PBANKA_1011300 | signal peptidase complex subunit SPC1, putative

No Results

Fasta :-
>PBANKA_1011300 MGFFSCIINMIINTWVCLVRNQMDFQGQKLAFLIKNIIFTISTIVSIAIGYYKQNLALST YIILVGTALSIILIIPTWPIYNRHPIRWGEPSLTKNKKK
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1011300.fa Sequence name : PBANKA_1011300 Sequence length : 99 VALUES OF COMPUTED PARAMETERS Coef20 : 4.825 CoefTot : -2.871 ChDiff : 8 ZoneTo : 96 KR : 7 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.171 2.335 0.474 0.856 MesoH : 0.561 1.145 -0.056 0.454 MuHd_075 : 26.871 19.686 8.130 6.603 MuHd_095 : 37.070 26.315 8.958 9.377 MuHd_100 : 33.511 29.198 10.085 9.219 MuHd_105 : 29.168 25.828 9.844 7.679 Hmax_075 : 9.800 22.600 1.896 6.100 Hmax_095 : 20.038 25.375 -0.554 8.671 Hmax_100 : 13.100 30.500 6.199 8.410 Hmax_105 : 4.300 28.500 4.556 7.201 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5683 0.4317 DFMC : 0.6450 0.3550

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 99 PBANKA_1011300 MGFFSCIINMIINTWVCLVRNQMDFQGQKLAFLIKNIIFTISTIVSIAIGYYKQNLALSTYIILVGTALSIILIIPTWPI 80 YNRHPIRWGEPSLTKNKKK 160 ................................................................................ 80 ................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1011300 20 TWVCLVR|NQ 0.104 . PBANKA_1011300 29 MDFQGQK|LA 0.062 . PBANKA_1011300 35 KLAFLIK|NI 0.071 . PBANKA_1011300 53 IAIGYYK|QN 0.058 . PBANKA_1011300 83 TWPIYNR|HP 0.082 . PBANKA_1011300 87 YNRHPIR|WG 0.128 . PBANKA_1011300 95 GEPSLTK|NK 0.058 . PBANKA_1011300 97 PSLTKNK|KK 0.059 . PBANKA_1011300 98 SLTKNKK|K- 0.110 . PBANKA_1011300 99 LTKNKKK|-- 0.143 . ____________________________^_________________

Fasta :-
>PBANKA_1011300 ATGGGATTTTTTTCATGTATCATAAATATGATTATAAATACTTGGGTGTGTCTAGTGAGA AATCAAATGGATTTCCAAGGTCAAAAGCTAGCATTCTTAATTAAAAATATAATATTTACA ATTTCTACAATCGTTTCAATAGCTATAGGATATTATAAACAAAATTTAGCTTTAAGTACC TACATTATTTTGGTTGGAACAGCCTTATCAATCATACTGATAATCCCAACATGGCCAATA TACAATAGGCATCCAATTAGATGGGGAGAACCATCATTGACAAAAAATAAAAAGAAATAA
Download Fasta