PBANKA_1006500 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0020011      

  • Curated_GO_Components:  apicoplast      

  • Curated_GO_Function_IDs:  GO:0003677      

  • Curated_GO_Functions:  DNA binding      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1006500SP0.0264510.9734250.000124CS pos: 23-24. FNS-YK. Pr: 0.4811
No Results

  • Fasta :-

    >PBANKA_1006500 MKLRASTCIVFFLLFFIPCLFNSYKIDSIKIKNIYFSDTLKGTVNKINKQFKNNYDDYDA CKYNKIPKILIDRDKIKNNNKDSGYIVGIENTCDDTCVCIIDLQLRIIKNFIISHFKVVH KYGGVYPFFISSINSVFLKHYVNKMLEGIDASKIKCFGFSVCPGISQNMNTARNYIGDFK KRHKHIKASSINHVYAHVLSPLFFSFYNDENTFTNNYEYKNESTKKDDHKDHINMNLFDT IKKDKIQMDKINSLLKVLNNNDVTKTKLKTITTEDFLNYGSYTLKKKKIDDNNIQLNETK NNINQIKESTNMEKIPLNYIQNGYICLLVSGGSSQVYRVQKDKQNAINVCKMSQTVDISI GDIIDKVARILNLPVGLGGGPFLERESEKYIKTLNGQKNNEDISFDLFEPFPVPFASNNK INFSFSGIFNHLSKIIKELKKEKNFENEKSKYAYYCQKYIFKHLLNQLNKIMYFSELHFN IKNLFIVGGVGCNKFLFESLKILALNRNKIENQLKEYIKLKKRLKKKIKKIENNNFLAKK NLATNNMNDEIELSSSFAWNFYLKNLLKKKTSNDILLALRAFDFNSFTKLKEKGSFLLQD QFLTPSVTQPWNVYRTPINLSRDNAAMICFNTFLNIHNKINIHEDISEIKIKSTIKTQLQ NNFLLLSDIIVFDVFLDHFDHNVA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1006500.fa Sequence name : PBANKA_1006500 Sequence length : 684 VALUES OF COMPUTED PARAMETERS Coef20 : 4.977 CoefTot : 0.218 ChDiff : 33 ZoneTo : 26 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.524 2.488 0.582 0.841 MesoH : -0.317 0.612 -0.293 0.278 MuHd_075 : 19.767 9.540 3.379 4.191 MuHd_095 : 16.119 16.208 6.393 5.103 MuHd_100 : 16.281 14.810 6.090 5.008 MuHd_105 : 17.988 17.020 6.721 4.782 Hmax_075 : 22.283 22.867 4.785 7.175 Hmax_095 : 19.425 23.450 5.201 8.068 Hmax_100 : 19.800 22.800 5.941 7.120 Hmax_105 : 20.767 22.800 4.217 7.193 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6610 0.3390 DFMC : 0.6862 0.3138
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 684 PBANKA_1006500 MKLRASTCIVFFLLFFIPCLFNSYKIDSIKIKNIYFSDTLKGTVNKINKQFKNNYDDYDACKYNKIPKILIDRDKIKNNN 80 KDSGYIVGIENTCDDTCVCIIDLQLRIIKNFIISHFKVVHKYGGVYPFFISSINSVFLKHYVNKMLEGIDASKIKCFGFS 160 VCPGISQNMNTARNYIGDFKKRHKHIKASSINHVYAHVLSPLFFSFYNDENTFTNNYEYKNESTKKDDHKDHINMNLFDT 240 IKKDKIQMDKINSLLKVLNNNDVTKTKLKTITTEDFLNYGSYTLKKKKIDDNNIQLNETKNNINQIKESTNMEKIPLNYI 320 QNGYICLLVSGGSSQVYRVQKDKQNAINVCKMSQTVDISIGDIIDKVARILNLPVGLGGGPFLERESEKYIKTLNGQKNN 400 EDISFDLFEPFPVPFASNNKINFSFSGIFNHLSKIIKELKKEKNFENEKSKYAYYCQKYIFKHLLNQLNKIMYFSELHFN 480 IKNLFIVGGVGCNKFLFESLKILALNRNKIENQLKEYIKLKKRLKKKIKKIENNNFLAKKNLATNNMNDEIELSSSFAWN 560 FYLKNLLKKKTSNDILLALRAFDFNSFTKLKEKGSFLLQDQFLTPSVTQPWNVYRTPINLSRDNAAMICFNTFLNIHNKI 640 NIHEDISEIKIKSTIKTQLQNNFLLLSDIIVFDVFLDHFDHNVA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1006500 2 -----MK|LR 0.054 . PBANKA_1006500 4 ---MKLR|AS 0.102 . PBANKA_1006500 25 CLFNSYK|ID 0.074 . PBANKA_1006500 30 YKIDSIK|IK 0.066 . PBANKA_1006500 32 IDSIKIK|NI 0.080 . PBANKA_1006500 41 YFSDTLK|GT 0.067 . PBANKA_1006500 46 LKGTVNK|IN 0.066 . PBANKA_1006500 49 TVNKINK|QF 0.066 . PBANKA_1006500 52 KINKQFK|NN 0.076 . PBANKA_1006500 62 DDYDACK|YN 0.060 . PBANKA_1006500 65 DACKYNK|IP 0.056 . PBANKA_1006500 68 KYNKIPK|IL 0.069 . PBANKA_1006500 73 PKILIDR|DK 0.086 . PBANKA_1006500 75 ILIDRDK|IK 0.064 . PBANKA_1006500 77 IDRDKIK|NN 0.069 . PBANKA_1006500 81 KIKNNNK|DS 0.084 . PBANKA_1006500 106 IIDLQLR|II 0.081 . PBANKA_1006500 109 LQLRIIK|NF 0.094 . PBANKA_1006500 117 FIISHFK|VV 0.079 . PBANKA_1006500 121 HFKVVHK|YG 0.078 . PBANKA_1006500 139 INSVFLK|HY 0.075 . PBANKA_1006500 144 LKHYVNK|ML 0.102 . PBANKA_1006500 153 EGIDASK|IK 0.058 . PBANKA_1006500 155 IDASKIK|CF 0.078 . PBANKA_1006500 173 QNMNTAR|NY 0.108 . PBANKA_1006500 180 NYIGDFK|KR 0.060 . PBANKA_1006500 181 YIGDFKK|RH 0.090 . PBANKA_1006500 182 IGDFKKR|HK 0.236 . PBANKA_1006500 184 DFKKRHK|HI 0.067 . PBANKA_1006500 187 KRHKHIK|AS 0.109 . PBANKA_1006500 220 TNNYEYK|NE 0.088 . PBANKA_1006500 225 YKNESTK|KD 0.072 . PBANKA_1006500 226 KNESTKK|DD 0.142 . PBANKA_1006500 230 TKKDDHK|DH 0.073 . PBANKA_1006500 242 NLFDTIK|KD 0.059 . PBANKA_1006500 243 LFDTIKK|DK 0.100 . PBANKA_1006500 245 DTIKKDK|IQ 0.071 . PBANKA_1006500 250 DKIQMDK|IN 0.059 . PBANKA_1006500 256 KINSLLK|VL 0.061 . PBANKA_1006500 265 NNNDVTK|TK 0.073 . PBANKA_1006500 267 NDVTKTK|LK 0.063 . PBANKA_1006500 269 VTKTKLK|TI 0.066 . PBANKA_1006500 285 YGSYTLK|KK 0.061 . PBANKA_1006500 286 GSYTLKK|KK 0.100 . PBANKA_1006500 287 SYTLKKK|KI 0.118 . PBANKA_1006500 288 YTLKKKK|ID 0.091 . PBANKA_1006500 300 IQLNETK|NN 0.064 . PBANKA_1006500 307 NNINQIK|ES 0.074 . PBANKA_1006500 314 ESTNMEK|IP 0.059 . PBANKA_1006500 338 GSSQVYR|VQ 0.157 . PBANKA_1006500 341 QVYRVQK|DK 0.185 . PBANKA_1006500 343 YRVQKDK|QN 0.072 . PBANKA_1006500 351 NAINVCK|MS 0.070 . PBANKA_1006500 366 IGDIIDK|VA 0.058 . PBANKA_1006500 369 IIDKVAR|IL 0.081 . PBANKA_1006500 385 GGPFLER|ES 0.105 . PBANKA_1006500 389 LERESEK|YI 0.083 . PBANKA_1006500 392 ESEKYIK|TL 0.067 . PBANKA_1006500 398 KTLNGQK|NN 0.059 . PBANKA_1006500 420 PFASNNK|IN 0.056 . PBANKA_1006500 434 IFNHLSK|II 0.066 . PBANKA_1006500 437 HLSKIIK|EL 0.073 . PBANKA_1006500 440 KIIKELK|KE 0.058 . PBANKA_1006500 441 IIKELKK|EK 0.080 . PBANKA_1006500 443 KELKKEK|NF 0.063 . PBANKA_1006500 449 KNFENEK|SK 0.074 . PBANKA_1006500 451 FENEKSK|YA 0.093 . PBANKA_1006500 458 YAYYCQK|YI 0.081 . PBANKA_1006500 462 CQKYIFK|HL 0.066 . PBANKA_1006500 470 LLNQLNK|IM 0.070 . PBANKA_1006500 482 ELHFNIK|NL 0.074 . PBANKA_1006500 494 GGVGCNK|FL 0.071 . PBANKA_1006500 501 FLFESLK|IL 0.060 . PBANKA_1006500 507 KILALNR|NK 0.070 . PBANKA_1006500 509 LALNRNK|IE 0.057 . PBANKA_1006500 515 KIENQLK|EY 0.061 . PBANKA_1006500 519 QLKEYIK|LK 0.057 . PBANKA_1006500 521 KEYIKLK|KR 0.058 . PBANKA_1006500 522 EYIKLKK|RL 0.094 . PBANKA_1006500 523 YIKLKKR|LK 0.152 . PBANKA_1006500 525 KLKKRLK|KK 0.064 . PBANKA_1006500 526 LKKRLKK|KI 0.486 . PBANKA_1006500 527 KKRLKKK|IK 0.126 . PBANKA_1006500 529 RLKKKIK|KI 0.078 . PBANKA_1006500 530 LKKKIKK|IE 0.089 . PBANKA_1006500 539 NNNFLAK|KN 0.069 . PBANKA_1006500 540 NNFLAKK|NL 0.096 . PBANKA_1006500 564 AWNFYLK|NL 0.064 . PBANKA_1006500 568 YLKNLLK|KK 0.056 . PBANKA_1006500 569 LKNLLKK|KT 0.109 . PBANKA_1006500 570 KNLLKKK|TS 0.111 . PBANKA_1006500 580 DILLALR|AF 0.067 . PBANKA_1006500 589 DFNSFTK|LK 0.067 . PBANKA_1006500 591 NSFTKLK|EK 0.070 . PBANKA_1006500 593 FTKLKEK|GS 0.068 . PBANKA_1006500 615 QPWNVYR|TP 0.082 . PBANKA_1006500 622 TPINLSR|DN 0.117 . PBANKA_1006500 639 FLNIHNK|IN 0.071 . PBANKA_1006500 650 EDISEIK|IK 0.070 . PBANKA_1006500 652 ISEIKIK|ST 0.123 . PBANKA_1006500 656 KIKSTIK|TQ 0.057 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1006500 ATGAAATTAAGAGCATCAACATGTATTGTTTTTTTTTTGTTGTTTTTTATTCCATGTTTA TTCAATTCATACAAAATAGATAGTATAAAAATTAAAAATATATATTTTAGTGACACTTTA AAAGGAACAGTAAATAAAATTAATAAACAATTTAAAAATAACTATGATGATTATGATGCT TGTAAATACAACAAAATTCCAAAAATATTAATAGATAGAGATAAAATTAAAAATAATAAT AAAGATTCAGGATATATTGTTGGAATAGAAAATACTTGTGATGATACATGTGTCTGTATA ATCGATTTGCAACTTCGAATAATCAAAAACTTTATTATATCCCATTTTAAAGTAGTTCAC AAATATGGAGGGGTATACCCCTTTTTTATTAGCTCCATTAATAGTGTGTTTCTAAAGCAT TATGTGAACAAAATGCTCGAAGGAATCGATGCATCAAAAATTAAATGCTTCGGATTCAGT GTGTGTCCTGGTATATCTCAGAACATGAACACAGCTAGAAATTATATAGGAGATTTCAAA AAAAGGCATAAACATATAAAAGCTAGCTCAATAAATCATGTATATGCTCATGTTTTGTCA CCATTGTTTTTCAGCTTTTATAACGACGAAAACACATTTACAAATAACTATGAGTATAAA AATGAAAGCACAAAGAAAGATGACCATAAAGACCATATTAATATGAATCTATTTGATACT ATAAAAAAGGATAAAATACAAATGGATAAAATAAATTCGCTTTTAAAAGTTTTAAATAAT AACGATGTAACAAAAACAAAATTAAAAACGATAACTACAGAAGATTTTTTAAATTATGGC TCATACACTTTAAAAAAAAAAAAAATTGATGATAATAATATTCAATTAAATGAAACAAAA AATAACATAAATCAAATAAAAGAAAGTACTAATATGGAAAAAATACCATTAAATTATATA CAAAATGGATATATTTGTCTTTTAGTTTCTGGTGGAAGTTCACAAGTTTATAGAGTCCAA AAGGATAAACAAAATGCTATTAATGTGTGCAAAATGTCACAAACAGTTGACATATCTATT GGTGATATAATTGATAAAGTTGCTAGGATTCTTAATCTTCCTGTCGGTTTAGGAGGAGGA CCATTTCTTGAACGCGAATCCGAAAAATATATTAAAACATTGAATGGGCAAAAAAATAAT GAAGATATATCATTCGATCTTTTTGAGCCGTTTCCCGTCCCATTCGCTTCTAATAATAAA ATTAATTTTTCATTTTCAGGAATTTTTAACCACCTTAGTAAAATAATAAAAGAGCTAAAA AAAGAAAAAAATTTCGAAAACGAAAAAAGTAAATATGCATATTATTGCCAAAAATATATA TTCAAACATTTGTTAAATCAGCTTAATAAAATTATGTACTTTTCAGAACTGCATTTTAAT ATAAAAAATTTATTCATAGTAGGAGGTGTTGGATGTAATAAATTTTTGTTTGAGAGTTTA AAAATTTTGGCATTAAATAGAAATAAAATAGAAAATCAATTAAAAGAATATATTAAATTA AAAAAACGATTAAAAAAAAAAATAAAAAAAATTGAAAATAATAATTTTTTAGCAAAAAAA AACCTAGCGACAAATAATATGAACGATGAAATTGAATTAAGTTCGTCTTTTGCTTGGAAT TTTTATTTAAAAAATCTTTTAAAAAAAAAAACATCAAATGATATTTTATTAGCCCTAAGG GCATTTGATTTTAACTCCTTTACAAAACTCAAAGAGAAAGGTTCCTTTTTATTACAGGAT CAGTTTCTCACGCCTTCAGTAACACAACCGTGGAATGTGTATAGAACCCCCATAAATCTT AGCCGGGATAATGCGGCAATGATATGCTTTAACACATTTTTAAATATTCACAACAAAATA AACATACACGAAGATATTTCTGAGATTAAAATTAAGTCGACTATAAAAACTCAGCTTCAA AACAATTTCCTTCTTTTATCCGATATAATTGTTTTTGATGTATTTTTAGATCATTTTGAT CATAATGTAGCATAA
  • Download Fasta

  • Fasta :-

    MKLRASTCIVFFLLFFIPCLFNSYKIDSIKIKNIYFSDTLKGTVNKINKQFKNNYDDYDA CKYNKIPKILIDRDKIKNNNKDSGYIVGIENTCDDTCVCIIDLQLRIIKNFIISHFKVVH KYGGVYPFFISSINSVFLKHYVNKMLEGIDASKIKCFGFSVCPGISQNMNTARNYIGDFK KRHKHIKASSINHVYAHVLSPLFFSFYNDENTFTNNYEYKNESTKKDDHKDHINMNLFDT IKKDKIQMDKINSLLKVLNNNDVTKTKLKTITTEDFLNYGSYTLKKKKIDDNNIQLNETK NNINQIKESTNMEKIPLNYIQNGYICLLVSGGSSQVYRVQKDKQNAINVCKMSQTVDISI GDIIDKVARILNLPVGLGGGPFLERESEKYIKTLNGQKNNEDISFDLFEPFPVPFASNNK INFSFSGIFNHLSKIIKELKKEKNFENEKSKYAYYCQKYIFKHLLNQLNKIMYFSELHFN IKNLFIVGGVGCNKFLFESLKILALNRNKIENQLKEYIKLKKRLKKKIKKIENNNFLAKK NLATNNMNDEIELSSSFAWNFYLKNLLKKKTSNDILLALRAFDFNSFTKLKEKGSFLLQD QFLTPSVTQPWNVYRTPINLSRDNAAMICFNTFLNIHNKINIHEDISEIKIKSTIKTQLQ NNFLLLSDIIVFDVFLDHFDHNVA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1006500223 SYKNESTKKD0.996unspPBANKA_1006500387 SLERESEKYI0.996unsp

PBANKA_100650      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India