PBANKA_0919500 | GPI-anchor transamidase, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0919500SP0.0393960.9603180.000286CS pos: 20-21. AIG-SI. Pr: 0.9395
No Results

  • Fasta :-

    >PBANKA_0919500 MEVKIGIVIYLLIAIKCAIGSIYFSGIDIKNMKSKYEEIKNSNNKQNVNEIFLKELKKYN YINSNAIALSTSRHYFNYRHTANLLIAYKYLKNNGDIMDKNILLMIPFDQACNCRNIIEG TIFKKYEKFPNEYINKNMEESLYNKLNIDYKNDNINDEQLRKVIRHRYNSFTPYKNRLYT NEYNEKNLFIYITGHGGIHFLKIQEFNIISSSEFNLYIQELLIKDIYKNIFVIIDTCQGY SFYDDILAFINQNKIKNVFLLSSSNRNENSYSLFSSKYLSVSTVDRFTYNFFDYIENIHK MKSKEIYKNLKFFSLQNILNYLKTQNLMSHPSINNSKFNVSSFLHDQNVIFYDSNMLFPK FFFNKFNNNQNYPNNNHDNNNSEQTCFGYLGICGHIKSQIYLNMESLYNDRSYYNNDDVY NSYEFYFTDKCFNFKYFDIYYMAIFLILLFVILLFLIVFMLY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0919500.fa Sequence name : PBANKA_0919500 Sequence length : 462 VALUES OF COMPUTED PARAMETERS Coef20 : 4.111 CoefTot : -0.773 ChDiff : 7 ZoneTo : 27 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 3.094 3.665 0.649 1.167 MesoH : -0.419 0.501 -0.335 0.325 MuHd_075 : 14.559 15.591 5.044 5.318 MuHd_095 : 11.633 12.735 4.312 3.977 MuHd_100 : 12.914 17.192 3.570 3.930 MuHd_105 : 13.789 19.104 3.749 4.550 Hmax_075 : 17.733 24.850 6.252 7.000 Hmax_095 : 17.412 24.937 4.760 8.015 Hmax_100 : 19.400 29.800 5.495 8.900 Hmax_105 : 20.767 27.650 6.099 8.330 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9968 0.0032 DFMC : 0.9990 0.0010
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 462 PBANKA_0919500 MEVKIGIVIYLLIAIKCAIGSIYFSGIDIKNMKSKYEEIKNSNNKQNVNEIFLKELKKYNYINSNAIALSTSRHYFNYRH 80 TANLLIAYKYLKNNGDIMDKNILLMIPFDQACNCRNIIEGTIFKKYEKFPNEYINKNMEESLYNKLNIDYKNDNINDEQL 160 RKVIRHRYNSFTPYKNRLYTNEYNEKNLFIYITGHGGIHFLKIQEFNIISSSEFNLYIQELLIKDIYKNIFVIIDTCQGY 240 SFYDDILAFINQNKIKNVFLLSSSNRNENSYSLFSSKYLSVSTVDRFTYNFFDYIENIHKMKSKEIYKNLKFFSLQNILN 320 YLKTQNLMSHPSINNSKFNVSSFLHDQNVIFYDSNMLFPKFFFNKFNNNQNYPNNNHDNNNSEQTCFGYLGICGHIKSQI 400 YLNMESLYNDRSYYNNDDVYNSYEFYFTDKCFNFKYFDIYYMAIFLILLFVILLFLIVFMLY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0919500 4 ---MEVK|IG 0.058 . PBANKA_0919500 16 YLLIAIK|CA 0.061 . PBANKA_0919500 30 FSGIDIK|NM 0.058 . PBANKA_0919500 33 IDIKNMK|SK 0.087 . PBANKA_0919500 35 IKNMKSK|YE 0.093 . PBANKA_0919500 40 SKYEEIK|NS 0.069 . PBANKA_0919500 45 IKNSNNK|QN 0.067 . PBANKA_0919500 54 VNEIFLK|EL 0.061 . PBANKA_0919500 57 IFLKELK|KY 0.056 . PBANKA_0919500 58 FLKELKK|YN 0.094 . PBANKA_0919500 73 IALSTSR|HY 0.092 . PBANKA_0919500 79 RHYFNYR|HT 0.098 . PBANKA_0919500 89 NLLIAYK|YL 0.067 . PBANKA_0919500 92 IAYKYLK|NN 0.073 . PBANKA_0919500 100 NGDIMDK|NI 0.056 . PBANKA_0919500 115 DQACNCR|NI 0.104 . PBANKA_0919500 124 IEGTIFK|KY 0.063 . PBANKA_0919500 125 EGTIFKK|YE 0.073 . PBANKA_0919500 128 IFKKYEK|FP 0.059 . PBANKA_0919500 136 PNEYINK|NM 0.065 . PBANKA_0919500 145 EESLYNK|LN 0.062 . PBANKA_0919500 151 KLNIDYK|ND 0.066 . PBANKA_0919500 161 INDEQLR|KV 0.104 . PBANKA_0919500 162 NDEQLRK|VI 0.075 . PBANKA_0919500 165 QLRKVIR|HR 0.093 . PBANKA_0919500 167 RKVIRHR|YN 0.097 . PBANKA_0919500 175 NSFTPYK|NR 0.054 . PBANKA_0919500 177 FTPYKNR|LY 0.082 . PBANKA_0919500 186 TNEYNEK|NL 0.072 . PBANKA_0919500 202 GGIHFLK|IQ 0.065 . PBANKA_0919500 224 IQELLIK|DI 0.075 . PBANKA_0919500 228 LIKDIYK|NI 0.079 . PBANKA_0919500 254 AFINQNK|IK 0.064 . PBANKA_0919500 256 INQNKIK|NV 0.091 . PBANKA_0919500 266 LLSSSNR|NE 0.081 . PBANKA_0919500 277 YSLFSSK|YL 0.074 . PBANKA_0919500 286 SVSTVDR|FT 0.127 . PBANKA_0919500 300 YIENIHK|MK 0.062 . PBANKA_0919500 302 ENIHKMK|SK 0.097 . PBANKA_0919500 304 IHKMKSK|EI 0.089 . PBANKA_0919500 308 KSKEIYK|NL 0.056 . PBANKA_0919500 311 EIYKNLK|FF 0.064 . PBANKA_0919500 323 NILNYLK|TQ 0.050 . PBANKA_0919500 337 PSINNSK|FN 0.065 . PBANKA_0919500 360 SNMLFPK|FF 0.082 . PBANKA_0919500 365 PKFFFNK|FN 0.070 . PBANKA_0919500 397 GICGHIK|SQ 0.077 . PBANKA_0919500 411 ESLYNDR|SY 0.094 . PBANKA_0919500 430 EFYFTDK|CF 0.060 . PBANKA_0919500 435 DKCFNFK|YF 0.074 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0919500 ATGGAGGTAAAAATTGGAATAGTTATATATTTATTGATAGCAATAAAATGCGCAATTGGA TCGATTTATTTTTCTGGTATAGACATAAAAAATATGAAAAGTAAATATGAAGAAATAAAA AATAGTAATAATAAACAAAATGTAAACGAAATATTTTTAAAAGAATTAAAAAAATATAAT TATATTAATAGTAATGCTATAGCATTAAGTACATCAAGACATTATTTTAATTACAGGCAT ACAGCTAATTTATTAATTGCATACAAATATTTAAAAAATAATGGAGATATTATGGATAAA AATATTTTACTTATGATACCATTTGATCAAGCTTGCAATTGTAGAAATATTATAGAAGGT ACAATTTTCAAAAAATATGAAAAATTTCCAAATGAATATATTAATAAAAATATGGAAGAA AGTTTATATAATAAATTAAATATCGATTATAAAAATGATAATATAAATGATGAACAATTA AGAAAAGTTATAAGACATCGATATAACAGTTTTACACCTTATAAAAATAGATTATATACT AACGAATATAATGAAAAAAATTTATTTATTTATATTACAGGGCATGGTGGAATACATTTT TTAAAAATTCAAGAATTTAATATTATAAGTTCTTCTGAATTTAATTTATATATTCAAGAA TTACTTATAAAAGATATATATAAAAATATTTTTGTAATAATTGATACATGTCAAGGTTAT AGTTTTTATGATGATATATTAGCATTTATAAATCAAAATAAAATAAAGAATGTTTTTTTA TTGTCATCATCTAATAGAAATGAAAATAGCTATAGCCTTTTTTCAAGTAAGTATTTAAGT GTTTCAACAGTAGACAGATTTACTTATAATTTTTTTGATTATATAGAAAATATCCATAAA ATGAAATCAAAAGAAATATATAAAAATTTGAAATTTTTTTCATTACAAAATATATTGAAT TATTTAAAAACCCAAAATTTAATGTCACATCCCTCAATAAATAATTCAAAATTTAATGTA TCATCATTTTTGCATGATCAAAATGTTATCTTTTACGATTCAAACATGTTGTTTCCAAAA TTTTTTTTTAACAAATTTAATAATAATCAAAATTATCCTAACAACAATCATGATAATAAT AATTCCGAACAAACCTGCTTTGGTTATTTAGGCATATGTGGTCATATAAAAAGTCAAATA TATTTAAACATGGAGAGTTTATATAACGATCGAAGTTATTACAACAATGACGATGTGTAT AATAGTTATGAATTTTATTTTACTGATAAATGTTTTAATTTTAAATATTTTGATATATAT TATATGGCAATATTTTTGATTTTGTTATTTGTTATTTTACTTTTTCTTATAGTATTTATG TTATATTAA
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  • Fasta :-

    MEVKIGIVIYLLIAIKCAIGSIYFSGIDIKNMKSKYEEIKNSNNKQNVNEIFLKELKKYN YINSNAIALSTSRHYFNYRHTANLLIAYKYLKNNGDIMDKNILLMIPFDQACNCRNIIEG TIFKKYEKFPNEYINKNMEESLYNKLNIDYKNDNINDEQLRKVIRHRYNSFTPYKNRLYT NEYNEKNLFIYITGHGGIHFLKIQEFNIISSSEFNLYIQELLIKDIYKNIFVIIDTCQGY SFYDDILAFINQNKIKNVFLLSSSNRNENSYSLFSSKYLSVSTVDRFTYNFFDYIENIHK MKSKEIYKNLKFFSLQNILNYLKTQNLMSHPSINNSKFNVSSFLHDQNVIFYDSNMLFPK FFFNKFNNNQNYPNNNHDNNNSEQTCFGYLGICGHIKSQIYLNMESLYNDRSYYNNDDVY NSYEFYFTDKCFNFKYFDIYYMAIFLILLFVILLFLIVFMLY

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_091950025 SSIYFSGIDI0.991unspPBANKA_091950034 SKNMKSKYEE0.991unsp

PBANKA_091950      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India