726 MesoH : -0.612 0.297 -0.407 0.284 MuHd_075 : 28.244 18.526 8.849 6.487 MuHd_095 : 30.374 22.881 10.101 7.633 MuHd_100 : 20.051 15.913 7.269 5.188 MuHd_105 : 16.031 13.610 4.787 3.892 Hmax_075 : 19.133 23.567 5.095 8.400 Hmax_095 : 14.963 17.675 4.356 5.854 Hmax_100 : 15.100 28.100 4.355 6.400 Hmax_105 : 15.400 20.400 2.147 6.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6504 0.3496 DFMC : 0.7533 0.2467
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 471 PBANKA_0517600 MKSVYHHFAIIFFLKLFLCNCILSIPKKTLGKGLFSLGLNEFKNNVDNNSLNILGELKNSKPFINKSFIQINEKKDNVLL 80 LKLYKQNIASDKLSTYYGKIAIGENSENIFNVLFDTGSTEFWVPFKTCKFTKNNIHNKYERTQSFKYKYDDKGLPSVLEI 160 NYLSGKLVGFDGYDTVYLGPGFAIPHTNIAFATSIDIPVLEKFKWDGIIGLGFENEDSQKRGIKPFLDHLKDEKILTEKN 240 YKNIFGYYITNTGGYITLGGIDNRFKRSPDEKIIWSPVSTEMGFWTIDILGIRKEKQPYMNERRDDEVIVKYEGFHDGSN 320 KSIVDTGTFLIYAPKKTIENYLNDLTINSCEDKQKLPYIIFQIKSKEIESIKGLSVIELVLSPNDYVIEYIDEVNSTKEC 400 IIGIQSDEDNINGWTLGQVFLKSYYTIFDKDNLQIGFVRNKQTINDETYLNESFLRVSKKRNKKKSYNGPL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..........................P..................................................... 320 ................................................................................ 400 ....................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0517600 2 -----MK|SV 0.130 . PBANKA_0517600 15 AIIFFLK|LF 0.054 . PBANKA_0517600 27 CILSIPK|KT 0.055 . PBANKA_0517600 28 ILSIPKK|TL 0.278 . PBANKA_0517600 32 PKKTLGK|GL 0.067 . PBANKA_0517600 43 LGLNEFK|NN 0.057 . PBANKA_0517600 58 NILGELK|NS 0.054 . PBANKA_0517600 61 GELKNSK|PF 0.058 . PBANKA_0517600 66 SKPFINK|SF 0.083 . PBANKA_0517600 74 FIQINEK|KD 0.058 . PBANKA_0517600 75 IQINEKK|DN 0.102 . PBANKA_0517600 82 DNVLLLK|LY 0.058 . PBANKA_0517600 85 LLLKLYK|QN 0.063 . PBANKA_0517600 92 QNIASDK|LS 0.066 . PBANKA_0517600 99 LSTYYGK|IA 0.068 . PBANKA_0517600 126 EFWVPFK|TC 0.056 . PBANKA_0517600 129 VPFKTCK|FT 0.077 . PBANKA_0517600 132 KTCKFTK|NN 0.068 . PBANKA_0517600 138 KNNIHNK|YE 0.077 . PBANKA_0517600 141 IHNKYER|TQ 0.092 . PBANKA_0517600 146 ERTQSFK|YK 0.070 . PBANKA_0517600 148 TQSFKYK|YD 0.191 . PBANKA_0517600 152 KYKYDDK|GL 0.066 . PBANKA_0517600 166 INYLSGK|LV 0.079 . PBANKA_0517600 202 DIPVLEK|FK 0.066 . PBANKA_0517600 204 PVLEKFK|WD 0.069 . PBANKA_0517600 220 ENEDSQK|RG 0.056 . PBANKA_0517600 221 NEDSQKR|GI 0.213 . PBANKA_0517600 224 SQKRGIK|PF 0.155 . PBANKA_0517600 231 PFLDHLK|DE 0.058 . PBANKA_0517600 234 DHLKDEK|IL 0.057 . PBANKA_0517600 239 EKILTEK|NY 0.059 . PBANKA_0517600 242 LTEKNYK|NI 0.063 . PBANKA_0517600 264 LGGIDNR|FK 0.076 . PBANKA_0517600 266 GIDNRFK|RS 0.057 . PBANKA_0517600 267 IDNRFKR|SP 0.832 *ProP* PBANKA_0517600 272 KRSPDEK|II 0.084 . PBANKA_0517600 293 IDILGIR|KE 0.067 . PBANKA_0517600 294 DILGIRK|EK 0.067 . PBANKA_0517600 296 LGIRKEK|QP 0.116 . PBANKA_0517600 303 QPYMNER|RD 0.107 . PBANKA_0517600 304 PYMNERR|DD 0.183 . PBANKA_0517600 311 DDEVIVK|YE 0.064 . PBANKA_0517600 321 FHDGSNK|SI 0.087 . PBANKA_0517600 335 FLIYAPK|KT 0.061 . PBANKA_0517600 336 LIYAPKK|TI 0.145 . PBANKA_0517600 353 INSCEDK|QK 0.069 . PBANKA_0517600 355 SCEDKQK|LP 0.069 . PBANKA_0517600 364 YIIFQIK|SK 0.075 . PBANKA_0517600 366 IFQIKSK|EI 0.074 . PBANKA_0517600 372 KEIESIK|GL 0.078 . PBANKA_0517600 398 DEVNSTK|EC 0.064 . PBANKA_0517600 422 LGQVFLK|SY 0.096 . PBANKA_0517600 430 YYTIFDK|DN 0.066 . PBANKA_0517600 439 LQIGFVR|NK 0.088 . PBANKA_0517600 441 IGFVRNK|QT 0.068 . PBANKA_0517600 456 LNESFLR|VS 0.071 . PBANKA_0517600 459 SFLRVSK|KR 0.088 . PBANKA_0517600 460 FLRVSKK|RN 0.107 . PBANKA_0517600 461 LRVSKKR|NK 0.288 . PBANKA_0517600 463 VSKKRNK|KK 0.068 . PBANKA_0517600 464 SKKRNKK|KS 0.311 . PBANKA_0517600 465 KKRNKKK|SY 0.249 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0517600 ATGAAAAGTGTATATCACCATTTTGCCATTATATTTTTTCTGAAATTGTTTTTATGCAAT TGCATATTATCTATACCCAAAAAAACTCTTGGTAAAGGTTTATTTTCTTTAGGGTTAAAC GAATTTAAAAATAATGTAGACAATAATTCTTTAAATATATTAGGAGAATTAAAAAATTCA AAGCCTTTTATAAATAAATCTTTTATACAAATAAATGAAAAAAAAGACAATGTTTTGTTA TTAAAATTGTATAAACAAAACATAGCTTCTGATAAACTGTCTACTTATTATGGTAAGATA GCAATAGGTGAAAATTCAGAAAACATATTTAATGTTTTATTTGATACAGGTTCAACTGAA TTTTGGGTACCTTTTAAAACTTGTAAATTTACAAAAAATAATATCCATAATAAATATGAA CGTACCCAATCGTTTAAATATAAATATGACGATAAAGGGTTGCCAAGTGTATTGGAGATA AATTACCTCAGTGGAAAGTTAGTAGGATTTGACGGCTACGATACGGTTTACCTAGGCCCG GGCTTTGCCATCCCCCATACGAATATAGCATTTGCCACAAGCATAGATATACCCGTTTTG GAAAAATTCAAATGGGACGGGATAATAGGGCTTGGATTCGAAAATGAAGATTCTCAAAAG CGCGGAATAAAACCATTTTTAGATCATTTAAAAGATGAAAAAATTTTAACAGAGAAAAAT TACAAGAACATATTTGGTTATTATATAACTAACACAGGAGGGTATATAACACTAGGTGGA ATAGATAATCGTTTTAAAAGAAGTCCTGATGAAAAAATTATTTGGAGCCCAGTTTCAACA GAGATGGGGTTTTGGACAATTGATATTTTAGGAATACGAAAGGAAAAACAACCATATATG AATGAAAGAAGAGATGATGAAGTGATTGTAAAATATGAAGGATTTCATGATGGAAGTAAT AAATCAATAGTTGATACTGGAACCTTTTTAATATATGCACCTAAAAAAACAATAGAAAAT TATTTAAATGATCTGACAATAAATTCTTGTGAAGATAAACAAAAATTACCATATATAATT TTTCAAATAAAATCCAAAGAAATTGAATCAATAAAAGGATTATCTGTTATTGAATTAGTT TTATCTCCTAATGATTATGTCATAGAATATATAGATGAAGTGAATTCAACAAAAGAATGT ATCATAGGTATACAATCCGATGAAGACAATATAAATGGATGGACGCTAGGACAAGTTTTT TTAAAATCCTATTACACTATTTTTGATAAAGATAATTTACAGATTGGTTTTGTTCGAAAT AAGCAAACCATAAATGATGAAACATATTTAAATGAATCATTTCTAAGGGTTAGTAAAAAA AGAAATAAAAAAAAGAGTTATAATGGGCCACTATAA
  • Download Fasta

  • Fasta :-

    MKSVYHHFAIIFFLKLFLCNCILSIPKKTLGKGLFSLGLNEFKNNVDNNSLNILGELKNS KPFINKSFIQINEKKDNVLLLKLYKQNIASDKLSTYYGKIAIGENSENIFNVLFDTGSTE FWVPFKTCKFTKNNIHNKYERTQSFKYKYDDKGLPSVLEINYLSGKLVGFDGYDTVYLGP GFAIPHTNIAFATSIDIPVLEKFKWDGIIGLGFENEDSQKRGIKPFLDHLKDEKILTEKN YKNIFGYYITNTGGYITLGGIDNRFKRSPDEKIIWSPVSTEMGFWTIDILGIRKEKQPYM NERRDDEVIVKYEGFHDGSNKSIVDTGTFLIYAPKKTIENYLNDLTINSCEDKQKLPYII FQIKSKEIESIKGLSVIELVLSPNDYVIEYIDEVNSTKECIIGIQSDEDNINGWTLGQVF LKSYYTIFDKDNLQIGFVRNKQTINDETYLNESFLRVSKKRNKKKSYNGPL

  • title: catalytic residue
  • coordinates: D115,D325
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0517600322 SGSNKSIVDT0.993unspPBANKA_0517600322 SGSNKSIVDT0.993unspPBANKA_0517600322 SGSNKSIVDT0.993unspPBANKA_0517600375 SIKGLSVIEL0.991unspPBANKA_0517600382 SELVLSPNDY0.994unspPBANKA_0517600396 SDEVNSTKEC0.994unspPBANKA_0517600406 SIGIQSDEDN0.993unspPBANKA_0517600458 SFLRVSKKRN0.997unspPBANKA_0517600218 SENEDSQKRG0.992unspPBANKA_0517600279 SWSPVSTEMG0.993unsp

PBANKA_051760      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India