PBANKA_0704300 | SPRY domain, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0704300OTHER0.9999410.0000010.000058
No Results

  • Fasta :-

    >PBANKA_0704300 MEQNKENSVTTNKSAEYSNTSIKDIDEKNETNDINRFNKKRKIEALDEGKSEIQKMHQNG DENEYVKNMEKDNKNQCLNNIDESGHEKNADNSNKNNDKADKTGNSSNNEYTKRGNINIL EESKELKKENYKYYIDYRKYRNKNNVTFSTKYKDSCISLSSDKLTCYGDKGWSSVFVNNG ADVGKWYYEIKIEEPVHKSNFLGYKDTILKVNPYVRVGFACRYMRYDYPIGTDKYSYCVN SKNGKIFNNSISYDCMEPINVGDIIGCYINLKNKNSYTFDPRSDKKLYEYLQNGILCDPK NPPILKKNYGSFIFFSLNGQIKKNAFIDIYEGFYHPSVSLYMGASAKINLGPKFTYRHLN DYVPCIYMDPPIIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0704300.fa Sequence name : PBANKA_0704300 Sequence length : 374 VALUES OF COMPUTED PARAMETERS Coef20 : 3.454 CoefTot : 0.000 ChDiff : 6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.541 0.894 -0.015 0.421 MesoH : -0.644 0.054 -0.443 0.212 MuHd_075 : 20.831 14.907 6.520 2.889 MuHd_095 : 18.160 3.234 4.704 0.875 MuHd_100 : 27.252 7.340 6.581 1.903 MuHd_105 : 29.382 8.636 6.833 2.302 Hmax_075 : 0.700 2.917 -2.420 0.735 Hmax_095 : -3.700 -8.200 -3.939 -1.270 Hmax_100 : -2.200 -3.800 -3.894 -0.710 Hmax_105 : -1.400 -3.800 -3.511 -0.779 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9518 0.0482 DFMC : 0.8760 0.1240
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 374 PBANKA_0704300 MEQNKENSVTTNKSAEYSNTSIKDIDEKNETNDINRFNKKRKIEALDEGKSEIQKMHQNGDENEYVKNMEKDNKNQCLNN 80 IDESGHEKNADNSNKNNDKADKTGNSSNNEYTKRGNINILEESKELKKENYKYYIDYRKYRNKNNVTFSTKYKDSCISLS 160 SDKLTCYGDKGWSSVFVNNGADVGKWYYEIKIEEPVHKSNFLGYKDTILKVNPYVRVGFACRYMRYDYPIGTDKYSYCVN 240 SKNGKIFNNSISYDCMEPINVGDIIGCYINLKNKNSYTFDPRSDKKLYEYLQNGILCDPKNPPILKKNYGSFIFFSLNGQ 320 IKKNAFIDIYEGFYHPSVSLYMGASAKINLGPKFTYRHLNDYVPCIYMDPPIIL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0704300 5 --MEQNK|EN 0.064 . PBANKA_0704300 13 NSVTTNK|SA 0.098 . PBANKA_0704300 23 YSNTSIK|DI 0.106 . PBANKA_0704300 28 IKDIDEK|NE 0.057 . PBANKA_0704300 36 ETNDINR|FN 0.083 . PBANKA_0704300 39 DINRFNK|KR 0.115 . PBANKA_0704300 40 INRFNKK|RK 0.121 . PBANKA_0704300 41 NRFNKKR|KI 0.301 . PBANKA_0704300 42 RFNKKRK|IE 0.092 . PBANKA_0704300 50 EALDEGK|SE 0.074 . PBANKA_0704300 55 GKSEIQK|MH 0.072 . PBANKA_0704300 67 DENEYVK|NM 0.062 . PBANKA_0704300 71 YVKNMEK|DN 0.060 . PBANKA_0704300 74 NMEKDNK|NQ 0.057 . PBANKA_0704300 88 DESGHEK|NA 0.079 . PBANKA_0704300 95 NADNSNK|NN 0.080 . PBANKA_0704300 99 SNKNNDK|AD 0.069 . PBANKA_0704300 102 NNDKADK|TG 0.059 . PBANKA_0704300 113 SNNEYTK|RG 0.065 . PBANKA_0704300 114 NNEYTKR|GN 0.212 . PBANKA_0704300 124 NILEESK|EL 0.056 . PBANKA_0704300 127 EESKELK|KE 0.060 . PBANKA_0704300 128 ESKELKK|EN 0.082 . PBANKA_0704300 132 LKKENYK|YY 0.069 . PBANKA_0704300 138 KYYIDYR|KY 0.082 . PBANKA_0704300 139 YYIDYRK|YR 0.079 . PBANKA_0704300 141 IDYRKYR|NK 0.327 . PBANKA_0704300 143 YRKYRNK|NN 0.062 . PBANKA_0704300 151 NVTFSTK|YK 0.065 . PBANKA_0704300 153 TFSTKYK|DS 0.112 . PBANKA_0704300 163 ISLSSDK|LT 0.063 . PBANKA_0704300 170 LTCYGDK|GW 0.070 . PBANKA_0704300 185 NGADVGK|WY 0.072 . PBANKA_0704300 191 KWYYEIK|IE 0.073 . PBANKA_0704300 198 IEEPVHK|SN 0.091 . PBANKA_0704300 205 SNFLGYK|DT 0.071 . PBANKA_0704300 210 YKDTILK|VN 0.056 . PBANKA_0704300 216 KVNPYVR|VG 0.087 . PBANKA_0704300 222 RVGFACR|YM 0.082 . PBANKA_0704300 225 FACRYMR|YD 0.308 . PBANKA_0704300 234 YPIGTDK|YS 0.064 . PBANKA_0704300 242 SYCVNSK|NG 0.058 . PBANKA_0704300 245 VNSKNGK|IF 0.069 . PBANKA_0704300 272 GCYINLK|NK 0.057 . PBANKA_0704300 274 YINLKNK|NS 0.064 . PBANKA_0704300 282 SYTFDPR|SD 0.098 . PBANKA_0704300 285 FDPRSDK|KL 0.117 . PBANKA_0704300 286 DPRSDKK|LY 0.109 . PBANKA_0704300 300 GILCDPK|NP 0.055 . PBANKA_0704300 306 KNPPILK|KN 0.060 . PBANKA_0704300 307 NPPILKK|NY 0.125 . PBANKA_0704300 322 SLNGQIK|KN 0.066 . PBANKA_0704300 323 LNGQIKK|NA 0.107 . PBANKA_0704300 347 YMGASAK|IN 0.061 . PBANKA_0704300 353 KINLGPK|FT 0.075 . PBANKA_0704300 357 GPKFTYR|HL 0.143 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0704300 ATGGAACAAAATAAGGAAAATTCTGTAACAACAAATAAAAGTGCAGAATACAGTAACACT AGCATAAAAGACATAGATGAAAAAAATGAAACAAATGATATTAATAGGTTTAATAAAAAA AGAAAAATTGAGGCATTAGATGAAGGCAAATCAGAGATACAAAAAATGCATCAAAATGGA GACGAAAATGAATATGTTAAAAATATGGAAAAAGACAATAAAAATCAATGTTTAAATAAT ATTGACGAATCAGGGCACGAAAAAAATGCAGATAATTCAAATAAAAATAATGATAAAGCC GATAAGACTGGAAATAGTAGTAATAATGAGTATACGAAAAGGGGTAATATTAATATTCTA GAAGAATCGAAAGAATTAAAAAAGGAAAATTATAAATATTATATCGATTATAGAAAATAC CGAAATAAAAACAATGTAACATTTTCAACGAAATATAAAGATAGCTGTATTAGTTTAAGT AGTGATAAGCTTACATGTTATGGAGATAAAGGATGGTCTAGTGTTTTTGTTAATAATGGG GCGGATGTAGGTAAGTGGTATTATGAAATAAAAATTGAAGAGCCTGTACATAAATCTAAT TTCTTGGGTTATAAAGATACAATTTTAAAAGTAAACCCATATGTAAGAGTTGGATTTGCT TGTAGATATATGAGATATGATTATCCAATAGGAACTGATAAATATAGTTATTGTGTTAAT AGTAAAAATGGGAAAATATTTAATAATTCAATAAGTTATGATTGTATGGAGCCTATTAAC GTTGGTGATATAATTGGATGTTACATTAACTTAAAGAATAAGAATAGTTATACTTTTGAT CCACGATCAGATAAAAAACTTTATGAATATTTACAAAATGGAATTTTATGCGATCCAAAA AACCCACCTATATTAAAGAAAAATTATGGCTCTTTTATATTTTTTTCCTTAAATGGTCAA ATAAAAAAAAACGCATTTATTGATATTTATGAAGGATTTTATCATCCATCAGTTAGCTTA TATATGGGAGCTTCTGCTAAAATTAATTTAGGGCCAAAATTTACATATCGTCATTTAAAT GATTATGTGCCATGTATATATATGGACCCTCCAATTATTTTGTAA
  • Download Fasta

  • Fasta :-

    MEQNKENSVTTNKSAEYSNTSIKDIDEKNETNDINRFNKKRKIEALDEGKSEIQKMHQNG DENEYVKNMEKDNKNQCLNNIDESGHEKNADNSNKNNDKADKTGNSSNNEYTKRGNINIL EESKELKKENYKYYIDYRKYRNKNNVTFSTKYKDSCISLSSDKLTCYGDKGWSSVFVNNG ADVGKWYYEIKIEEPVHKSNFLGYKDTILKVNPYVRVGFACRYMRYDYPIGTDKYSYCVN SKNGKIFNNSISYDCMEPINVGDIIGCYINLKNKNSYTFDPRSDKKLYEYLQNGILCDPK NPPILKKNYGSFIFFSLNGQIKKNAFIDIYEGFYHPSVSLYMGASAKINLGPKFTYRHLN DYVPCIYMDPPIIL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0704300283 SFDPRSDKKL0.99unspPBANKA_0704300283 SFDPRSDKKL0.99unspPBANKA_0704300283 SFDPRSDKKL0.99unspPBANKA_070430021 SYSNTSIKDI0.998unspPBANKA_070430093 SNADNSNKNN0.994unsp

PBANKA_070430      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India