PBANKA_1014500 | plasmepsin IX, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0020008      

  • Curated_GO_Components:  rhoptry      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1014500OTHER0.9275530.0610180.011429
No Results

  • Fasta :-

    >PBANKA_1014500 MFFLTLKKLRKKCFFVFLTHPTITALFFIYIFNFVKSYHVNFNQNPNNLPSLKNNQEYYK QKIQPCNSCVNCFVCIHENGEPQNILPLVAIPSKRHYFYEQDMSKNSNLNGFPVKNKMDN STNYFQKELNKKKKNYNFIENHTAISNIDNDITDEYKESESDLDEENIVKDNFNNLRSSY ENIYNQKKEHSIDSKVILPLQQLQDSQYVGSIQIGNPPQTIRPIFDTGSTNIWVVSTKCK DRTCLKVHRYNHKLSNTFKYYTPRTNLDIMFGTGIIQGTIGIDTFKIGPFKIENQSFGLV KREKGTNKKSNVFKRINFEGIIGLAFSTMLSTGGNPIYENLMSNYNFPHNEFSIYIGMDN KYSALIFGGVEKKFFEGNIYMFPVVREYYWEIKFDGLYIDNQKFCCDNNSIVYDLKMKKK KKNEKKNFIRKYFNKHHINHKKMWLRNNHHTKHWKREKHFNPLSSNENYLIFDSGTSFNS VPKSEIKYFFKVVPPKKCDANNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKHNICKPA FMDIEVSPEYGHAYILGNATFMKHYYTVYRRGKGNNNSYVGIARAAHTKENAEYLNSLHK ERMENEE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1014500.fa Sequence name : PBANKA_1014500 Sequence length : 607 VALUES OF COMPUTED PARAMETERS Coef20 : 4.652 CoefTot : -3.988 ChDiff : 24 ZoneTo : 77 KR : 9 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.171 1.894 0.308 0.750 MesoH : -0.390 0.124 -0.421 0.272 MuHd_075 : 26.394 18.715 9.239 5.425 MuHd_095 : 26.060 19.085 8.830 6.375 MuHd_100 : 27.387 22.782 11.277 6.362 MuHd_105 : 24.834 21.989 11.415 5.801 Hmax_075 : 16.800 16.000 4.284 4.990 Hmax_095 : 7.612 10.237 4.544 4.880 Hmax_100 : 3.900 13.400 2.349 4.880 Hmax_105 : 14.817 17.733 6.236 2.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3675 0.6325 DFMC : 0.4028 0.5972 This protein is probably imported in mitochondria. f(Ser) = 0.0390 f(Arg) = 0.0130 CMi = 0.44183 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 607 PBANKA_1014500 MFFLTLKKLRKKCFFVFLTHPTITALFFIYIFNFVKSYHVNFNQNPNNLPSLKNNQEYYKQKIQPCNSCVNCFVCIHENG 80 EPQNILPLVAIPSKRHYFYEQDMSKNSNLNGFPVKNKMDNSTNYFQKELNKKKKNYNFIENHTAISNIDNDITDEYKESE 160 SDLDEENIVKDNFNNLRSSYENIYNQKKEHSIDSKVILPLQQLQDSQYVGSIQIGNPPQTIRPIFDTGSTNIWVVSTKCK 240 DRTCLKVHRYNHKLSNTFKYYTPRTNLDIMFGTGIIQGTIGIDTFKIGPFKIENQSFGLVKREKGTNKKSNVFKRINFEG 320 IIGLAFSTMLSTGGNPIYENLMSNYNFPHNEFSIYIGMDNKYSALIFGGVEKKFFEGNIYMFPVVREYYWEIKFDGLYID 400 NQKFCCDNNSIVYDLKMKKKKKNEKKNFIRKYFNKHHINHKKMWLRNNHHTKHWKREKHFNPLSSNENYLIFDSGTSFNS 480 VPKSEIKYFFKVVPPKKCDANNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKHNICKPAFMDIEVSPEYGHAYILGNAT 560 FMKHYYTVYRRGKGNNNSYVGIARAAHTKENAEYLNSLHKERMENEE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1014500 7 MFFLTLK|KL 0.057 . PBANKA_1014500 8 FFLTLKK|LR 0.074 . PBANKA_1014500 10 LTLKKLR|KK 0.076 . PBANKA_1014500 11 TLKKLRK|KC 0.094 . PBANKA_1014500 12 LKKLRKK|CF 0.109 . PBANKA_1014500 36 YIFNFVK|SY 0.085 . PBANKA_1014500 53 NNLPSLK|NN 0.061 . PBANKA_1014500 60 NNQEYYK|QK 0.064 . PBANKA_1014500 62 QEYYKQK|IQ 0.060 . PBANKA_1014500 94 LVAIPSK|RH 0.061 . PBANKA_1014500 95 VAIPSKR|HY 0.244 . PBANKA_1014500 105 YEQDMSK|NS 0.057 . PBANKA_1014500 115 LNGFPVK|NK 0.065 . PBANKA_1014500 117 GFPVKNK|MD 0.059 . PBANKA_1014500 127 STNYFQK|EL 0.079 . PBANKA_1014500 131 FQKELNK|KK 0.056 . PBANKA_1014500 132 QKELNKK|KK 0.080 . PBANKA_1014500 133 KELNKKK|KN 0.093 . PBANKA_1014500 134 ELNKKKK|NY 0.182 . PBANKA_1014500 157 DITDEYK|ES 0.062 . PBANKA_1014500 170 DEENIVK|DN 0.069 . PBANKA_1014500 177 DNFNNLR|SS 0.107 . PBANKA_1014500 187 ENIYNQK|KE 0.060 . PBANKA_1014500 188 NIYNQKK|EH 0.084 . PBANKA_1014500 195 EHSIDSK|VI 0.066 . PBANKA_1014500 222 NPPQTIR|PI 0.122 . PBANKA_1014500 238 IWVVSTK|CK 0.065 . PBANKA_1014500 240 VVSTKCK|DR 0.073 . PBANKA_1014500 242 STKCKDR|TC 0.090 . PBANKA_1014500 246 KDRTCLK|VH 0.055 . PBANKA_1014500 249 TCLKVHR|YN 0.114 . PBANKA_1014500 253 VHRYNHK|LS 0.064 . PBANKA_1014500 259 KLSNTFK|YY 0.081 . PBANKA_1014500 264 FKYYTPR|TN 0.104 . PBANKA_1014500 286 IGIDTFK|IG 0.058 . PBANKA_1014500 291 FKIGPFK|IE 0.064 . PBANKA_1014500 301 QSFGLVK|RE 0.057 . PBANKA_1014500 302 SFGLVKR|EK 0.242 . PBANKA_1014500 304 GLVKREK|GT 0.075 . PBANKA_1014500 308 REKGTNK|KS 0.060 . PBANKA_1014500 309 EKGTNKK|SN 0.123 . PBANKA_1014500 314 KKSNVFK|RI 0.088 . PBANKA_1014500 315 KSNVFKR|IN 0.394 . PBANKA_1014500 361 YIGMDNK|YS 0.064 . PBANKA_1014500 372 IFGGVEK|KF 0.066 . PBANKA_1014500 373 FGGVEKK|FF 0.143 . PBANKA_1014500 386 YMFPVVR|EY 0.083 . PBANKA_1014500 393 EYYWEIK|FD 0.070 . PBANKA_1014500 403 LYIDNQK|FC 0.062 . PBANKA_1014500 416 SIVYDLK|MK 0.061 . PBANKA_1014500 418 VYDLKMK|KK 0.059 . PBANKA_1014500 419 YDLKMKK|KK 0.078 . PBANKA_1014500 420 DLKMKKK|KK 0.102 . PBANKA_1014500 421 LKMKKKK|KN 0.173 . PBANKA_1014500 422 KMKKKKK|NE 0.112 . PBANKA_1014500 425 KKKKNEK|KN 0.064 . PBANKA_1014500 426 KKKNEKK|NF 0.121 . PBANKA_1014500 430 EKKNFIR|KY 0.096 . PBANKA_1014500 431 KKNFIRK|YF 0.108 . PBANKA_1014500 435 IRKYFNK|HH 0.082 . PBANKA_1014500 441 KHHINHK|KM 0.062 . PBANKA_1014500 442 HHINHKK|MW 0.138 . PBANKA_1014500 446 HKKMWLR|NN 0.105 . PBANKA_1014500 452 RNNHHTK|HW 0.093 . PBANKA_1014500 455 HHTKHWK|RE 0.060 . PBANKA_1014500 456 HTKHWKR|EK 0.193 . PBANKA_1014500 458 KHWKREK|HF 0.066 . PBANKA_1014500 483 SFNSVPK|SE 0.090 . PBANKA_1014500 487 VPKSEIK|YF 0.075 . PBANKA_1014500 491 EIKYFFK|VV 0.074 . PBANKA_1014500 496 FKVVPPK|KC 0.071 . PBANKA_1014500 497 KVVPPKK|CD 0.089 . PBANKA_1014500 532 PSQYLIR|KH 0.089 . PBANKA_1014500 533 SQYLIRK|HN 0.082 . PBANKA_1014500 538 RKHNICK|PA 0.077 . PBANKA_1014500 563 GNATFMK|HY 0.083 . PBANKA_1014500 570 HYYTVYR|RG 0.078 . PBANKA_1014500 571 YYTVYRR|GK 0.138 . PBANKA_1014500 573 TVYRRGK|GN 0.152 . PBANKA_1014500 584 SYVGIAR|AA 0.163 . PBANKA_1014500 589 ARAAHTK|EN 0.081 . PBANKA_1014500 600 YLNSLHK|ER 0.062 . PBANKA_1014500 602 NSLHKER|ME 0.093 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1014500 ATGTTTTTTTTAACTTTAAAAAAATTAAGAAAAAAATGTTTTTTTGTATTTTTAACACAC CCAACGATAACAGCATTATTTTTTATTTATATTTTTAATTTTGTTAAAAGTTATCATGTA AATTTTAATCAAAATCCAAATAATTTACCTTCTTTAAAAAACAATCAAGAATATTATAAA CAAAAGATACAACCATGTAATTCTTGTGTAAATTGCTTTGTTTGTATTCATGAAAATGGA GAGCCACAGAACATTCTCCCCTTGGTAGCGATACCAAGTAAAAGGCATTATTTTTATGAA CAAGACATGTCAAAAAATAGTAATTTAAATGGTTTTCCAGTTAAAAATAAAATGGATAAT TCTACAAATTATTTTCAAAAGGAATTAAATAAAAAAAAAAAAAATTATAATTTTATTGAA AATCATACTGCAATATCAAATATAGATAATGATATTACGGATGAATATAAAGAATCTGAA AGTGATTTGGATGAAGAAAATATTGTTAAAGACAATTTTAACAATTTAAGATCAAGTTAT GAAAATATATATAATCAAAAAAAGGAACATTCGATAGACAGCAAAGTCATTTTACCTTTA CAACAGCTGCAAGATAGTCAATATGTTGGATCCATTCAAATAGGAAATCCGCCTCAAACG ATCAGACCAATTTTCGATACTGGGAGCACGAATATATGGGTTGTTAGCACTAAATGCAAA GACAGAACATGTTTAAAAGTACATCGATATAATCACAAACTATCCAATACCTTTAAATAC TACACCCCACGAACTAATTTAGATATTATGTTTGGAACCGGAATAATTCAGGGAACTATT GGGATCGATACGTTCAAGATCGGTCCATTTAAAATTGAAAATCAATCCTTTGGATTAGTA AAACGTGAAAAAGGAACTAATAAAAAGTCAAATGTTTTTAAAAGAATAAATTTTGAAGGA ATTATAGGATTAGCATTTTCTACAATGCTTTCTACTGGTGGCAATCCAATATATGAAAAT TTAATGTCTAATTATAATTTTCCACATAATGAATTTTCAATATATATTGGAATGGATAAT AAATATTCAGCTTTAATTTTTGGTGGAGTTGAAAAGAAATTTTTCGAAGGAAATATATAT ATGTTTCCAGTTGTAAGAGAATATTATTGGGAAATAAAATTTGATGGGCTATATATAGAT AATCAAAAATTTTGTTGTGATAATAATTCAATTGTTTACGATTTAAAAATGAAAAAAAAA AAAAAAAATGAAAAAAAAAATTTCATACGAAAATATTTTAATAAACATCATATCAATCAT AAAAAAATGTGGTTGCGAAATAATCATCATACTAAGCATTGGAAAAGAGAAAAACACTTC AATCCATTAAGTTCCAATGAGAATTATTTAATATTTGACTCTGGAACATCCTTTAATAGT GTCCCTAAATCGGAAATAAAATATTTTTTTAAAGTTGTCCCTCCCAAGAAATGCGATGCT AATAACATTGACGAAGTTATAGATAGCTACCCCAACTTAACCTATGTTATCAACAATATG CCCTTTACATTGACACCATCCCAATATTTGATTCGAAAACACAACATCTGTAAACCAGCA TTTATGGATATTGAAGTTTCTCCAGAATATGGGCATGCGTACATTTTAGGAAATGCAACA TTCATGAAACATTATTATACTGTCTACAGACGAGGGAAGGGCAATAATAATTCATATGTT GGAATAGCTAGAGCTGCACATACAAAGGAAAATGCAGAATATTTGAATTCGCTACACAAG GAAAGGATGGAAAATGAAGAATAG
  • Download Fasta

  • Fasta :-

    MFFLTLKKLRKKCFFVFLTHPTITALFFIYIFNFVKSYHVNFNQNPNNLPSLKNNQEYYK QKIQPCNSCVNCFVCIHENGEPQNILPLVAIPSKRHYFYEQDMSKNSNLNGFPVKNKMDN STNYFQKELNKKKKNYNFIENHTAISNIDNDITDEYKESESDLDEENIVKDNFNNLRSSY ENIYNQKKEHSIDSKVILPLQQLQDSQYVGSIQIGNPPQTIRPIFDTGSTNIWVVSTKCK DRTCLKVHRYNHKLSNTFKYYTPRTNLDIMFGTGIIQGTIGIDTFKIGPFKIENQSFGLV KREKGTNKKSNVFKRINFEGIIGLAFSTMLSTGGNPIYENLMSNYNFPHNEFSIYIGMDN KYSALIFGGVEKKFFEGNIYMFPVVREYYWEIKFDGLYIDNQKFCCDNNSIVYDLKMKKK KKNEKKNFIRKYFNKHHINHKKMWLRNNHHTKHWKREKHFNPLSSNENYLIFDSGTSFNS VPKSEIKYFFKVVPPKKCDANNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKHNICKPA FMDIEVSPEYGHAYILGNATFMKHYYTVYRRGKGNNNSYVGIARAAHTKENAEYLNSLHK ERMENEE

  • title: catalytic residue
  • coordinates: D226,D473
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1014500179 SNLRSSYENI0.996unspPBANKA_1014500179 SNLRSSYENI0.996unspPBANKA_1014500179 SNLRSSYENI0.996unspPBANKA_1014500159 SEYKESESDL0.993unspPBANKA_1014500161 SKESESDLDE0.995unsp

PBANKA_101450      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India