PBANKA_0935700 | Josephin domain-containing protein, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_0935700OTHER0.9999700.0000020.000028
No Results

  • Fasta :-

    >PBANKA_0935700 MCYYKIHKIETENGPVNVYFEKQSKLYCLLHTTNNILQAHIYSPQDFREFENNFDYTKLN TNTSDNDNNINENKNNKKFIDLNIKDKLNYEHIFSYLKRGINYFGNFNIDVFYFFVSKHN IELHWVDNKEIFKKLNQNSNCLSLFSDSVLNDQKLIAFVINMVKINFLNIYNHRHFYTIR KISGMWFVLDSSRSKPILLPTSQDMNKHLINIVKDNNFTKHDNYIIQVFKNYEK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_0935700.fa Sequence name : PBANKA_0935700 Sequence length : 234 VALUES OF COMPUTED PARAMETERS Coef20 : 3.054 CoefTot : -0.779 ChDiff : 5 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.688 1.624 -0.089 0.593 MesoH : -0.860 0.190 -0.518 0.172 MuHd_075 : 14.307 9.447 4.405 2.384 MuHd_095 : 12.035 8.621 4.510 2.568 MuHd_100 : 5.250 9.006 2.548 1.548 MuHd_105 : 1.992 12.836 3.905 1.952 Hmax_075 : -3.237 1.925 -2.684 1.278 Hmax_095 : 0.200 5.862 -1.262 2.074 Hmax_100 : 0.200 5.200 -1.949 1.890 Hmax_105 : 6.183 12.717 2.444 4.282 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9886 0.0114 DFMC : 0.9904 0.0096
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 234 PBANKA_0935700 MCYYKIHKIETENGPVNVYFEKQSKLYCLLHTTNNILQAHIYSPQDFREFENNFDYTKLNTNTSDNDNNINENKNNKKFI 80 DLNIKDKLNYEHIFSYLKRGINYFGNFNIDVFYFFVSKHNIELHWVDNKEIFKKLNQNSNCLSLFSDSVLNDQKLIAFVI 160 NMVKINFLNIYNHRHFYTIRKISGMWFVLDSSRSKPILLPTSQDMNKHLINIVKDNNFTKHDNYIIQVFKNYEK 240 ................................................................................ 80 ................................................................................ 160 .......................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_0935700 5 --MCYYK|IH 0.058 . PBANKA_0935700 8 CYYKIHK|IE 0.058 . PBANKA_0935700 22 VNVYFEK|QS 0.058 . PBANKA_0935700 25 YFEKQSK|LY 0.056 . PBANKA_0935700 48 YSPQDFR|EF 0.091 . PBANKA_0935700 58 NNFDYTK|LN 0.055 . PBANKA_0935700 74 NNINENK|NN 0.062 . PBANKA_0935700 77 NENKNNK|KF 0.062 . PBANKA_0935700 78 ENKNNKK|FI 0.139 . PBANKA_0935700 85 FIDLNIK|DK 0.064 . PBANKA_0935700 87 DLNIKDK|LN 0.070 . PBANKA_0935700 98 HIFSYLK|RG 0.053 . PBANKA_0935700 99 IFSYLKR|GI 0.276 . PBANKA_0935700 118 FYFFVSK|HN 0.057 . PBANKA_0935700 129 LHWVDNK|EI 0.074 . PBANKA_0935700 133 DNKEIFK|KL 0.063 . PBANKA_0935700 134 NKEIFKK|LN 0.093 . PBANKA_0935700 154 SVLNDQK|LI 0.064 . PBANKA_0935700 164 FVINMVK|IN 0.057 . PBANKA_0935700 174 LNIYNHR|HF 0.102 . PBANKA_0935700 180 RHFYTIR|KI 0.106 . PBANKA_0935700 181 HFYTIRK|IS 0.081 . PBANKA_0935700 193 FVLDSSR|SK 0.103 . PBANKA_0935700 195 LDSSRSK|PI 0.060 . PBANKA_0935700 207 TSQDMNK|HL 0.075 . PBANKA_0935700 214 HLINIVK|DN 0.075 . PBANKA_0935700 220 KDNNFTK|HD 0.078 . PBANKA_0935700 230 YIIQVFK|NY 0.069 . PBANKA_0935700 234 VFKNYEK|-- 0.060 . ____________________________^_________________

  • Fasta :-

    >PBANKA_0935700 ATGTGTTATTATAAAATACATAAAATTGAAACGGAAAACGGACCAGTAAATGTATACTTT GAAAAACAAAGTAAATTATATTGCTTACTTCATACTACAAATAATATATTGCAAGCACAT ATATATTCTCCTCAAGATTTTCGAGAATTTGAAAACAACTTTGATTACACAAAGCTAAAT ACTAACACATCAGACAATGATAATAATATAAATGAAAACAAAAATAATAAAAAATTTATT GACCTAAATATAAAAGACAAACTGAACTATGAACATATTTTTTCCTATCTTAAAAGAGGA ATTAATTATTTTGGAAATTTTAATATTGATGTTTTTTATTTTTTTGTGAGTAAACATAAT ATTGAATTACATTGGGTTGACAATAAAGAAATATTTAAAAAATTAAATCAAAATAGCAAT TGTCTTTCACTATTTAGTGATAGTGTTTTAAATGATCAAAAATTAATTGCTTTTGTAATA AATATGGTTAAAATAAATTTTTTAAATATTTATAATCATAGACATTTTTATACAATAAGG AAAATTTCAGGCATGTGGTTTGTGTTGGATTCCTCGCGCAGCAAGCCCATTTTGCTGCCT ACTAGTCAGGATATGAACAAACATTTAATTAATATAGTAAAAGATAATAATTTCACTAAG CATGATAATTATATTATACAAGTTTTTAAAAATTATGAGAAATAA
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  • Fasta :-

    MCYYKIHKIETENGPVNVYFEKQSKLYCLLHTTNNILQAHIYSPQDFREFENNFDYTKLN TNTSDNDNNINENKNNKKFIDLNIKDKLNYEHIFSYLKRGINYFGNFNIDVFYFFVSKHN IELHWVDNKEIFKKLNQNSNCLSLFSDSVLNDQKLIAFVINMVKINFLNIYNHRHFYTIR KISGMWFVLDSSRSKPILLPTSQDMNKHLINIVKDNNFTKHDNYIIQVFKNYEK

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PBANKA_093570      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India