PBANKA_0623200 | lysophospholipase, putative

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_0623200OTHER0.9999670.0000140.000020
No Results

  • Fasta :-

    >PBANKA_0623200 MEEAELNNDELRKTVFNLDGNPKVDYFYNKDGLLLKTYGWIVKKALGIVLLIHGLKGHAR FTYLRANAEVINNNEVLVIDNNNYYVYNGSWVEKFNQSGYSVYALDLQGHGESEGWANLR GHIKRFGDLVDDVIQYMNKIQDEISNDNINDDESHDIVITQKKRLPMYIVGHSMGGNIAL RVLQVLNKAKEKSVSKVEDILKYKKNGVLIGDFMSIYDNDDLKDEVTSVSEPINLNNAPN DNTIGNAYGTYCISNDSACDNDNDSTTTGGSDINNTSVSTEGNVIASTSTEYNVIASTST EYNVIASTSTEDNVIANTSAEDNVIASTSTEDNVIASTSAEDNVIASTSAEDNVITSTSA EDNVIPNTSAEDNVIASTSTEDNVIPNTSTNGNNKNNEKYNCLDKLNIKGCVSLSGMVSF EKIAQPGTNLFNYIYLPITHFLSYIAPNMQTMSELPYKSFPFIENLCKVDKYRHNGGITF KYVYELIKAMGALNDDINYIPKDIPLLFIHAKDDCICYYKGVKLFYDRINSYNKELYSVE NMDHSLTIEPGNELIVQKIIDWICSLEKDNKNAIEDQA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0623200.fa Sequence name : PBANKA_0623200 Sequence length : 578 VALUES OF COMPUTED PARAMETERS Coef20 : 3.170 CoefTot : 0.000 ChDiff : -36 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.082 1.518 -0.005 0.604 MesoH : -0.328 0.184 -0.367 0.226 MuHd_075 : 30.746 20.843 8.945 6.844 MuHd_095 : 28.026 16.624 8.394 4.735 MuHd_100 : 33.058 18.402 8.995 5.097 MuHd_105 : 30.918 15.635 7.449 4.490 Hmax_075 : -5.600 7.817 -3.245 2.870 Hmax_095 : -2.000 6.500 -2.279 2.350 Hmax_100 : 3.600 8.500 -1.606 3.000 Hmax_105 : 4.200 6.825 -1.478 2.581 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9664 0.0336 DFMC : 0.9605 0.0395
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 578 PBANKA_0623200 MEEAELNNDELRKTVFNLDGNPKVDYFYNKDGLLLKTYGWIVKKALGIVLLIHGLKGHARFTYLRANAEVINNNEVLVID 80 NNNYYVYNGSWVEKFNQSGYSVYALDLQGHGESEGWANLRGHIKRFGDLVDDVIQYMNKIQDEISNDNINDDESHDIVIT 160 QKKRLPMYIVGHSMGGNIALRVLQVLNKAKEKSVSKVEDILKYKKNGVLIGDFMSIYDNDDLKDEVTSVSEPINLNNAPN 240 DNTIGNAYGTYCISNDSACDNDNDSTTTGGSDINNTSVSTEGNVIASTSTEYNVIASTSTEYNVIASTSTEDNVIANTSA 320 EDNVIASTSTEDNVIASTSAEDNVIASTSAEDNVITSTSAEDNVIPNTSAEDNVIASTSTEDNVIPNTSTNGNNKNNEKY 400 NCLDKLNIKGCVSLSGMVSFEKIAQPGTNLFNYIYLPITHFLSYIAPNMQTMSELPYKSFPFIENLCKVDKYRHNGGITF 480 KYVYELIKAMGALNDDINYIPKDIPLLFIHAKDDCICYYKGVKLFYDRINSYNKELYSVENMDHSLTIEPGNELIVQKII 560 DWICSLEKDNKNAIEDQA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0623200 12 LNNDELR|KT 0.095 . PBANKA_0623200 13 NNDELRK|TV 0.095 . PBANKA_0623200 23 NLDGNPK|VD 0.057 . PBANKA_0623200 30 VDYFYNK|DG 0.060 . PBANKA_0623200 36 KDGLLLK|TY 0.069 . PBANKA_0623200 43 TYGWIVK|KA 0.066 . PBANKA_0623200 44 YGWIVKK|AL 0.139 . PBANKA_0623200 56 LLIHGLK|GH 0.055 . PBANKA_0623200 60 GLKGHAR|FT 0.115 . PBANKA_0623200 65 ARFTYLR|AN 0.095 . PBANKA_0623200 94 NGSWVEK|FN 0.083 . PBANKA_0623200 120 EGWANLR|GH 0.089 . PBANKA_0623200 124 NLRGHIK|RF 0.081 . PBANKA_0623200 125 LRGHIKR|FG 0.298 . PBANKA_0623200 139 VIQYMNK|IQ 0.060 . PBANKA_0623200 162 DIVITQK|KR 0.055 . PBANKA_0623200 163 IVITQKK|RL 0.095 . PBANKA_0623200 164 VITQKKR|LP 0.137 . PBANKA_0623200 181 GGNIALR|VL 0.079 . PBANKA_0623200 188 VLQVLNK|AK 0.069 . PBANKA_0623200 190 QVLNKAK|EK 0.069 . PBANKA_0623200 192 LNKAKEK|SV 0.217 . PBANKA_0623200 196 KEKSVSK|VE 0.056 . PBANKA_0623200 202 KVEDILK|YK 0.060 . PBANKA_0623200 204 EDILKYK|KN 0.071 . PBANKA_0623200 205 DILKYKK|NG 0.071 . PBANKA_0623200 223 YDNDDLK|DE 0.066 . PBANKA_0623200 395 STNGNNK|NN 0.070 . PBANKA_0623200 399 NNKNNEK|YN 0.062 . PBANKA_0623200 405 KYNCLDK|LN 0.064 . PBANKA_0623200 409 LDKLNIK|GC 0.058 . PBANKA_0623200 422 GMVSFEK|IA 0.072 . PBANKA_0623200 458 MSELPYK|SF 0.092 . PBANKA_0623200 468 FIENLCK|VD 0.054 . PBANKA_0623200 471 NLCKVDK|YR 0.078 . PBANKA_0623200 473 CKVDKYR|HN 0.144 . PBANKA_0623200 481 NGGITFK|YV 0.089 . PBANKA_0623200 488 YVYELIK|AM 0.067 . PBANKA_0623200 502 DINYIPK|DI 0.071 . PBANKA_0623200 512 LLFIHAK|DD 0.077 . PBANKA_0623200 520 DCICYYK|GV 0.065 . PBANKA_0623200 523 CYYKGVK|LF 0.057 . PBANKA_0623200 528 VKLFYDR|IN 0.074 . PBANKA_0623200 534 RINSYNK|EL 0.073 . PBANKA_0623200 558 NELIVQK|II 0.069 . PBANKA_0623200 568 WICSLEK|DN 0.067 . PBANKA_0623200 571 SLEKDNK|NA 0.068 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0623200 ATGGAAGAAGCTGAATTGAATAATGATGAATTAAGAAAAACTGTTTTTAATTTAGATGGA AATCCTAAGGTTGATTATTTCTATAATAAAGATGGTTTATTATTAAAAACATATGGGTGG ATAGTTAAAAAGGCCTTAGGTATTGTATTATTAATCCATGGGCTGAAAGGCCATGCTCGA TTCACTTATTTGAGAGCAAATGCAGAAGTAATAAATAACAACGAAGTTTTAGTGATAGAT AATAACAACTACTATGTTTACAATGGTAGTTGGGTTGAAAAATTTAATCAAAGCGGATAT TCAGTATACGCATTGGATTTACAAGGACATGGAGAATCAGAAGGGTGGGCAAATTTAAGA GGTCATATTAAGCGCTTTGGAGATTTAGTTGATGATGTAATACAATATATGAATAAAATC CAAGATGAAATATCAAATGACAATATAAATGATGATGAATCTCATGATATAGTAATAACT CAAAAAAAAAGACTCCCTATGTATATTGTTGGGCATTCGATGGGAGGGAATATTGCTTTA AGGGTATTACAAGTATTGAATAAGGCAAAAGAAAAAAGTGTTTCTAAAGTTGAAGATATA TTAAAATATAAAAAAAATGGTGTCCTGATAGGCGATTTCATGAGTATTTATGACAATGAT GATCTTAAAGATGAAGTTACTAGTGTAAGTGAACCCATTAATCTTAATAATGCCCCTAAT GATAATACTATAGGAAATGCTTATGGTACGTATTGCATTTCCAATGACAGCGCATGTGAT AATGATAATGATAGTACTACTACTGGTGGTAGTGATATCAACAATACCAGTGTTAGTACT GAAGGCAATGTAATAGCCAGTACTAGTACTGAATACAATGTAATAGCCAGTACTAGTACT GAATACAATGTAATAGCTAGTACTAGTACTGAAGACAATGTAATAGCCAATACTAGTGCC GAAGACAATGTAATAGCCAGTACTAGTACTGAAGACAATGTAATAGCCAGTACTAGTGCC GAAGACAATGTAATAGCCAGTACTAGTGCCGAAGACAATGTAATAACCAGTACTAGTGCC GAAGACAATGTAATACCCAATACTAGTGCCGAAGACAATGTAATAGCCAGTACTAGTACC GAAGACAATGTAATACCCAATACTAGTACCAATGGTAACAATAAAAATAACGAAAAATAT AATTGTTTGGACAAATTAAATATTAAAGGTTGTGTATCGTTGTCTGGTATGGTGTCTTTC GAAAAAATAGCACAGCCAGGAACAAATTTATTCAATTATATTTATTTGCCTATAACACAT TTCTTATCTTATATTGCACCTAACATGCAAACTATGTCAGAATTACCATATAAAAGTTTC CCATTTATTGAAAATTTATGTAAAGTAGATAAATATCGACATAATGGGGGAATTACATTT AAATATGTATATGAGCTTATAAAAGCAATGGGTGCATTGAACGATGATATTAATTATATA CCAAAAGACATCCCTTTATTGTTTATCCATGCAAAAGACGATTGTATTTGTTATTATAAA GGAGTAAAGTTGTTTTATGATAGAATAAATTCTTATAATAAAGAATTATATTCGGTCGAA AACATGGACCATTCTCTAACAATAGAACCAGGAAATGAGTTAATTGTACAAAAAATCATT GACTGGATATGTAGTTTGGAAAAGGATAATAAAAATGCAATAGAAGATCAAGCATAA
  • Download Fasta

  • Fasta :-

    MEEAELNNDELRKTVFNLDGNPKVDYFYNKDGLLLKTYGWIVKKALGIVLLIHGLKGHAR FTYLRANAEVINNNEVLVIDNNNYYVYNGSWVEKFNQSGYSVYALDLQGHGESEGWANLR GHIKRFGDLVDDVIQYMNKIQDEISNDNINDDESHDIVITQKKRLPMYIVGHSMGGNIAL RVLQVLNKAKEKSVSKVEDILKYKKNGVLIGDFMSIYDNDDLKDEVTSVSEPINLNNAPN DNTIGNAYGTYCISNDSACDNDNDSTTTGGSDINNTSVSTEGNVIASTSTEYNVIASTST EYNVIASTSTEDNVIANTSAEDNVIASTSTEDNVIASTSAEDNVIASTSAEDNVITSTSA EDNVIPNTSAEDNVIASTSTEDNVIPNTSTNGNNKNNEKYNCLDKLNIKGCVSLSGMVSF EKIAQPGTNLFNYIYLPITHFLSYIAPNMQTMSELPYKSFPFIENLCKVDKYRHNGGITF KYVYELIKAMGALNDDINYIPKDIPLLFIHAKDDCICYYKGVKLFYDRINSYNKELYSVE NMDHSLTIEPGNELIVQKIIDWICSLEKDNKNAIEDQA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0623200309 SIASTSTEDN0.997unspPBANKA_0623200309 SIASTSTEDN0.997unspPBANKA_0623200309 SIASTSTEDN0.997unspPBANKA_0623200319 SIANTSAEDN0.994unspPBANKA_0623200329 SIASTSTEDN0.997unspPBANKA_0623200339 SIASTSAEDN0.996unspPBANKA_0623200349 SIASTSAEDN0.996unspPBANKA_0623200359 SITSTSAEDN0.996unspPBANKA_0623200369 SIPNTSAEDN0.994unspPBANKA_0623200379 SIASTSTEDN0.997unspPBANKA_0623200195 SEKSVSKVED0.995unspPBANKA_0623200228 SDEVTSVSEP0.995unsp

PBANKA_062320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India