PBANKA_1010200 | methionine aminopeptidase 2, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1010200OTHER0.9999290.0000000.000071
No Results

  • Fasta :-

    >PBANKA_1010200 MNKRDGKNKHGNQKDKSAKFGGSNISNKATTNEKTVKENEKKQDNLIEEMNIENELIGNE KKDINDSEKNDCTKKENNENKTQDNKNNDDTKKKNTKKGNNNNGCSKSGNGNNQGNEKGG KKSKGKKKGDKLDSILDEFKKEIGEIKIKKCEEKKEEKTEEIKYKIDFDLDEIKKIKKSI IIKEHLVEEQDNKHIRLLKNWPQVENSIQTNPATIPIEMVYKNKNYPVGEILNYNNYVLS GQSLQEKKELEKLSIDYYQDLRKAAECHRQVRKYIQTYIKPGRKMIDIVQKTEQKTKELI LSHKLKCGWGFPTGCSLNNCAAHYTPNYGDETVLKEDDVCKLDFGVHVNGYIIDCAFTVA FNDKYDNLIKATQDGTNTGIKEAGIDARMCDIGEAIQEAIESYEIELNQKVYPIKPISNL RGHSICKYVIHGGKCVPIVKQQEKHEIMEEGDLFAIETFASTGKGFVVHDNDCSHYMRNR DVQYASIRLNSAKTLLKVINDKFDTLPFCNRWLDDLGQTRHFMALKTLIDLNIVEPYPPL CDIKNSFTSQMEHTILLRPTCKEVLSRGPDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1010200.fa Sequence name : PBANKA_1010200 Sequence length : 571 VALUES OF COMPUTED PARAMETERS Coef20 : 2.893 CoefTot : -0.112 ChDiff : 6 ZoneTo : 4 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.712 1.194 0.039 0.536 MesoH : -1.025 -0.009 -0.469 0.145 MuHd_075 : 17.627 6.437 4.116 4.375 MuHd_095 : 14.224 3.208 1.785 2.391 MuHd_100 : 7.962 4.491 1.588 0.454 MuHd_105 : 5.644 6.426 2.597 1.424 Hmax_075 : -18.550 -10.617 -7.396 -0.700 Hmax_095 : -21.787 -14.788 -9.724 -3.054 Hmax_100 : -25.100 -11.700 -8.465 -3.220 Hmax_105 : -23.300 -9.800 -8.297 -3.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9631 0.0369 DFMC : 0.9674 0.0326
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 571 PBANKA_1010200 MNKRDGKNKHGNQKDKSAKFGGSNISNKATTNEKTVKENEKKQDNLIEEMNIENELIGNEKKDINDSEKNDCTKKENNEN 80 KTQDNKNNDDTKKKNTKKGNNNNGCSKSGNGNNQGNEKGGKKSKGKKKGDKLDSILDEFKKEIGEIKIKKCEEKKEEKTE 160 EIKYKIDFDLDEIKKIKKSIIIKEHLVEEQDNKHIRLLKNWPQVENSIQTNPATIPIEMVYKNKNYPVGEILNYNNYVLS 240 GQSLQEKKELEKLSIDYYQDLRKAAECHRQVRKYIQTYIKPGRKMIDIVQKTEQKTKELILSHKLKCGWGFPTGCSLNNC 320 AAHYTPNYGDETVLKEDDVCKLDFGVHVNGYIIDCAFTVAFNDKYDNLIKATQDGTNTGIKEAGIDARMCDIGEAIQEAI 400 ESYEIELNQKVYPIKPISNLRGHSICKYVIHGGKCVPIVKQQEKHEIMEEGDLFAIETFASTGKGFVVHDNDCSHYMRNR 480 DVQYASIRLNSAKTLLKVINDKFDTLPFCNRWLDDLGQTRHFMALKTLIDLNIVEPYPPLCDIKNSFTSQMEHTILLRPT 560 CKEVLSRGPDF 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1010200 3 ----MNK|RD 0.066 . PBANKA_1010200 4 ---MNKR|DG 0.186 . PBANKA_1010200 7 MNKRDGK|NK 0.165 . PBANKA_1010200 9 KRDGKNK|HG 0.081 . PBANKA_1010200 14 NKHGNQK|DK 0.103 . PBANKA_1010200 16 HGNQKDK|SA 0.145 . PBANKA_1010200 19 QKDKSAK|FG 0.086 . PBANKA_1010200 28 GSNISNK|AT 0.080 . PBANKA_1010200 34 KATTNEK|TV 0.067 . PBANKA_1010200 37 TNEKTVK|EN 0.088 . PBANKA_1010200 41 TVKENEK|KQ 0.065 . PBANKA_1010200 42 VKENEKK|QD 0.109 . PBANKA_1010200 61 ELIGNEK|KD 0.054 . PBANKA_1010200 62 LIGNEKK|DI 0.186 . PBANKA_1010200 69 DINDSEK|ND 0.066 . PBANKA_1010200 74 EKNDCTK|KE 0.067 . PBANKA_1010200 75 KNDCTKK|EN 0.092 . PBANKA_1010200 81 KENNENK|TQ 0.075 . PBANKA_1010200 86 NKTQDNK|NN 0.058 . PBANKA_1010200 92 KNNDDTK|KK 0.069 . PBANKA_1010200 93 NNDDTKK|KN 0.111 . PBANKA_1010200 94 NDDTKKK|NT 0.120 . PBANKA_1010200 97 TKKKNTK|KG 0.065 . PBANKA_1010200 98 KKKNTKK|GN 0.124 . PBANKA_1010200 107 NNNGCSK|SG 0.077 . PBANKA_1010200 118 NNQGNEK|GG 0.063 . PBANKA_1010200 121 GNEKGGK|KS 0.062 . PBANKA_1010200 122 NEKGGKK|SK 0.171 . PBANKA_1010200 124 KGGKKSK|GK 0.077 . PBANKA_1010200 126 GKKSKGK|KK 0.115 . PBANKA_1010200 127 KKSKGKK|KG 0.124 . PBANKA_1010200 128 KSKGKKK|GD 0.089 . PBANKA_1010200 131 GKKKGDK|LD 0.064 . PBANKA_1010200 140 SILDEFK|KE 0.058 . PBANKA_1010200 141 ILDEFKK|EI 0.111 . PBANKA_1010200 147 KEIGEIK|IK 0.063 . PBANKA_1010200 149 IGEIKIK|KC 0.064 . PBANKA_1010200 150 GEIKIKK|CE 0.131 . PBANKA_1010200 154 IKKCEEK|KE 0.074 . PBANKA_1010200 155 KKCEEKK|EE 0.094 . PBANKA_1010200 158 EEKKEEK|TE 0.058 . PBANKA_1010200 163 EKTEEIK|YK 0.061 . PBANKA_1010200 165 TEEIKYK|ID 0.082 . PBANKA_1010200 174 FDLDEIK|KI 0.060 . PBANKA_1010200 175 DLDEIKK|IK 0.072 . PBANKA_1010200 177 DEIKKIK|KS 0.067 . PBANKA_1010200 178 EIKKIKK|SI 0.207 . PBANKA_1010200 183 KKSIIIK|EH 0.067 . PBANKA_1010200 193 VEEQDNK|HI 0.060 . PBANKA_1010200 196 QDNKHIR|LL 0.109 . PBANKA_1010200 199 KHIRLLK|NW 0.177 . PBANKA_1010200 222 PIEMVYK|NK 0.058 . PBANKA_1010200 224 EMVYKNK|NY 0.068 . PBANKA_1010200 247 GQSLQEK|KE 0.064 . PBANKA_1010200 248 QSLQEKK|EL 0.092 . PBANKA_1010200 252 EKKELEK|LS 0.059 . PBANKA_1010200 262 DYYQDLR|KA 0.074 . PBANKA_1010200 263 YYQDLRK|AA 0.094 . PBANKA_1010200 269 KAAECHR|QV 0.154 . PBANKA_1010200 272 ECHRQVR|KY 0.253 . PBANKA_1010200 273 CHRQVRK|YI 0.122 . PBANKA_1010200 280 YIQTYIK|PG 0.062 . PBANKA_1010200 283 TYIKPGR|KM 0.099 . PBANKA_1010200 284 YIKPGRK|MI 0.108 . PBANKA_1010200 291 MIDIVQK|TE 0.060 . PBANKA_1010200 295 VQKTEQK|TK 0.062 . PBANKA_1010200 297 KTEQKTK|EL 0.063 . PBANKA_1010200 304 ELILSHK|LK 0.061 . PBANKA_1010200 306 ILSHKLK|CG 0.083 . PBANKA_1010200 335 GDETVLK|ED 0.064 . PBANKA_1010200 341 KEDDVCK|LD 0.064 . PBANKA_1010200 364 TVAFNDK|YD 0.073 . PBANKA_1010200 370 KYDNLIK|AT 0.074 . PBANKA_1010200 381 GTNTGIK|EA 0.077 . PBANKA_1010200 388 EAGIDAR|MC 0.152 . PBANKA_1010200 410 EIELNQK|VY 0.053 . PBANKA_1010200 415 QKVYPIK|PI 0.082 . PBANKA_1010200 421 KPISNLR|GH 0.092 . PBANKA_1010200 427 RGHSICK|YV 0.108 . PBANKA_1010200 434 YVIHGGK|CV 0.074 . PBANKA_1010200 440 KCVPIVK|QQ 0.071 . PBANKA_1010200 444 IVKQQEK|HE 0.070 . PBANKA_1010200 464 TFASTGK|GF 0.064 . PBANKA_1010200 478 DCSHYMR|NR 0.108 . PBANKA_1010200 480 SHYMRNR|DV 0.139 . PBANKA_1010200 488 VQYASIR|LN 0.090 . PBANKA_1010200 493 IRLNSAK|TL 0.084 . PBANKA_1010200 497 SAKTLLK|VI 0.071 . PBANKA_1010200 502 LKVINDK|FD 0.059 . PBANKA_1010200 511 TLPFCNR|WL 0.118 . PBANKA_1010200 520 DDLGQTR|HF 0.083 . PBANKA_1010200 526 RHFMALK|TL 0.062 . PBANKA_1010200 544 PPLCDIK|NS 0.066 . PBANKA_1010200 558 EHTILLR|PT 0.078 . PBANKA_1010200 562 LLRPTCK|EV 0.077 . PBANKA_1010200 567 CKEVLSR|GP 0.093 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1010200 ATGAATAAAAGAGACGGTAAAAATAAGCACGGAAACCAGAAAGATAAAAGTGCCAAATTT GGAGGATCAAATATTTCCAATAAAGCCACAACAAATGAGAAAACTGTAAAAGAAAATGAA AAAAAACAAGATAATCTTATAGAAGAAATGAACATAGAAAATGAGTTGATTGGCAATGAA AAGAAAGATATTAATGATAGTGAAAAAAACGATTGTACAAAAAAAGAAAACAATGAAAAT AAAACTCAAGATAACAAAAATAATGATGATACCAAAAAGAAAAACACCAAAAAAGGAAAC AACAATAATGGGTGTAGTAAAAGCGGAAATGGAAATAATCAAGGCAATGAAAAGGGAGGA AAAAAAAGTAAGGGGAAAAAAAAGGGGGATAAATTGGATTCGATACTCGACGAATTTAAG AAAGAAATTGGAGAAATCAAAATAAAAAAATGTGAAGAAAAAAAAGAAGAAAAGACTGAA GAAATTAAGTACAAAATTGATTTTGATCTAGATGAAATAAAAAAAATAAAAAAAAGTATA ATAATAAAAGAACATTTAGTAGAAGAACAAGATAATAAACATATACGATTATTAAAAAAT TGGCCTCAAGTTGAAAATAGTATACAAACAAATCCAGCAACTATCCCTATTGAAATGGTT TACAAAAATAAAAATTACCCAGTTGGCGAAATATTAAATTATAACAATTATGTATTAAGT GGGCAATCTCTACAAGAAAAAAAAGAATTAGAAAAATTGAGCATTGATTATTATCAAGAT TTAAGAAAAGCTGCTGAATGCCATAGGCAAGTTAGAAAATATATTCAAACATATATTAAA CCTGGAAGAAAAATGATAGATATAGTACAAAAAACAGAACAAAAAACAAAAGAATTAATT TTATCGCATAAATTAAAATGCGGATGGGGATTTCCAACAGGCTGCTCATTAAATAATTGT GCAGCACATTATACTCCCAATTATGGTGATGAAACAGTTCTAAAAGAGGATGATGTATGT AAGTTAGATTTTGGAGTTCATGTAAATGGATATATAATTGATTGTGCATTTACAGTAGCA TTTAATGATAAATATGATAATCTTATTAAAGCTACGCAAGATGGTACAAATACTGGTATT AAAGAAGCAGGTATAGACGCAAGAATGTGTGATATTGGTGAAGCTATACAAGAAGCTATA GAATCATATGAAATTGAATTAAATCAAAAAGTATATCCAATAAAACCTATATCAAATTTA AGAGGGCATTCAATATGTAAATATGTTATACATGGAGGCAAATGTGTGCCTATTGTTAAA CAGCAAGAAAAACATGAAATTATGGAAGAAGGTGATTTATTTGCCATTGAAACATTTGCA TCAACAGGAAAAGGTTTTGTAGTACATGACAATGATTGTTCACATTATATGAGAAATCGG GATGTGCAATATGCGTCTATAAGATTAAATTCAGCAAAAACATTATTAAAAGTTATAAAT GACAAATTTGATACTTTACCATTTTGTAATAGATGGCTAGATGATTTAGGTCAAACCAGA CATTTTATGGCATTAAAAACATTGATAGATTTAAATATTGTAGAACCATATCCCCCTCTT TGTGATATTAAAAATTCCTTTACCTCGCAAATGGAGCACACTATTTTATTGCGGCCCACT TGTAAGGAAGTTTTATCTCGTGGACCAGATTTCTAA
  • Download Fasta

  • Fasta :-

    MNKRDGKNKHGNQKDKSAKFGGSNISNKATTNEKTVKENEKKQDNLIEEMNIENELIGNE KKDINDSEKNDCTKKENNENKTQDNKNNDDTKKKNTKKGNNNNGCSKSGNGNNQGNEKGG KKSKGKKKGDKLDSILDEFKKEIGEIKIKKCEEKKEEKTEEIKYKIDFDLDEIKKIKKSI IIKEHLVEEQDNKHIRLLKNWPQVENSIQTNPATIPIEMVYKNKNYPVGEILNYNNYVLS GQSLQEKKELEKLSIDYYQDLRKAAECHRQVRKYIQTYIKPGRKMIDIVQKTEQKTKELI LSHKLKCGWGFPTGCSLNNCAAHYTPNYGDETVLKEDDVCKLDFGVHVNGYIIDCAFTVA FNDKYDNLIKATQDGTNTGIKEAGIDARMCDIGEAIQEAIESYEIELNQKVYPIKPISNL RGHSICKYVIHGGKCVPIVKQQEKHEIMEEGDLFAIETFASTGKGFVVHDNDCSHYMRNR DVQYASIRLNSAKTLLKVINDKFDTLPFCNRWLDDLGQTRHFMALKTLIDLNIVEPYPPL CDIKNSFTSQMEHTILLRPTCKEVLSRGPDF

  • title: active site
  • coordinates: H323,D343,D354,H423,E457,E552
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_101020067 SDINDSEKND0.994unspPBANKA_1010200549 SNSFTSQMEH0.991unsp

PBANKA_101020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India