PBANKA_0707200 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_0707200OTHER0.9896370.0101600.000203
No Results

  • Fasta :-

    >PBANKA_0707200 MFHLYELLMFFLRHPRDKYDEAFLGPIFLHFYDKNYYRRDIIIKNRRGEKLRCCFFTPFN YSENTPCVIYTHSTSSCQLEVLDILHILLVCECSVFSFDCAGCGLSDGYYSTKGWNESQD LYLILNHLRNVEKIKNIVLWGKHSGAASSIIAAALDRNIKMLILESPFVSLIELYKTTFN LCAKKKNEIIFKNICLYFTRRKIKKKFNYDINNVCPVFFIEDITIPTIYIISKSDSIVHP AHSLYLAYKQKKAKKIIYIAEKGSQPYEAYTYDSKLIIAMKSILYSYNFENDIRDKIFDL STYYKLFTFLREKYAYEFDYIDRLITKKINQKNKIIDKVKKFVCFKYQSKLSLSSSTYLN QSTVDSLRTSKVYENEYTFKTEENNNDSIQACGQINSSGFSNDYQDVFSDDDNMLDNPTE NNHMHTYYYIDKFNKLNEHNNKFEEIQGTSEKPFKLLHMQSSRSSLKSNKNTYKKSLTWN SNLQSSITYFKEDCPLNLQKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0707200.fa Sequence name : PBANKA_0707200 Sequence length : 501 VALUES OF COMPUTED PARAMETERS Coef20 : 3.592 CoefTot : -0.274 ChDiff : 12 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.924 1.929 0.422 0.644 MesoH : -0.155 0.437 -0.157 0.246 MuHd_075 : 17.947 5.171 4.156 3.023 MuHd_095 : 27.883 17.457 8.749 5.000 MuHd_100 : 33.103 18.645 9.035 6.148 MuHd_105 : 33.276 17.065 7.720 6.788 Hmax_075 : 7.700 3.150 -2.147 3.407 Hmax_095 : 11.700 13.200 0.279 5.320 Hmax_100 : 14.600 13.200 1.595 5.520 Hmax_105 : 15.200 11.300 1.108 5.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9746 0.0254 DFMC : 0.9946 0.0054
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 501 PBANKA_0707200 MFHLYELLMFFLRHPRDKYDEAFLGPIFLHFYDKNYYRRDIIIKNRRGEKLRCCFFTPFNYSENTPCVIYTHSTSSCQLE 80 VLDILHILLVCECSVFSFDCAGCGLSDGYYSTKGWNESQDLYLILNHLRNVEKIKNIVLWGKHSGAASSIIAAALDRNIK 160 MLILESPFVSLIELYKTTFNLCAKKKNEIIFKNICLYFTRRKIKKKFNYDINNVCPVFFIEDITIPTIYIISKSDSIVHP 240 AHSLYLAYKQKKAKKIIYIAEKGSQPYEAYTYDSKLIIAMKSILYSYNFENDIRDKIFDLSTYYKLFTFLREKYAYEFDY 320 IDRLITKKINQKNKIIDKVKKFVCFKYQSKLSLSSSTYLNQSTVDSLRTSKVYENEYTFKTEENNNDSIQACGQINSSGF 400 SNDYQDVFSDDDNMLDNPTENNHMHTYYYIDKFNKLNEHNNKFEEIQGTSEKPFKLLHMQSSRSSLKSNKNTYKKSLTWN 480 SNLQSSITYFKEDCPLNLQKN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0707200 13 LLMFFLR|HP 0.089 . PBANKA_0707200 16 FFLRHPR|DK 0.264 . PBANKA_0707200 18 LRHPRDK|YD 0.095 . PBANKA_0707200 34 FLHFYDK|NY 0.061 . PBANKA_0707200 38 YDKNYYR|RD 0.076 . PBANKA_0707200 39 DKNYYRR|DI 0.236 . PBANKA_0707200 44 RRDIIIK|NR 0.059 . PBANKA_0707200 46 DIIIKNR|RG 0.086 . PBANKA_0707200 47 IIIKNRR|GE 0.089 . PBANKA_0707200 50 KNRRGEK|LR 0.098 . PBANKA_0707200 52 RRGEKLR|CC 0.102 . PBANKA_0707200 113 DGYYSTK|GW 0.074 . PBANKA_0707200 129 LILNHLR|NV 0.127 . PBANKA_0707200 133 HLRNVEK|IK 0.076 . PBANKA_0707200 135 RNVEKIK|NI 0.071 . PBANKA_0707200 142 NIVLWGK|HS 0.074 . PBANKA_0707200 157 IAAALDR|NI 0.082 . PBANKA_0707200 160 ALDRNIK|ML 0.095 . PBANKA_0707200 176 SLIELYK|TT 0.058 . PBANKA_0707200 184 TFNLCAK|KK 0.067 . PBANKA_0707200 185 FNLCAKK|KN 0.102 . PBANKA_0707200 186 NLCAKKK|NE 0.093 . PBANKA_0707200 192 KNEIIFK|NI 0.064 . PBANKA_0707200 200 ICLYFTR|RK 0.076 . PBANKA_0707200 201 CLYFTRR|KI 0.149 . PBANKA_0707200 202 LYFTRRK|IK 0.068 . PBANKA_0707200 204 FTRRKIK|KK 0.124 . PBANKA_0707200 205 TRRKIKK|KF 0.133 . PBANKA_0707200 206 RRKIKKK|FN 0.197 . PBANKA_0707200 233 TIYIISK|SD 0.103 . PBANKA_0707200 249 SLYLAYK|QK 0.065 . PBANKA_0707200 251 YLAYKQK|KA 0.082 . PBANKA_0707200 252 LAYKQKK|AK 0.111 . PBANKA_0707200 254 YKQKKAK|KI 0.084 . PBANKA_0707200 255 KQKKAKK|II 0.156 . PBANKA_0707200 262 IIYIAEK|GS 0.070 . PBANKA_0707200 275 AYTYDSK|LI 0.058 . PBANKA_0707200 281 KLIIAMK|SI 0.081 . PBANKA_0707200 294 NFENDIR|DK 0.090 . PBANKA_0707200 296 ENDIRDK|IF 0.059 . PBANKA_0707200 305 DLSTYYK|LF 0.061 . PBANKA_0707200 311 KLFTFLR|EK 0.100 . PBANKA_0707200 313 FTFLREK|YA 0.060 . PBANKA_0707200 323 EFDYIDR|LI 0.092 . PBANKA_0707200 327 IDRLITK|KI 0.070 . PBANKA_0707200 328 DRLITKK|IN 0.087 . PBANKA_0707200 332 TKKINQK|NK 0.059 . PBANKA_0707200 334 KINQKNK|II 0.100 . PBANKA_0707200 338 KNKIIDK|VK 0.055 . PBANKA_0707200 340 KIIDKVK|KF 0.059 . PBANKA_0707200 341 IIDKVKK|FV 0.196 . PBANKA_0707200 346 KKFVCFK|YQ 0.068 . PBANKA_0707200 350 CFKYQSK|LS 0.055 . PBANKA_0707200 368 STVDSLR|TS 0.085 . PBANKA_0707200 371 DSLRTSK|VY 0.105 . PBANKA_0707200 380 ENEYTFK|TE 0.066 . PBANKA_0707200 432 TYYYIDK|FN 0.067 . PBANKA_0707200 435 YIDKFNK|LN 0.063 . PBANKA_0707200 442 LNEHNNK|FE 0.087 . PBANKA_0707200 452 IQGTSEK|PF 0.060 . PBANKA_0707200 455 TSEKPFK|LL 0.070 . PBANKA_0707200 463 LHMQSSR|SS 0.138 . PBANKA_0707200 467 SSRSSLK|SN 0.077 . PBANKA_0707200 470 SSLKSNK|NT 0.068 . PBANKA_0707200 474 SNKNTYK|KS 0.064 . PBANKA_0707200 475 NKNTYKK|SL 0.162 . PBANKA_0707200 491 SSITYFK|ED 0.063 . PBANKA_0707200 500 CPLNLQK|N- 0.064 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0707200 ATGTTTCATTTATACGAATTGCTTATGTTTTTTTTAAGACACCCAAGAGATAAATATGAT GAAGCATTTTTAGGTCCAATTTTTTTGCATTTTTATGATAAAAACTATTATAGAAGGGAT ATAATAATAAAAAATCGAAGAGGAGAAAAATTAAGATGTTGTTTTTTTACACCTTTTAAT TATAGTGAAAATACACCTTGTGTTATATACACACATTCTACTAGTAGTTGTCAATTAGAA GTTTTAGATATATTACATATTCTTTTAGTTTGTGAATGCTCAGTTTTTTCATTTGATTGT GCAGGTTGTGGATTGTCAGATGGATATTATTCAACGAAAGGTTGGAATGAAAGCCAAGAC TTATATTTAATTTTAAATCATTTAAGAAATGTAGAAAAAATAAAAAATATTGTTCTTTGG GGAAAACATTCCGGAGCAGCGAGTTCGATAATAGCAGCCGCTTTGGATCGGAATATAAAG ATGTTGATTTTGGAATCCCCTTTTGTATCCTTAATTGAATTGTATAAAACAACATTTAAC TTGTGTGCAAAAAAAAAAAATGAAATAATTTTCAAAAATATTTGTTTATATTTTACAAGA AGAAAAATAAAAAAAAAATTTAACTACGATATAAATAATGTATGTCCAGTATTTTTTATT GAAGACATAACAATTCCAACGATTTATATAATTTCAAAAAGTGATAGTATTGTTCATCCT GCTCATTCATTATATTTAGCATATAAGCAGAAAAAAGCAAAAAAAATAATTTACATAGCC GAAAAAGGATCACAACCATATGAAGCATATACATATGATAGTAAATTAATAATAGCTATG AAATCTATATTATATAGTTATAATTTTGAAAATGATATAAGAGATAAAATATTTGATTTG TCTACATATTATAAATTATTTACATTTTTAAGAGAAAAGTATGCATATGAATTTGATTAT ATTGATAGATTAATAACTAAAAAAATTAATCAAAAAAATAAAATAATTGACAAAGTAAAG AAGTTTGTTTGTTTTAAATATCAGTCAAAGCTTTCGCTTAGTTCTTCCACATATTTAAAC CAATCCACTGTGGATTCTTTGCGTACCTCAAAAGTCTACGAAAATGAATATACATTTAAA ACAGAAGAAAATAATAATGATTCTATACAAGCATGTGGCCAAATTAACAGTTCAGGATTT TCTAACGATTATCAAGATGTATTTTCAGATGACGATAATATGCTAGATAATCCAACTGAA AATAATCACATGCACACATATTATTATATAGATAAATTCAACAAATTAAATGAACATAAT AATAAATTTGAAGAAATTCAAGGAACTAGCGAAAAACCTTTCAAATTATTGCATATGCAA AGCTCACGAAGTTCTTTAAAATCAAATAAAAATACTTATAAAAAGTCTCTAACATGGAAT AGCAACTTGCAAAGTTCTATTACATATTTCAAGGAAGATTGCCCATTAAATCTCCAAAAA AATTAA
  • Download Fasta

  • Fasta :-

    MFHLYELLMFFLRHPRDKYDEAFLGPIFLHFYDKNYYRRDIIIKNRRGEKLRCCFFTPFN YSENTPCVIYTHSTSSCQLEVLDILHILLVCECSVFSFDCAGCGLSDGYYSTKGWNESQD LYLILNHLRNVEKIKNIVLWGKHSGAASSIIAAALDRNIKMLILESPFVSLIELYKTTFN LCAKKKNEIIFKNICLYFTRRKIKKKFNYDINNVCPVFFIEDITIPTIYIISKSDSIVHP AHSLYLAYKQKKAKKIIYIAEKGSQPYEAYTYDSKLIIAMKSILYSYNFENDIRDKIFDL STYYKLFTFLREKYAYEFDYIDRLITKKINQKNKIIDKVKKFVCFKYQSKLSLSSSTYLN QSTVDSLRTSKVYENEYTFKTEENNNDSIQACGQINSSGFSNDYQDVFSDDDNMLDNPTE NNHMHTYYYIDKFNKLNEHNNKFEEIQGTSEKPFKLLHMQSSRSSLKSNKNTYKKSLTWN SNLQSSITYFKEDCPLNLQKN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0707200468 SSSLKSNKNT0.996unspPBANKA_0707200468 SSSLKSNKNT0.996unspPBANKA_0707200468 SSSLKSNKNT0.996unspPBANKA_0707200362 SYLNQSTVDS0.991unspPBANKA_0707200465 SSSRSSLKSN0.998unsp

PBANKA_070720      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India