PBANKA_0917900 | 26S protease regulatory subunit 6A, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0917900OTHER0.9999870.0000040.000009
No Results

  • Fasta :-

    >PBANKA_0917900 MNVENIFENEQVNVEEIEVLSNPEIRTRISLIDTEIKILKNEHTRLKNEYKNIQEKIKDN VEKIHLNKMLPYLVANVVESLDLQDEEDEQEPKDEYDLYDNPNITNNNIYGNISKNIPEE GFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSYLIIDKLPPEY DNRVKAMEVIEKPTEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGP PGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDEL DAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDETVKVIAATNRPDTLDPALLRSGRL DRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIAL RRGATEIDHEDFIEGITSVLSKKKSTLNYFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0917900.fa Sequence name : PBANKA_0917900 Sequence length : 451 VALUES OF COMPUTED PARAMETERS Coef20 : 3.138 CoefTot : -0.134 ChDiff : -21 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.012 -0.103 0.465 MesoH : -0.580 0.277 -0.410 0.197 MuHd_075 : 20.448 15.151 5.456 4.392 MuHd_095 : 13.820 12.112 4.438 3.340 MuHd_100 : 20.350 17.478 6.874 4.745 MuHd_105 : 23.188 18.964 7.812 5.159 Hmax_075 : -1.050 6.475 -2.641 2.949 Hmax_095 : -5.337 8.487 -2.678 3.447 Hmax_100 : 2.100 13.200 -0.619 4.720 Hmax_105 : 2.100 13.200 -0.619 4.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9731 0.0269 DFMC : 0.9645 0.0355
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 451 PBANKA_0917900 MNVENIFENEQVNVEEIEVLSNPEIRTRISLIDTEIKILKNEHTRLKNEYKNIQEKIKDNVEKIHLNKMLPYLVANVVES 80 LDLQDEEDEQEPKDEYDLYDNPNITNNNIYGNISKNIPEEGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIEASELKPG 160 DLVGVNKDSYLIIDKLPPEYDNRVKAMEVIEKPTEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGP 240 PGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQR 320 TMLELLNQLDGFSTDETVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARST 400 DDFNGAQLKAVCVEAGMIALRRGATEIDHEDFIEGITSVLSKKKSTLNYFT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0917900 26 LSNPEIR|TR 0.102 . PBANKA_0917900 28 NPEIRTR|IS 0.076 . PBANKA_0917900 37 LIDTEIK|IL 0.057 . PBANKA_0917900 40 TEIKILK|NE 0.064 . PBANKA_0917900 45 LKNEHTR|LK 0.092 . PBANKA_0917900 47 NEHTRLK|NE 0.061 . PBANKA_0917900 51 RLKNEYK|NI 0.077 . PBANKA_0917900 56 YKNIQEK|IK 0.082 . PBANKA_0917900 58 NIQEKIK|DN 0.078 . PBANKA_0917900 63 IKDNVEK|IH 0.063 . PBANKA_0917900 68 EKIHLNK|ML 0.062 . PBANKA_0917900 93 EDEQEPK|DE 0.066 . PBANKA_0917900 115 IYGNISK|NI 0.061 . PBANKA_0917900 123 IPEEGFR|DI 0.139 . PBANKA_0917900 129 RDIDDEK|RG 0.053 . PBANKA_0917900 130 DIDDEKR|GK 0.176 . PBANKA_0917900 132 DDEKRGK|CM 0.059 . PBANKA_0917900 137 GKCMVIK|TS 0.070 . PBANKA_0917900 141 VIKTSTR|QT 0.078 . PBANKA_0917900 158 IEASELK|PG 0.062 . PBANKA_0917900 167 DLVGVNK|DS 0.072 . PBANKA_0917900 175 SYLIIDK|LP 0.051 . PBANKA_0917900 183 PPEYDNR|VK 0.071 . PBANKA_0917900 185 EYDNRVK|AM 0.069 . PBANKA_0917900 192 AMEVIEK|PT 0.070 . PBANKA_0917900 205 DIGGLDK|QI 0.070 . PBANKA_0917900 221 VLPMLHK|EK 0.060 . PBANKA_0917900 223 PMLHKEK|FE 0.066 . PBANKA_0917900 226 HKEKFEK|IG 0.065 . PBANKA_0917900 230 FEKIGIK|PP 0.070 . PBANKA_0917900 233 IGIKPPK|GV 0.100 . PBANKA_0917900 245 GPPGTGK|TL 0.059 . PBANKA_0917900 250 GKTLLAR|AC 0.090 . PBANKA_0917900 262 TNATFLK|LA 0.118 . PBANKA_0917900 278 FIGDGAK|MV 0.085 . PBANKA_0917900 281 DGAKMVR|DA 0.122 . PBANKA_0917900 288 DAFNLAK|EK 0.067 . PBANKA_0917900 290 FNLAKEK|AP 0.061 . PBANKA_0917900 306 LDAIGTK|RF 0.062 . PBANKA_0917900 307 DAIGTKR|FD 0.174 . PBANKA_0917900 316 SELSGDR|EV 0.080 . PBANKA_0917900 320 GDREVQR|TM 0.096 . PBANKA_0917900 339 STDETVK|VI 0.057 . PBANKA_0917900 346 VIAATNR|PD 0.077 . PBANKA_0917900 356 LDPALLR|SG 0.086 . PBANKA_0917900 359 ALLRSGR|LD 0.220 . PBANKA_0917900 362 RSGRLDR|KI 0.247 . PBANKA_0917900 363 SGRLDRK|IE 0.071 . PBANKA_0917900 374 HPNEESR|AR 0.108 . PBANKA_0917900 376 NEESRAR|IL 0.090 . PBANKA_0917900 383 ILQIHSR|KM 0.090 . PBANKA_0917900 384 LQIHSRK|MN 0.092 . PBANKA_0917900 389 RKMNVHK|DV 0.132 . PBANKA_0917900 398 NFEELAR|ST 0.126 . PBANKA_0917900 409 FNGAQLK|AV 0.088 . PBANKA_0917900 421 AGMIALR|RG 0.095 . PBANKA_0917900 422 GMIALRR|GA 0.209 . PBANKA_0917900 442 ITSVLSK|KK 0.071 . PBANKA_0917900 443 TSVLSKK|KS 0.096 . PBANKA_0917900 444 SVLSKKK|ST 0.150 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0917900 ATGAATGTAGAAAATATATTTGAAAATGAACAAGTAAATGTAGAAGAAATAGAAGTATTA TCAAACCCAGAAATACGAACCAGAATTAGCCTAATTGATACAGAAATAAAAATCTTAAAA AATGAACATACACGATTAAAAAATGAATATAAAAATATACAAGAAAAAATAAAAGATAAT GTTGAAAAAATACATTTAAATAAAATGCTTCCATATTTAGTTGCTAATGTTGTTGAATCT TTAGATTTACAAGATGAAGAAGATGAACAAGAACCCAAAGATGAATATGATTTATATGAT AATCCTAACATTACTAATAATAATATTTATGGAAATATATCAAAGAATATCCCTGAAGAA GGTTTTCGTGATATTGATGATGAAAAAAGAGGAAAATGTATGGTAATAAAAACATCAACA AGGCAAACTATATTTCTTCCTGTTCCTGGCCTTATCGAAGCATCTGAATTAAAACCGGGA GATTTAGTTGGTGTAAATAAAGATAGTTATTTAATAATTGATAAATTACCTCCTGAATAT GATAATAGAGTTAAAGCTATGGAAGTTATAGAAAAGCCAACTGAAGATTATTCAGATATT GGTGGATTAGATAAACAAATTGAAGATTTAGTGGAAGCCATTGTTTTACCTATGTTACAT AAAGAAAAGTTTGAAAAAATCGGAATAAAACCTCCTAAAGGGGTTTTAATGCATGGACCA CCAGGAACAGGAAAAACTTTATTAGCAAGAGCTTGTGCATCTCAAACAAATGCAACTTTT TTAAAATTAGCTGGACCCCAATTAGTTCAAATGTTTATTGGTGATGGTGCAAAAATGGTG AGAGATGCTTTTAATTTAGCAAAAGAAAAAGCACCTGCTATTATTTTTATAGATGAATTA GATGCAATTGGAACAAAAAGATTTGATAGTGAACTATCAGGGGATAGAGAAGTACAAAGA ACTATGTTAGAACTTCTAAATCAATTAGATGGTTTTAGTACAGATGAAACTGTTAAAGTT ATTGCAGCGACTAATAGACCCGATACTTTAGATCCCGCATTATTAAGATCAGGACGATTA GATAGAAAAATCGAATTACCACATCCAAATGAAGAATCTAGAGCTAGGATTTTACAAATA CATTCAAGAAAAATGAATGTACATAAAGATGTTAATTTTGAAGAACTAGCCAGGTCTACT GACGATTTTAATGGTGCACAATTAAAAGCTGTTTGTGTCGAAGCAGGAATGATAGCTTTG AGAAGGGGTGCAACTGAAATAGATCATGAAGATTTTATTGAAGGTATTACTTCAGTTTTA TCCAAAAAGAAAAGCACACTTAATTATTTTACCTAA
  • Download Fasta

  • Fasta :-

    MNVENIFENEQVNVEEIEVLSNPEIRTRISLIDTEIKILKNEHTRLKNEYKNIQEKIKDN VEKIHLNKMLPYLVANVVESLDLQDEEDEQEPKDEYDLYDNPNITNNNIYGNISKNIPEE GFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSYLIIDKLPPEY DNRVKAMEVIEKPTEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGP PGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDEL DAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDETVKVIAATNRPDTLDPALLRSGRL DRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIAL RRGATEIDHEDFIEGITSVLSKKKSTLNYFT

  • title: ATP binding site
  • coordinates: P240,P241,G242,T243,G244,K245,T246,L247,D298,N345
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_0917900441 STSVLSKKKS0.995unspPBANKA_0917900441 STSVLSKKKS0.995unspPBANKA_0917900441 STSVLSKKKS0.995unspPBANKA_091790030 SRTRISLIDT0.998unspPBANKA_0917900310 SKRFDSELSG0.994unsp

PBANKA_091790      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India