PBANKA_1131400 | metacaspase-1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0008233      

  • Curated_GO_Functions:  peptidase activity      

  • Curated_GO_Processes:  apoptotic process      proteolysis      

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1131400OTHER0.9999180.0000410.000041
No Results

  • Fasta :-

    >PBANKA_1131400 MSLQMDKIYVKVHELKFVNNLERNSHYVKIYWDDKKYKSQTKDGGCYIFNETFLIPITNI YDQKDQIIYVEIWESNLLNKQCAYTFFTLNSIKIGQIIKENITFIEVLKKCTLGLSINIV RNQKDILFFNIKELLPTFQDQEIINAVWKNEDEASIIKQLINLNTIDGITNIGNYKNSQN YNETLQKPKENISIYKSGEEIENSYIPSSTPEYVSHYIYKGAGENSSNYINKTKDTLFPT YLNNYAYNNNIKNVYDTPNGAHYSSNNNSGSNNAYSNFDHNINNSPKNNVPFSNSDNDKI FHYSRNYMPSPNSEKMLYFSCGNKKKALLIGIDYCGTQNELKGSINDAIITNELLIKKYN FYDSSMNILKLIDNQTNPNYRPTKRNILSALEWLVQDNNPGDIFFFFYSGHSYKKYDYTC IEKGGYNQTIVPCDFKTEGEIIDNDLHKYLIQPLKDGVKLVSFIDCPNSEGILNLGYKYK LKKEKWKETYNPFHVLADVTQFSYSKINEFPTEINLLEHVLITNNIEALTYHYMIQSIHS YINLYNKKKKKKIFLMSSQKFNIDRKFDFNHILKNSNSELGQQKNIIKWKKNKKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1131400.fa Sequence name : PBANKA_1131400 Sequence length : 595 VALUES OF COMPUTED PARAMETERS Coef20 : 3.598 CoefTot : 0.079 ChDiff : 10 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.694 1.288 0.007 0.490 MesoH : -0.741 0.376 -0.426 0.237 MuHd_075 : 17.613 7.684 4.902 4.173 MuHd_095 : 16.202 3.569 2.396 1.729 MuHd_100 : 16.825 8.626 3.873 1.762 MuHd_105 : 20.723 13.144 6.107 3.283 Hmax_075 : 7.700 12.800 -0.540 4.650 Hmax_095 : 3.237 8.900 -2.223 2.922 Hmax_100 : 5.800 11.200 -0.795 3.640 Hmax_105 : 15.200 14.200 2.082 4.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9387 0.0613 DFMC : 0.9522 0.0478
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 595 PBANKA_1131400 MSLQMDKIYVKVHELKFVNNLERNSHYVKIYWDDKKYKSQTKDGGCYIFNETFLIPITNIYDQKDQIIYVEIWESNLLNK 80 QCAYTFFTLNSIKIGQIIKENITFIEVLKKCTLGLSINIVRNQKDILFFNIKELLPTFQDQEIINAVWKNEDEASIIKQL 160 INLNTIDGITNIGNYKNSQNYNETLQKPKENISIYKSGEEIENSYIPSSTPEYVSHYIYKGAGENSSNYINKTKDTLFPT 240 YLNNYAYNNNIKNVYDTPNGAHYSSNNNSGSNNAYSNFDHNINNSPKNNVPFSNSDNDKIFHYSRNYMPSPNSEKMLYFS 320 CGNKKKALLIGIDYCGTQNELKGSINDAIITNELLIKKYNFYDSSMNILKLIDNQTNPNYRPTKRNILSALEWLVQDNNP 400 GDIFFFFYSGHSYKKYDYTCIEKGGYNQTIVPCDFKTEGEIIDNDLHKYLIQPLKDGVKLVSFIDCPNSEGILNLGYKYK 480 LKKEKWKETYNPFHVLADVTQFSYSKINEFPTEINLLEHVLITNNIEALTYHYMIQSIHSYINLYNKKKKKKIFLMSSQK 560 FNIDRKFDFNHILKNSNSELGQQKNIIKWKKNKKK 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1131400 7 MSLQMDK|IY 0.057 . PBANKA_1131400 11 MDKIYVK|VH 0.057 . PBANKA_1131400 16 VKVHELK|FV 0.093 . PBANKA_1131400 23 FVNNLER|NS 0.083 . PBANKA_1131400 29 RNSHYVK|IY 0.071 . PBANKA_1131400 35 KIYWDDK|KY 0.059 . PBANKA_1131400 36 IYWDDKK|YK 0.126 . PBANKA_1131400 38 WDDKKYK|SQ 0.095 . PBANKA_1131400 42 KYKSQTK|DG 0.081 . PBANKA_1131400 64 TNIYDQK|DQ 0.075 . PBANKA_1131400 80 ESNLLNK|QC 0.070 . PBANKA_1131400 93 FTLNSIK|IG 0.059 . PBANKA_1131400 99 KIGQIIK|EN 0.060 . PBANKA_1131400 109 TFIEVLK|KC 0.061 . PBANKA_1131400 110 FIEVLKK|CT 0.078 . PBANKA_1131400 121 LSINIVR|NQ 0.090 . PBANKA_1131400 124 NIVRNQK|DI 0.100 . PBANKA_1131400 132 ILFFNIK|EL 0.060 . PBANKA_1131400 149 IINAVWK|NE 0.065 . PBANKA_1131400 158 DEASIIK|QL 0.059 . PBANKA_1131400 176 TNIGNYK|NS 0.063 . PBANKA_1131400 187 YNETLQK|PK 0.061 . PBANKA_1131400 189 ETLQKPK|EN 0.065 . PBANKA_1131400 196 ENISIYK|SG 0.105 . PBANKA_1131400 220 VSHYIYK|GA 0.100 . PBANKA_1131400 232 SSNYINK|TK 0.095 . PBANKA_1131400 234 NYINKTK|DT 0.063 . PBANKA_1131400 252 AYNNNIK|NV 0.086 . PBANKA_1131400 287 NINNSPK|NN 0.065 . PBANKA_1131400 299 SNSDNDK|IF 0.084 . PBANKA_1131400 305 KIFHYSR|NY 0.099 . PBANKA_1131400 315 PSPNSEK|ML 0.061 . PBANKA_1131400 324 YFSCGNK|KK 0.054 . PBANKA_1131400 325 FSCGNKK|KA 0.093 . PBANKA_1131400 326 SCGNKKK|AL 0.142 . PBANKA_1131400 342 GTQNELK|GS 0.059 . PBANKA_1131400 357 TNELLIK|KY 0.063 . PBANKA_1131400 358 NELLIKK|YN 0.076 . PBANKA_1131400 370 SSMNILK|LI 0.068 . PBANKA_1131400 381 QTNPNYR|PT 0.095 . PBANKA_1131400 384 PNYRPTK|RN 0.099 . PBANKA_1131400 385 NYRPTKR|NI 0.202 . PBANKA_1131400 414 YSGHSYK|KY 0.067 . PBANKA_1131400 415 SGHSYKK|YD 0.108 . PBANKA_1131400 423 DYTCIEK|GG 0.055 . PBANKA_1131400 436 IVPCDFK|TE 0.062 . PBANKA_1131400 448 IDNDLHK|YL 0.088 . PBANKA_1131400 455 YLIQPLK|DG 0.062 . PBANKA_1131400 459 PLKDGVK|LV 0.064 . PBANKA_1131400 478 ILNLGYK|YK 0.080 . PBANKA_1131400 480 NLGYKYK|LK 0.069 . PBANKA_1131400 482 GYKYKLK|KE 0.063 . PBANKA_1131400 483 YKYKLKK|EK 0.105 . PBANKA_1131400 485 YKLKKEK|WK 0.080 . PBANKA_1131400 487 LKKEKWK|ET 0.077 . PBANKA_1131400 506 TQFSYSK|IN 0.057 . PBANKA_1131400 547 YINLYNK|KK 0.064 . PBANKA_1131400 548 INLYNKK|KK 0.099 . PBANKA_1131400 549 NLYNKKK|KK 0.108 . PBANKA_1131400 550 LYNKKKK|KK 0.113 . PBANKA_1131400 551 YNKKKKK|KI 0.120 . PBANKA_1131400 552 NKKKKKK|IF 0.103 . PBANKA_1131400 560 FLMSSQK|FN 0.068 . PBANKA_1131400 565 QKFNIDR|KF 0.081 . PBANKA_1131400 566 KFNIDRK|FD 0.082 . PBANKA_1131400 574 DFNHILK|NS 0.064 . PBANKA_1131400 584 SELGQQK|NI 0.065 . PBANKA_1131400 588 QQKNIIK|WK 0.062 . PBANKA_1131400 590 KNIIKWK|KN 0.077 . PBANKA_1131400 591 NIIKWKK|NK 0.108 . PBANKA_1131400 593 IKWKKNK|KK 0.073 . PBANKA_1131400 594 KWKKNKK|K- 0.104 . PBANKA_1131400 595 WKKNKKK|-- 0.153 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1131400 ATGTCTTTGCAAATGGACAAAATTTATGTTAAAGTACATGAATTGAAATTTGTAAATAAT TTGGAAAGAAATTCACATTATGTAAAAATATATTGGGATGATAAAAAATATAAAAGTCAG ACAAAAGATGGAGGATGCTATATATTTAACGAAACTTTTTTAATACCAATTACAAATATA TATGATCAAAAAGACCAAATTATTTATGTCGAAATATGGGAAAGTAACTTATTAAATAAA CAATGTGCCTATACATTTTTCACATTAAATAGTATAAAAATAGGACAAATAATAAAAGAA AATATAACTTTTATTGAGGTTTTAAAAAAATGTACCTTAGGATTATCAATTAATATTGTT AGAAATCAAAAAGATATATTATTTTTTAATATTAAAGAATTGTTACCCACATTTCAAGAT CAGGAAATAATAAATGCTGTTTGGAAAAATGAAGATGAAGCATCAATTATAAAACAATTA ATTAATTTAAATACAATTGATGGAATTACAAATATAGGAAATTACAAAAATAGTCAAAAT TATAATGAAACTTTACAGAAACCAAAGGAAAATATTTCCATATATAAAAGTGGCGAAGAA ATTGAAAACAGTTATATTCCAAGTTCGACACCAGAATATGTGAGTCACTATATATATAAA GGCGCAGGCGAAAATAGTTCTAATTATATAAATAAAACAAAGGATACTTTATTTCCTACT TATTTAAATAATTATGCATACAATAATAATATAAAAAACGTTTATGACACACCAAATGGT GCACACTATAGTAGTAATAATAATAGTGGTAGTAATAATGCTTACTCAAATTTTGATCAT AATATTAATAATAGTCCAAAAAATAATGTGCCTTTTTCAAATTCTGATAATGATAAAATT TTCCATTATTCAAGAAATTATATGCCATCTCCAAACTCAGAAAAAATGTTATATTTTTCT TGTGGAAATAAAAAAAAAGCTTTGTTAATTGGAATAGATTATTGTGGTACACAAAATGAG TTAAAGGGGAGTATTAATGATGCAATAATAACAAACGAGCTGTTAATAAAAAAATATAAT TTTTATGATTCATCGATGAATATATTAAAACTAATAGATAATCAAACAAATCCAAATTAT AGACCAACAAAAAGAAATATATTATCAGCATTAGAATGGCTAGTTCAAGATAATAATCCT GGGGATATATTTTTTTTTTTTTATTCAGGCCATAGTTATAAAAAATATGATTATACATGT ATAGAAAAAGGTGGATATAATCAAACAATAGTACCTTGTGATTTTAAAACAGAAGGAGAA ATAATTGATAACGATTTACATAAATATTTAATACAGCCATTAAAAGATGGAGTTAAATTA GTATCATTTATAGATTGTCCTAACTCAGAAGGAATATTAAATTTAGGATATAAATATAAA TTAAAAAAGGAAAAATGGAAAGAAACATATAATCCATTTCATGTTCTTGCCGATGTTACA CAGTTCAGCTATTCAAAAATTAACGAATTTCCAACAGAAATAAATTTGTTAGAACATGTA CTAATTACAAATAATATCGAAGCACTTACTTATCATTATATGATTCAGTCTATCCATTCA TATATAAATTTGTATAATAAAAAAAAAAAAAAAAAAATATTTTTAATGTCTTCACAAAAA TTTAACATAGATAGAAAATTCGATTTTAACCATATTCTTAAAAATTCAAATTCGGAGTTG GGTCAACAAAAAAATATAATAAAATGGAAAAAAAACAAAAAAAAATAA
  • Download Fasta

  • Fasta :-

    MSLQMDKIYVKVHELKFVNNLERNSHYVKIYWDDKKYKSQTKDGGCYIFNETFLIPITNI YDQKDQIIYVEIWESNLLNKQCAYTFFTLNSIKIGQIIKENITFIEVLKKCTLGLSINIV RNQKDILFFNIKELLPTFQDQEIINAVWKNEDEASIIKQLINLNTIDGITNIGNYKNSQN YNETLQKPKENISIYKSGEEIENSYIPSSTPEYVSHYIYKGAGENSSNYINKTKDTLFPT YLNNYAYNNNIKNVYDTPNGAHYSSNNNSGSNNAYSNFDHNINNSPKNNVPFSNSDNDKI FHYSRNYMPSPNSEKMLYFSCGNKKKALLIGIDYCGTQNELKGSINDAIITNELLIKKYN FYDSSMNILKLIDNQTNPNYRPTKRNILSALEWLVQDNNPGDIFFFFYSGHSYKKYDYTC IEKGGYNQTIVPCDFKTEGEIIDNDLHKYLIQPLKDGVKLVSFIDCPNSEGILNLGYKYK LKKEKWKETYNPFHVLADVTQFSYSKINEFPTEINLLEHVLITNNIEALTYHYMIQSIHS YINLYNKKKKKKIFLMSSQKFNIDRKFDFNHILKNSNSELGQQKNIIKWKKNKKK

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1131400313 SPSPNSEKML0.99unspPBANKA_1131400313 SPSPNSEKML0.99unspPBANKA_1131400313 SPSPNSEKML0.99unspPBANKA_1131400412 SYSGHSYKKY0.996unspPBANKA_1131400197 SSIYKSGEEI0.997unspPBANKA_1131400293 SNVPFSNSDN0.994unsp

PBANKA_113140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India