PBANKA_1001500 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_1001500OTHER0.9829650.0006150.016420
No Results

  • Fasta :-

    >PBANKA_1001500 MGNALLNHFIFRPHPPSYAKNNKNLHFIKTKHKSIICGFYLNNHADITILFSHGNAEDIG DIVEYYDRYSKYIKVNMFMYDYSGYGHSTGYPNEEHIYNDVEAVYDYMIKSLSIPSEKII AYGRSLGSTASVHIATKKNIKGLILQCPIASIHRVMFRLKHTLPYDLFCNIDKIHTVNCP ILFIHGMKDRVISYHGTMDMLKRVKVNTYYSFIEEADHNDIERFYFKELNSSIVTFIYIL KTNTRYIDNIVNDISKLSIHKLRNKYILNNSDGVKTKLKGIMNEIQKSNHKTKPENKRNN IFYRANLNPSRTSNNENDYNTVKENQESSKDVTKISKENDHYSSVTSISTIFEPEEWKTE GIPNKTFYESDDMNLEDISEYFYNNVSLLHFYKVKRWEKIVNENYNKNSKLQSCKNKING TSQMDICRKYNNYTENSNNNNSNECTKHGNLNQNTNNNNFISRNNTSKSESKIRNNNGKN KIIYSASGNLDINSNSIASKKGAKSGSSSYIYSPKRNINPKRNINPKRNINPKRNINPKS NLKSYNTQGSEKLISNGASDSMSSIKRDELSSREGIASFYNIKSESNISSNMSVTSDKKI IAKKGKQSRNNSHEQGGSNSSGNISGNDASKSDALKCYLSDNVGNNKIEINKLKGKIQVN NNNVSKYYETSNNETNFFDISQENNTSESSK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1001500.fa Sequence name : PBANKA_1001500 Sequence length : 691 VALUES OF COMPUTED PARAMETERS Coef20 : 3.318 CoefTot : -3.001 ChDiff : 28 ZoneTo : 45 KR : 6 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.512 1.176 -0.023 0.526 MesoH : -0.547 0.406 -0.363 0.193 MuHd_075 : 30.524 25.084 8.953 7.624 MuHd_095 : 26.006 15.995 7.143 6.058 MuHd_100 : 20.039 16.423 5.305 6.029 MuHd_105 : 19.877 15.127 8.193 5.178 Hmax_075 : 18.200 17.733 2.870 6.463 Hmax_095 : 1.313 13.400 -2.723 2.900 Hmax_100 : 1.700 13.400 0.625 5.320 Hmax_105 : -3.267 14.000 2.646 4.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2735 0.7265 DFMC : 0.5849 0.4151
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 691 PBANKA_1001500 MGNALLNHFIFRPHPPSYAKNNKNLHFIKTKHKSIICGFYLNNHADITILFSHGNAEDIGDIVEYYDRYSKYIKVNMFMY 80 DYSGYGHSTGYPNEEHIYNDVEAVYDYMIKSLSIPSEKIIAYGRSLGSTASVHIATKKNIKGLILQCPIASIHRVMFRLK 160 HTLPYDLFCNIDKIHTVNCPILFIHGMKDRVISYHGTMDMLKRVKVNTYYSFIEEADHNDIERFYFKELNSSIVTFIYIL 240 KTNTRYIDNIVNDISKLSIHKLRNKYILNNSDGVKTKLKGIMNEIQKSNHKTKPENKRNNIFYRANLNPSRTSNNENDYN 320 TVKENQESSKDVTKISKENDHYSSVTSISTIFEPEEWKTEGIPNKTFYESDDMNLEDISEYFYNNVSLLHFYKVKRWEKI 400 VNENYNKNSKLQSCKNKINGTSQMDICRKYNNYTENSNNNNSNECTKHGNLNQNTNNNNFISRNNTSKSESKIRNNNGKN 480 KIIYSASGNLDINSNSIASKKGAKSGSSSYIYSPKRNINPKRNINPKRNINPKRNINPKSNLKSYNTQGSEKLISNGASD 560 SMSSIKRDELSSREGIASFYNIKSESNISSNMSVTSDKKIIAKKGKQSRNNSHEQGGSNSSGNISGNDASKSDALKCYLS 640 DNVGNNKIEINKLKGKIQVNNNNVSKYYETSNNETNFFDISQENNTSESSK 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1001500 12 LNHFIFR|PH 0.093 . PBANKA_1001500 20 HPPSYAK|NN 0.059 . PBANKA_1001500 23 SYAKNNK|NL 0.071 . PBANKA_1001500 29 KNLHFIK|TK 0.071 . PBANKA_1001500 31 LHFIKTK|HK 0.077 . PBANKA_1001500 33 FIKTKHK|SI 0.090 . PBANKA_1001500 68 IVEYYDR|YS 0.078 . PBANKA_1001500 71 YYDRYSK|YI 0.118 . PBANKA_1001500 74 RYSKYIK|VN 0.064 . PBANKA_1001500 110 VYDYMIK|SL 0.069 . PBANKA_1001500 118 LSIPSEK|II 0.068 . PBANKA_1001500 124 KIIAYGR|SL 0.132 . PBANKA_1001500 137 SVHIATK|KN 0.070 . PBANKA_1001500 138 VHIATKK|NI 0.105 . PBANKA_1001500 141 ATKKNIK|GL 0.064 . PBANKA_1001500 154 PIASIHR|VM 0.080 . PBANKA_1001500 158 IHRVMFR|LK 0.102 . PBANKA_1001500 160 RVMFRLK|HT 0.065 . PBANKA_1001500 173 LFCNIDK|IH 0.057 . PBANKA_1001500 188 LFIHGMK|DR 0.068 . PBANKA_1001500 190 IHGMKDR|VI 0.130 . PBANKA_1001500 202 GTMDMLK|RV 0.063 . PBANKA_1001500 203 TMDMLKR|VK 0.132 . PBANKA_1001500 205 DMLKRVK|VN 0.053 . PBANKA_1001500 223 DHNDIER|FY 0.139 . PBANKA_1001500 227 IERFYFK|EL 0.073 . PBANKA_1001500 241 TFIYILK|TN 0.061 . PBANKA_1001500 245 ILKTNTR|YI 0.123 . PBANKA_1001500 256 IVNDISK|LS 0.066 . PBANKA_1001500 261 SKLSIHK|LR 0.056 . PBANKA_1001500 263 LSIHKLR|NK 0.100 . PBANKA_1001500 265 IHKLRNK|YI 0.064 . PBANKA_1001500 275 NNSDGVK|TK 0.069 . PBANKA_1001500 277 SDGVKTK|LK 0.080 . PBANKA_1001500 279 GVKTKLK|GI 0.077 . PBANKA_1001500 287 IMNEIQK|SN 0.085 . PBANKA_1001500 291 IQKSNHK|TK 0.056 . PBANKA_1001500 293 KSNHKTK|PE 0.088 . PBANKA_1001500 297 KTKPENK|RN 0.058 . PBANKA_1001500 298 TKPENKR|NN 0.176 . PBANKA_1001500 304 RNNIFYR|AN 0.107 . PBANKA_1001500 311 ANLNPSR|TS 0.075 . PBANKA_1001500 323 NDYNTVK|EN 0.062 . PBANKA_1001500 330 ENQESSK|DV 0.108 . PBANKA_1001500 334 SSKDVTK|IS 0.067 . PBANKA_1001500 337 DVTKISK|EN 0.057 . PBANKA_1001500 358 FEPEEWK|TE 0.058 . PBANKA_1001500 365 TEGIPNK|TF 0.074 . PBANKA_1001500 393 SLLHFYK|VK 0.061 . PBANKA_1001500 395 LHFYKVK|RW 0.076 . PBANKA_1001500 396 HFYKVKR|WE 0.171 . PBANKA_1001500 399 KVKRWEK|IV 0.147 . PBANKA_1001500 407 VNENYNK|NS 0.053 . PBANKA_1001500 410 NYNKNSK|LQ 0.059 . PBANKA_1001500 415 SKLQSCK|NK 0.069 . PBANKA_1001500 417 LQSCKNK|IN 0.119 . PBANKA_1001500 428 SQMDICR|KY 0.086 . PBANKA_1001500 429 QMDICRK|YN 0.086 . PBANKA_1001500 447 NSNECTK|HG 0.068 . PBANKA_1001500 463 NNNFISR|NN 0.089 . PBANKA_1001500 468 SRNNTSK|SE 0.134 . PBANKA_1001500 472 TSKSESK|IR 0.063 . PBANKA_1001500 474 KSESKIR|NN 0.106 . PBANKA_1001500 479 IRNNNGK|NK 0.076 . PBANKA_1001500 481 NNNGKNK|II 0.078 . PBANKA_1001500 500 SNSIASK|KG 0.077 . PBANKA_1001500 501 NSIASKK|GA 0.143 . PBANKA_1001500 504 ASKKGAK|SG 0.083 . PBANKA_1001500 515 SYIYSPK|RN 0.062 . PBANKA_1001500 516 YIYSPKR|NI 0.190 . PBANKA_1001500 521 KRNINPK|RN 0.071 . PBANKA_1001500 522 RNINPKR|NI 0.314 . PBANKA_1001500 527 KRNINPK|RN 0.071 . PBANKA_1001500 528 RNINPKR|NI 0.321 . PBANKA_1001500 533 KRNINPK|RN 0.071 . PBANKA_1001500 534 RNINPKR|NI 0.249 . PBANKA_1001500 539 KRNINPK|SN 0.131 . PBANKA_1001500 543 NPKSNLK|SY 0.084 . PBANKA_1001500 552 NTQGSEK|LI 0.071 . PBANKA_1001500 566 DSMSSIK|RD 0.061 . PBANKA_1001500 567 SMSSIKR|DE 0.251 . PBANKA_1001500 573 RDELSSR|EG 0.089 . PBANKA_1001500 583 ASFYNIK|SE 0.075 . PBANKA_1001500 598 MSVTSDK|KI 0.072 . PBANKA_1001500 599 SVTSDKK|II 0.103 . PBANKA_1001500 603 DKKIIAK|KG 0.068 . PBANKA_1001500 604 KKIIAKK|GK 0.103 . PBANKA_1001500 606 IIAKKGK|QS 0.075 . PBANKA_1001500 609 KKGKQSR|NN 0.145 . PBANKA_1001500 631 SGNDASK|SD 0.070 . PBANKA_1001500 636 SKSDALK|CY 0.064 . PBANKA_1001500 647 DNVGNNK|IE 0.060 . PBANKA_1001500 652 NKIEINK|LK 0.068 . PBANKA_1001500 654 IEINKLK|GK 0.081 . PBANKA_1001500 656 INKLKGK|IQ 0.062 . PBANKA_1001500 666 NNNNVSK|YY 0.089 . PBANKA_1001500 691 NTSESSK|-- 0.083 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1001500 ATGGGTAATGCGCTACTAAATCATTTTATCTTTCGCCCACATCCACCGAGTTATGCAAAA AACAATAAAAATTTACATTTTATAAAAACGAAACATAAAAGTATTATATGCGGTTTTTAT TTAAACAATCATGCAGATATAACAATATTGTTTAGTCATGGGAATGCAGAAGATATAGGT GATATTGTAGAATATTATGATAGATATTCTAAGTATATAAAAGTAAATATGTTTATGTAT GACTATAGTGGTTATGGTCATAGTACAGGATATCCTAATGAAGAGCATATATATAATGAT GTAGAAGCAGTATATGATTATATGATTAAATCATTATCTATTCCATCAGAAAAAATAATA GCATATGGTAGAAGTTTAGGCTCTACAGCCTCTGTACACATAGCTACAAAAAAAAATATA AAGGGTTTAATACTTCAATGCCCAATAGCGTCAATACATCGAGTGATGTTTCGATTAAAA CATACATTACCCTATGATTTATTTTGTAATATAGATAAAATACATACTGTTAACTGTCCT ATTTTATTTATACATGGTATGAAAGATAGAGTGATATCATATCATGGAACAATGGACATG CTTAAGAGAGTAAAAGTAAATACATATTATTCGTTTATTGAAGAAGCTGATCATAATGAT ATAGAAAGATTTTATTTTAAGGAATTGAATTCATCTATAGTTACATTTATTTATATTTTA AAAACTAACACACGTTATATTGATAATATTGTAAATGACATCTCAAAACTAAGTATTCAC AAATTAAGAAATAAATATATATTAAATAATAGTGATGGTGTTAAAACGAAATTAAAAGGT ATTATGAACGAAATTCAAAAATCCAATCATAAAACTAAACCTGAAAATAAGCGTAATAAC ATATTTTACCGAGCAAATTTAAACCCGTCCCGGACCTCAAATAACGAAAACGATTATAAT ACAGTTAAAGAAAACCAAGAAAGTAGTAAAGATGTAACTAAAATTAGTAAAGAGAACGAT CATTATTCATCTGTGACAAGTATTAGCACTATATTCGAACCAGAAGAATGGAAAACTGAA GGAATCCCTAATAAAACATTTTATGAAAGTGATGATATGAATCTTGAAGATATTTCAGAG TATTTCTATAATAATGTATCCCTTCTGCATTTTTATAAAGTTAAAAGATGGGAAAAAATT GTTAATGAAAATTATAATAAAAATAGTAAACTGCAATCTTGTAAAAATAAAATCAATGGC ACATCTCAAATGGACATATGCAGAAAATATAATAATTATACAGAAAATTCCAATAATAAC AATTCGAATGAATGTACTAAGCATGGGAATCTAAATCAAAATACAAATAACAATAATTTT ATAAGTAGAAATAACACTAGTAAAAGTGAAAGTAAAATCAGAAACAATAATGGTAAAAAT AAAATAATTTATAGTGCTTCTGGCAACTTAGACATAAATAGCAATAGTATTGCATCGAAA AAAGGGGCGAAAAGTGGAAGTTCCAGTTACATATATAGCCCAAAGAGAAATATAAATCCA AAGAGAAATATAAATCCAAAGAGAAATATAAATCCAAAGAGAAATATAAATCCAAAGAGC AATTTAAAAAGTTATAATACACAAGGTTCAGAAAAATTGATCTCAAATGGTGCAAGTGAT AGTATGAGTTCTATAAAAAGAGATGAATTATCAAGCAGAGAAGGGATAGCAAGTTTTTAT AATATAAAAAGCGAATCAAATATAAGTAGTAATATGTCTGTAACTAGCGATAAGAAAATC ATCGCCAAGAAAGGGAAACAAAGTAGAAATAATAGTCACGAACAAGGTGGTAGCAATTCT AGCGGTAATATTAGTGGAAATGATGCGTCGAAGAGTGATGCCCTTAAATGTTATTTGAGT GATAATGTGGGTAATAATAAAATTGAAATAAATAAATTAAAGGGAAAAATTCAAGTAAAT AATAATAACGTTAGTAAGTATTATGAAACTTCAAATAATGAAACAAATTTTTTTGACATT TCTCAAGAAAATAATACTTCGGAATCTTCAAAATAA
  • Download Fasta

  • Fasta :-

    MGNALLNHFIFRPHPPSYAKNNKNLHFIKTKHKSIICGFYLNNHADITILFSHGNAEDIG DIVEYYDRYSKYIKVNMFMYDYSGYGHSTGYPNEEHIYNDVEAVYDYMIKSLSIPSEKII AYGRSLGSTASVHIATKKNIKGLILQCPIASIHRVMFRLKHTLPYDLFCNIDKIHTVNCP ILFIHGMKDRVISYHGTMDMLKRVKVNTYYSFIEEADHNDIERFYFKELNSSIVTFIYIL KTNTRYIDNIVNDISKLSIHKLRNKYILNNSDGVKTKLKGIMNEIQKSNHKTKPENKRNN IFYRANLNPSRTSNNENDYNTVKENQESSKDVTKISKENDHYSSVTSISTIFEPEEWKTE GIPNKTFYESDDMNLEDISEYFYNNVSLLHFYKVKRWEKIVNENYNKNSKLQSCKNKING TSQMDICRKYNNYTENSNNNNSNECTKHGNLNQNTNNNNFISRNNTSKSESKIRNNNGKN KIIYSASGNLDINSNSIASKKGAKSGSSSYIYSPKRNINPKRNINPKRNINPKRNINPKS NLKSYNTQGSEKLISNGASDSMSSIKRDELSSREGIASFYNIKSESNISSNMSVTSDKKI IAKKGKQSRNNSHEQGGSNSSGNISGNDASKSDALKCYLSDNVGNNKIEINKLKGKIQVN NNNVSKYYETSNNETNFFDISQENNTSESSK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1001500467 SRNNTSKSES0.994unspPBANKA_1001500467 SRNNTSKSES0.994unspPBANKA_1001500467 SRNNTSKSES0.994unspPBANKA_1001500471 SSKSESKIRN0.99unspPBANKA_1001500499 SNSIASKKGA0.994unspPBANKA_1001500505 SKGAKSGSSS0.992unspPBANKA_1001500564 SDSMSSIKRD0.997unspPBANKA_1001500571 SRDELSSREG0.996unspPBANKA_1001500593 SSSNMSVTSD0.99unspPBANKA_1001500612 SSRNNSHEQG0.992unspPBANKA_1001500313 SPSRTSNNEN0.994unspPBANKA_1001500328 SENQESSKDV0.996unsp

PBANKA_100150      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India