PBANKA_0907300 | OTU domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_0907300OTHER0.9999110.0000030.000086
No Results

  • Fasta :-

    >PBANKA_0907300 MNEELKKINYNEYKRRLKKLSEEITKEKKKKTIHKDKQNENILKLEEELKKLNELYNGKN NDNNTIIEQNNYNDNNMIPDNLYSYNVISKKSLKNKAKMKKKEMEEELNEQSRSKIGEEE YNKLLEILKIKNQTIYSIAPDGNCLYESIIHQLKQRIKNFKYSKNNFLQIINQDNFSLNI IDLKNYQQNKHILDFSIFESFDPNHLTSDILRFITSVYILQNSDLFANFIYEYTEQDIND PCYNYCQQIMNGIYGSEIEITALSNILKKKITVQDINMSVSYGENYKEELFICFHHKLYT LGKHYNSVIDL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0907300.fa Sequence name : PBANKA_0907300 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 3.479 CoefTot : -0.134 ChDiff : 0 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.347 0.947 -0.090 0.415 MesoH : -0.895 0.035 -0.450 0.182 MuHd_075 : 11.540 5.409 3.348 3.744 MuHd_095 : 32.481 18.617 9.333 6.448 MuHd_100 : 17.963 10.523 5.903 3.091 MuHd_105 : 2.130 6.037 1.039 0.964 Hmax_075 : -23.800 -7.400 -8.587 -0.960 Hmax_095 : -9.450 1.050 -4.561 0.420 Hmax_100 : -20.800 -4.800 -7.437 -1.620 Hmax_105 : -20.800 -4.800 -7.437 -1.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9553 0.0447 DFMC : 0.9780 0.0220
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 PBANKA_0907300 MNEELKKINYNEYKRRLKKLSEEITKEKKKKTIHKDKQNENILKLEEELKKLNELYNGKNNDNNTIIEQNNYNDNNMIPD 80 NLYSYNVISKKSLKNKAKMKKKEMEEELNEQSRSKIGEEEYNKLLEILKIKNQTIYSIAPDGNCLYESIIHQLKQRIKNF 160 KYSKNNFLQIINQDNFSLNIIDLKNYQQNKHILDFSIFESFDPNHLTSDILRFITSVYILQNSDLFANFIYEYTEQDIND 240 PCYNYCQQIMNGIYGSEIEITALSNILKKKITVQDINMSVSYGENYKEELFICFHHKLYTLGKHYNSVIDL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0907300 6 -MNEELK|KI 0.062 . PBANKA_0907300 7 MNEELKK|IN 0.087 . PBANKA_0907300 14 INYNEYK|RR 0.064 . PBANKA_0907300 15 NYNEYKR|RL 0.115 . PBANKA_0907300 16 YNEYKRR|LK 0.141 . PBANKA_0907300 18 EYKRRLK|KL 0.136 . PBANKA_0907300 19 YKRRLKK|LS 0.389 . PBANKA_0907300 26 LSEEITK|EK 0.061 . PBANKA_0907300 28 EEITKEK|KK 0.062 . PBANKA_0907300 29 EITKEKK|KK 0.079 . PBANKA_0907300 30 ITKEKKK|KT 0.123 . PBANKA_0907300 31 TKEKKKK|TI 0.181 . PBANKA_0907300 35 KKKTIHK|DK 0.076 . PBANKA_0907300 37 KTIHKDK|QN 0.090 . PBANKA_0907300 44 QNENILK|LE 0.059 . PBANKA_0907300 50 KLEEELK|KL 0.060 . PBANKA_0907300 51 LEEELKK|LN 0.078 . PBANKA_0907300 59 NELYNGK|NN 0.057 . PBANKA_0907300 90 SYNVISK|KS 0.059 . PBANKA_0907300 91 YNVISKK|SL 0.166 . PBANKA_0907300 94 ISKKSLK|NK 0.062 . PBANKA_0907300 96 KKSLKNK|AK 0.106 . PBANKA_0907300 98 SLKNKAK|MK 0.089 . PBANKA_0907300 100 KNKAKMK|KK 0.083 . PBANKA_0907300 101 NKAKMKK|KE 0.124 . PBANKA_0907300 102 KAKMKKK|EM 0.149 . PBANKA_0907300 113 ELNEQSR|SK 0.171 . PBANKA_0907300 115 NEQSRSK|IG 0.064 . PBANKA_0907300 123 GEEEYNK|LL 0.055 . PBANKA_0907300 129 KLLEILK|IK 0.057 . PBANKA_0907300 131 LEILKIK|NQ 0.058 . PBANKA_0907300 154 SIIHQLK|QR 0.063 . PBANKA_0907300 156 IHQLKQR|IK 0.081 . PBANKA_0907300 158 QLKQRIK|NF 0.062 . PBANKA_0907300 161 QRIKNFK|YS 0.079 . PBANKA_0907300 164 KNFKYSK|NN 0.062 . PBANKA_0907300 184 LNIIDLK|NY 0.062 . PBANKA_0907300 190 KNYQQNK|HI 0.064 . PBANKA_0907300 212 LTSDILR|FI 0.112 . PBANKA_0907300 268 ALSNILK|KK 0.073 . PBANKA_0907300 269 LSNILKK|KI 0.120 . PBANKA_0907300 270 SNILKKK|IT 0.143 . PBANKA_0907300 287 SYGENYK|EE 0.055 . PBANKA_0907300 297 FICFHHK|LY 0.067 . PBANKA_0907300 303 KLYTLGK|HY 0.074 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0907300 ATGAATGAGGAGCTAAAGAAAATAAATTATAATGAATACAAAAGAAGACTAAAAAAATTA TCAGAAGAAATAACAAAAGAAAAAAAAAAAAAAACAATTCATAAGGATAAACAAAATGAA AATATATTAAAACTAGAAGAGGAACTAAAAAAATTGAATGAATTATACAATGGAAAAAAT AATGATAATAATACAATAATAGAACAAAATAACTATAATGATAATAATATGATACCTGAT AATTTATATTCATATAATGTTATTTCAAAAAAATCCTTAAAAAATAAAGCAAAAATGAAA AAAAAAGAAATGGAAGAAGAATTAAATGAGCAATCAAGAAGTAAAATTGGAGAAGAAGAA TATAATAAATTGTTAGAAATTTTAAAAATTAAAAATCAAACAATTTATTCTATAGCACCA GATGGTAATTGTTTATATGAATCTATTATACACCAACTTAAACAAAGAATTAAAAATTTT AAATATTCTAAAAACAACTTTTTACAAATTATAAATCAAGACAACTTTTCATTAAATATT ATAGATTTAAAAAATTATCAACAAAATAAGCATATTTTAGATTTTTCGATTTTTGAAAGT TTTGATCCAAATCATTTAACTAGCGACATACTGAGGTTTATTACTTCAGTATATATATTA CAAAATAGTGATTTATTCGCCAATTTTATTTATGAATATACAGAACAAGATATTAATGAT CCATGCTATAATTATTGTCAACAAATTATGAATGGAATATATGGGAGTGAAATTGAAATA ACAGCTTTGTCAAATATTTTGAAGAAAAAAATTACAGTACAAGATATAAATATGAGTGTA TCATATGGGGAAAATTATAAAGAAGAATTATTTATATGTTTCCATCACAAGCTATATACG CTGGGAAAGCACTACAATTCTGTTATAGACTTATGA
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  • Fasta :-

    MNEELKKINYNEYKRRLKKLSEEITKEKKKKTIHKDKQNENILKLEEELKKLNELYNGKN NDNNTIIEQNNYNDNNMIPDNLYSYNVISKKSLKNKAKMKKKEMEEELNEQSRSKIGEEE YNKLLEILKIKNQTIYSIAPDGNCLYESIIHQLKQRIKNFKYSKNNFLQIINQDNFSLNI IDLKNYQQNKHILDFSIFESFDPNHLTSDILRFITSVYILQNSDLFANFIYEYTEQDIND PCYNYCQQIMNGIYGSEIEITALSNILKKKITVQDINMSVSYGENYKEELFICFHHKLYT LGKHYNSVIDL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0907300307 SKHYNSVIDL0.992unspPBANKA_0907300307 SKHYNSVIDL0.992unspPBANKA_0907300307 SKHYNSVIDL0.992unspPBANKA_090730021 SLKKLSEEIT0.995unspPBANKA_0907300281 SNMSVSYGEN0.99unsp

PBANKA_090730      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India