PBANKA_0820100 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_0820100OTHER0.9932460.0061310.000623
No Results

  • Fasta :-

    >PBANKA_0820100 MSIYLHTYILDVPFFLKNVRHTGIEVFGNEYTFSMDGIITSKPKRSGIGRYSKSYELESM KLTYYEFSEILNVLGKIYRPNTYNFIYKNCNHFCDDLFELLCGKRLLHSFMIYSRLGKFF GNFKNVAMCGSINTMDITKDDKNMYICALRLSKSILKKNKNIIKKKTILYQNKINEDTNH NFIHQPSYIIPYNPIISPNMYCNPNILTGSTKSSKYEKCFNDFSTNTYNTLYSLSTTDGF SFP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0820100.fa Sequence name : PBANKA_0820100 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 4.052 CoefTot : -1.167 ChDiff : 11 ZoneTo : 24 KR : 2 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.459 0.935 -0.079 0.462 MesoH : -0.801 0.113 -0.467 0.125 MuHd_075 : 22.203 20.265 7.769 5.947 MuHd_095 : 13.341 14.163 6.732 3.311 MuHd_100 : 20.544 21.176 8.668 5.520 MuHd_105 : 27.144 24.574 9.181 6.940 Hmax_075 : 21.817 22.200 4.424 7.880 Hmax_095 : 3.500 14.700 0.061 3.754 Hmax_100 : 16.900 22.000 3.700 7.260 Hmax_105 : 10.700 27.183 4.767 5.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8951 0.1049 DFMC : 0.9319 0.0681
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 PBANKA_0820100 MSIYLHTYILDVPFFLKNVRHTGIEVFGNEYTFSMDGIITSKPKRSGIGRYSKSYELESMKLTYYEFSEILNVLGKIYRP 80 NTYNFIYKNCNHFCDDLFELLCGKRLLHSFMIYSRLGKFFGNFKNVAMCGSINTMDITKDDKNMYICALRLSKSILKKNK 160 NIIKKKTILYQNKINEDTNHNFIHQPSYIIPYNPIISPNMYCNPNILTGSTKSSKYEKCFNDFSTNTYNTLYSLSTTDGF 240 SFP 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0820100 17 DVPFFLK|NV 0.069 . PBANKA_0820100 20 FFLKNVR|HT 0.098 . PBANKA_0820100 42 DGIITSK|PK 0.060 . PBANKA_0820100 44 IITSKPK|RS 0.074 . PBANKA_0820100 45 ITSKPKR|SG 0.314 . PBANKA_0820100 50 KRSGIGR|YS 0.170 . PBANKA_0820100 53 GIGRYSK|SY 0.185 . PBANKA_0820100 61 YELESMK|LT 0.060 . PBANKA_0820100 76 ILNVLGK|IY 0.069 . PBANKA_0820100 79 VLGKIYR|PN 0.083 . PBANKA_0820100 88 TYNFIYK|NC 0.070 . PBANKA_0820100 104 FELLCGK|RL 0.055 . PBANKA_0820100 105 ELLCGKR|LL 0.100 . PBANKA_0820100 115 SFMIYSR|LG 0.068 . PBANKA_0820100 118 IYSRLGK|FF 0.181 . PBANKA_0820100 124 KFFGNFK|NV 0.066 . PBANKA_0820100 139 NTMDITK|DD 0.061 . PBANKA_0820100 142 DITKDDK|NM 0.054 . PBANKA_0820100 150 MYICALR|LS 0.074 . PBANKA_0820100 153 CALRLSK|SI 0.168 . PBANKA_0820100 157 LSKSILK|KN 0.058 . PBANKA_0820100 158 SKSILKK|NK 0.120 . PBANKA_0820100 160 SILKKNK|NI 0.076 . PBANKA_0820100 164 KNKNIIK|KK 0.062 . PBANKA_0820100 165 NKNIIKK|KT 0.111 . PBANKA_0820100 166 KNIIKKK|TI 0.116 . PBANKA_0820100 173 TILYQNK|IN 0.076 . PBANKA_0820100 212 ILTGSTK|SS 0.073 . PBANKA_0820100 215 GSTKSSK|YE 0.061 . PBANKA_0820100 218 KSSKYEK|CF 0.073 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0820100 ATGAGTATCTATTTACATACATATATTTTGGATGTCCCTTTTTTCTTGAAAAATGTTCGC CACACAGGAATTGAGGTTTTTGGAAACGAATATACATTTTCAATGGATGGTATAATAACA AGCAAACCAAAAAGATCAGGAATAGGACGGTATAGTAAAAGTTATGAATTAGAATCTATG AAGTTAACATATTATGAATTTTCTGAAATTTTAAATGTTCTTGGAAAAATATATAGACCT AATACATATAATTTTATATACAAAAATTGTAATCATTTTTGTGATGATTTATTTGAACTA TTATGCGGAAAAAGGTTATTACATAGTTTTATGATTTATTCAAGATTAGGTAAGTTCTTT GGGAACTTTAAAAATGTAGCAATGTGCGGATCTATTAATACTATGGATATAACAAAAGAT GATAAAAATATGTATATATGTGCTTTAAGATTATCAAAATCAATACTTAAAAAAAATAAA AATATAATTAAAAAAAAAACAATATTGTATCAAAATAAAATAAATGAAGATACAAATCAC AATTTTATTCACCAACCTTCATATATTATTCCCTATAACCCGATTATATCACCAAATATG TATTGTAACCCAAACATATTAACAGGATCGACAAAAAGTTCAAAATATGAAAAATGTTTC AACGATTTTAGCACAAACACATATAATACATTATATTCGTTAAGCACAACTGACGGGTTT TCTTTTCCATAA
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  • Fasta :-

    No Results
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No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0820100213 SGSTKSSKYE0.99unspPBANKA_0820100214 SSTKSSKYEK0.993unsp

PBANKA_082010      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India