PBANKA_1203900 | peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1203900OTHER0.7410920.2468640.012044
No Results

  • Fasta :-

    >PBANKA_1203900 MVNFNNFINKCIFLFFSNILKTFYGNEKKKLYKEIIDNVKNSKIINFPIDKDSVNFFFIS CEINKLLNIKNKIINDNIQKKKIVENCFNLYYLLATHTKLKKETFCKKIILEYIEENISK NICNNNDQKLDEKNIPYSIRIRNNKSLGNLFNELKEDCSKYLKKINNVKVRYLIIDKNEI KIDEKWKKNHEYTFNKNKLKIPISKYNYEYILNGVEESEIRKKVLELLNRPYKSLNLNSD VINILKKRYDLANKLGYKNWGHYSISQFTMEKNNYENIEKFLNIIKEKIEKDYDKIIYDI LKISNFSKFNNKNNKKNYWENNAHKLAIYDWHYYYNKIMNKSDEYLINTYFPQNIVLKNF MEIISRIYNFFYEEIQNVEIKKKWPKDSIIYKIERYQSNVKRGSTLNNYENKNMSNNVFL GYIYIIPYMDINFNDYFKIPSMNSLPNTCLISPGHVLIDYKFIRTVPIKNKLFSSSEILT LFHEFGHAYHLLLLSNNLSLSNLFNIPLDYAEFFSHINEHLANNYDIIRILSNKIDNNLK ISENLFKTIKFDCSRLSNIYSHSIIDYVVHGINPHLFFSSTINNSENGKDKEEDNLCNFY EMIEKYFPYKFCSFYSIHSTSFPYHFSSYYSGAVLSYLFAEARVLLNNSTNKINLKKNNT LVSFQKQFYDIMLNNFRTENYPSIINNLINSKKSGNFFK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1203900.fa Sequence name : PBANKA_1203900 Sequence length : 699 VALUES OF COMPUTED PARAMETERS Coef20 : 4.444 CoefTot : -1.081 ChDiff : 28 ZoneTo : 26 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.971 1.253 -0.017 0.575 MesoH : -0.209 0.426 -0.351 0.288 MuHd_075 : 19.175 14.961 6.867 4.511 MuHd_095 : 39.724 31.426 13.512 10.135 MuHd_100 : 31.270 23.776 10.466 8.017 MuHd_105 : 20.769 15.472 6.707 5.445 Hmax_075 : 12.513 14.500 2.245 5.340 Hmax_095 : 22.838 25.700 6.000 8.900 Hmax_100 : 21.600 21.200 5.490 7.750 Hmax_105 : 15.300 15.400 2.475 6.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1652 0.8348 DFMC : 0.4359 0.5641 This protein is probably imported in mitochondria. f(Ser) = 0.0385 f(Arg) = 0.0000 CMi = 0.54945 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 699 PBANKA_1203900 MVNFNNFINKCIFLFFSNILKTFYGNEKKKLYKEIIDNVKNSKIINFPIDKDSVNFFFISCEINKLLNIKNKIINDNIQK 80 KKIVENCFNLYYLLATHTKLKKETFCKKIILEYIEENISKNICNNNDQKLDEKNIPYSIRIRNNKSLGNLFNELKEDCSK 160 YLKKINNVKVRYLIIDKNEIKIDEKWKKNHEYTFNKNKLKIPISKYNYEYILNGVEESEIRKKVLELLNRPYKSLNLNSD 240 VINILKKRYDLANKLGYKNWGHYSISQFTMEKNNYENIEKFLNIIKEKIEKDYDKIIYDILKISNFSKFNNKNNKKNYWE 320 NNAHKLAIYDWHYYYNKIMNKSDEYLINTYFPQNIVLKNFMEIISRIYNFFYEEIQNVEIKKKWPKDSIIYKIERYQSNV 400 KRGSTLNNYENKNMSNNVFLGYIYIIPYMDINFNDYFKIPSMNSLPNTCLISPGHVLIDYKFIRTVPIKNKLFSSSEILT 480 LFHEFGHAYHLLLLSNNLSLSNLFNIPLDYAEFFSHINEHLANNYDIIRILSNKIDNNLKISENLFKTIKFDCSRLSNIY 560 SHSIIDYVVHGINPHLFFSSTINNSENGKDKEEDNLCNFYEMIEKYFPYKFCSFYSIHSTSFPYHFSSYYSGAVLSYLFA 640 EARVLLNNSTNKINLKKNNTLVSFQKQFYDIMLNNFRTENYPSIINNLINSKKSGNFFK 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1203900 10 FNNFINK|CI 0.073 . PBANKA_1203900 21 FFSNILK|TF 0.061 . PBANKA_1203900 28 TFYGNEK|KK 0.058 . PBANKA_1203900 29 FYGNEKK|KL 0.094 . PBANKA_1203900 30 YGNEKKK|LY 0.140 . PBANKA_1203900 33 EKKKLYK|EI 0.074 . PBANKA_1203900 40 EIIDNVK|NS 0.057 . PBANKA_1203900 43 DNVKNSK|II 0.059 . PBANKA_1203900 51 INFPIDK|DS 0.061 . PBANKA_1203900 65 ISCEINK|LL 0.063 . PBANKA_1203900 70 NKLLNIK|NK 0.058 . PBANKA_1203900 72 LLNIKNK|II 0.088 . PBANKA_1203900 80 INDNIQK|KK 0.057 . PBANKA_1203900 81 NDNIQKK|KI 0.108 . PBANKA_1203900 82 DNIQKKK|IV 0.178 . PBANKA_1203900 99 LLATHTK|LK 0.060 . PBANKA_1203900 101 ATHTKLK|KE 0.060 . PBANKA_1203900 102 THTKLKK|ET 0.090 . PBANKA_1203900 107 KKETFCK|KI 0.065 . PBANKA_1203900 108 KETFCKK|II 0.092 . PBANKA_1203900 120 IEENISK|NI 0.069 . PBANKA_1203900 129 CNNNDQK|LD 0.070 . PBANKA_1203900 133 DQKLDEK|NI 0.059 . PBANKA_1203900 140 NIPYSIR|IR 0.074 . PBANKA_1203900 142 PYSIRIR|NN 0.085 . PBANKA_1203900 145 IRIRNNK|SL 0.343 . PBANKA_1203900 155 NLFNELK|ED 0.056 . PBANKA_1203900 160 LKEDCSK|YL 0.071 . PBANKA_1203900 163 DCSKYLK|KI 0.062 . PBANKA_1203900 164 CSKYLKK|IN 0.110 . PBANKA_1203900 169 KKINNVK|VR 0.058 . PBANKA_1203900 171 INNVKVR|YL 0.138 . PBANKA_1203900 177 RYLIIDK|NE 0.053 . PBANKA_1203900 181 IDKNEIK|ID 0.065 . PBANKA_1203900 185 EIKIDEK|WK 0.062 . PBANKA_1203900 187 KIDEKWK|KN 0.067 . PBANKA_1203900 188 IDEKWKK|NH 0.103 . PBANKA_1203900 196 HEYTFNK|NK 0.062 . PBANKA_1203900 198 YTFNKNK|LK 0.062 . PBANKA_1203900 200 FNKNKLK|IP 0.065 . PBANKA_1203900 205 LKIPISK|YN 0.071 . PBANKA_1203900 221 VEESEIR|KK 0.066 . PBANKA_1203900 222 EESEIRK|KV 0.092 . PBANKA_1203900 223 ESEIRKK|VL 0.083 . PBANKA_1203900 230 VLELLNR|PY 0.068 . PBANKA_1203900 233 LLNRPYK|SL 0.195 . PBANKA_1203900 246 DVINILK|KR 0.054 . PBANKA_1203900 247 VINILKK|RY 0.090 . PBANKA_1203900 248 INILKKR|YD 0.168 . PBANKA_1203900 254 RYDLANK|LG 0.054 . PBANKA_1203900 258 ANKLGYK|NW 0.064 . PBANKA_1203900 272 SQFTMEK|NN 0.061 . PBANKA_1203900 280 NYENIEK|FL 0.064 . PBANKA_1203900 286 KFLNIIK|EK 0.055 . PBANKA_1203900 288 LNIIKEK|IE 0.067 . PBANKA_1203900 291 IKEKIEK|DY 0.085 . PBANKA_1203900 295 IEKDYDK|II 0.084 . PBANKA_1203900 302 IIYDILK|IS 0.057 . PBANKA_1203900 308 KISNFSK|FN 0.081 . PBANKA_1203900 312 FSKFNNK|NN 0.058 . PBANKA_1203900 315 FNNKNNK|KN 0.072 . PBANKA_1203900 316 NNKNNKK|NY 0.099 . PBANKA_1203900 325 WENNAHK|LA 0.069 . PBANKA_1203900 337 WHYYYNK|IM 0.061 . PBANKA_1203900 341 YNKIMNK|SD 0.085 . PBANKA_1203900 358 PQNIVLK|NF 0.070 . PBANKA_1203900 366 FMEIISR|IY 0.068 . PBANKA_1203900 381 IQNVEIK|KK 0.072 . PBANKA_1203900 382 QNVEIKK|KW 0.082 . PBANKA_1203900 383 NVEIKKK|WP 0.106 . PBANKA_1203900 386 IKKKWPK|DS 0.080 . PBANKA_1203900 392 KDSIIYK|IE 0.067 . PBANKA_1203900 395 IIYKIER|YQ 0.103 . PBANKA_1203900 401 RYQSNVK|RG 0.058 . PBANKA_1203900 402 YQSNVKR|GS 0.226 . PBANKA_1203900 412 LNNYENK|NM 0.071 . PBANKA_1203900 438 NFNDYFK|IP 0.057 . PBANKA_1203900 461 HVLIDYK|FI 0.066 . PBANKA_1203900 464 IDYKFIR|TV 0.131 . PBANKA_1203900 469 IRTVPIK|NK 0.059 . PBANKA_1203900 471 TVPIKNK|LF 0.071 . PBANKA_1203900 529 NNYDIIR|IL 0.093 . PBANKA_1203900 534 IRILSNK|ID 0.062 . PBANKA_1203900 540 KIDNNLK|IS 0.061 . PBANKA_1203900 547 ISENLFK|TI 0.059 . PBANKA_1203900 550 NLFKTIK|FD 0.062 . PBANKA_1203900 555 IKFDCSR|LS 0.079 . PBANKA_1203900 589 NNSENGK|DK 0.076 . PBANKA_1203900 591 SENGKDK|EE 0.066 . PBANKA_1203900 605 FYEMIEK|YF 0.061 . PBANKA_1203900 610 EKYFPYK|FC 0.073 . PBANKA_1203900 643 YLFAEAR|VL 0.072 . PBANKA_1203900 652 LNNSTNK|IN 0.070 . PBANKA_1203900 656 TNKINLK|KN 0.065 . PBANKA_1203900 657 NKINLKK|NN 0.092 . PBANKA_1203900 666 TLVSFQK|QF 0.073 . PBANKA_1203900 677 IMLNNFR|TE 0.059 . PBANKA_1203900 692 NNLINSK|KS 0.061 . PBANKA_1203900 693 NLINSKK|SG 0.109 . PBANKA_1203900 699 KSGNFFK|-- 0.081 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1203900 ATGGTGAATTTTAATAATTTTATAAATAAATGCATTTTCCTATTTTTTTCAAATATTCTC AAAACTTTTTATGGGAATGAAAAAAAAAAATTGTATAAGGAAATTATAGATAATGTCAAA AACTCTAAAATAATTAATTTTCCTATAGACAAAGATTCAGTTAATTTTTTTTTTATTTCA TGTGAAATTAATAAGCTTCTTAATATAAAAAATAAAATAATTAATGATAATATTCAAAAA AAAAAAATCGTAGAAAACTGTTTTAATCTATACTATTTGTTAGCTACACACACAAAATTA AAAAAGGAAACATTTTGTAAAAAAATAATATTGGAATATATTGAAGAAAATATTTCTAAA AATATTTGTAATAATAATGATCAGAAACTTGATGAAAAAAACATTCCATATAGTATACGT ATAAGAAACAATAAATCGTTGGGGAACTTATTTAATGAATTGAAAGAAGATTGCTCAAAA TATTTGAAAAAAATTAACAATGTTAAAGTTAGGTATTTAATAATAGACAAAAACGAAATA AAAATAGACGAAAAATGGAAAAAAAATCATGAATACACTTTTAACAAAAATAAATTGAAA ATCCCGATAAGTAAATATAATTATGAATATATTTTAAATGGGGTAGAAGAGTCTGAGATT CGAAAAAAAGTACTTGAGTTACTTAACAGGCCTTATAAAAGTTTAAATTTAAATAGCGAT GTAATAAATATACTAAAAAAAAGATATGATCTAGCTAATAAATTAGGATATAAAAATTGG GGACATTATTCTATATCACAATTTACAATGGAAAAAAATAATTATGAAAATATAGAAAAG TTTCTTAATATAATTAAAGAAAAAATAGAAAAAGATTACGATAAAATAATATATGATATA TTAAAAATAAGTAATTTTAGCAAATTTAACAATAAAAATAATAAAAAAAATTATTGGGAA AATAATGCACACAAACTAGCCATTTATGATTGGCATTATTATTACAATAAAATTATGAAC AAGTCAGATGAATATTTGATAAATACCTATTTTCCACAAAATATAGTTTTAAAAAATTTT ATGGAAATTATTTCAAGAATATATAATTTTTTTTATGAAGAAATTCAAAATGTGGAAATA AAAAAAAAATGGCCAAAAGATAGTATAATATATAAAATAGAACGGTACCAAAGTAATGTG AAAAGGGGAAGTACATTAAATAATTATGAAAATAAAAATATGTCTAATAATGTATTTTTA GGATATATATATATAATTCCATATATGGACATAAATTTTAATGATTATTTTAAGATTCCT TCAATGAATTCTCTTCCCAATACATGTTTAATAAGCCCAGGGCATGTATTAATAGATTAT AAATTTATTAGAACGGTACCTATTAAAAATAAATTATTTAGTTCTTCTGAAATATTAACA TTATTTCATGAATTTGGGCATGCATATCATTTATTATTATTATCAAATAATTTGAGTTTA TCAAATTTATTTAACATTCCCTTAGATTATGCTGAATTTTTTTCGCATATAAATGAGCAT TTAGCTAATAATTATGATATAATTCGTATATTGTCAAATAAAATTGATAATAATTTAAAA ATAAGTGAAAATTTATTTAAAACAATTAAATTTGATTGCTCAAGACTTTCTAATATATAT TCACATTCTATTATAGATTATGTTGTACATGGCATTAATCCACATTTGTTTTTTTCAAGC ACAATTAATAATTCTGAAAACGGGAAAGATAAAGAAGAAGATAACCTATGTAATTTTTAT GAAATGATTGAAAAATATTTTCCTTATAAATTTTGTTCATTTTATTCAATACATTCTACT AGTTTTCCATATCATTTTTCAAGTTATTATTCTGGGGCTGTTTTAAGTTATTTATTTGCA GAAGCACGCGTCCTTTTAAATAATTCAACTAATAAAATTAACTTAAAAAAAAATAACACA TTAGTATCTTTTCAGAAACAATTTTATGATATAATGCTTAACAATTTTAGAACAGAAAAT TATCCTTCCATTATAAATAATTTAATAAATTCGAAGAAAAGTGGAAATTTTTTTAAATAG
  • Download Fasta

  • Fasta :-

    MVNFNNFINKCIFLFFSNILKTFYGNEKKKLYKEIIDNVKNSKIINFPIDKDSVNFFFIS CEINKLLNIKNKIINDNIQKKKIVENCFNLYYLLATHTKLKKETFCKKIILEYIEENISK NICNNNDQKLDEKNIPYSIRIRNNKSLGNLFNELKEDCSKYLKKINNVKVRYLIIDKNEI KIDEKWKKNHEYTFNKNKLKIPISKYNYEYILNGVEESEIRKKVLELLNRPYKSLNLNSD VINILKKRYDLANKLGYKNWGHYSISQFTMEKNNYENIEKFLNIIKEKIEKDYDKIIYDI LKISNFSKFNNKNNKKNYWENNAHKLAIYDWHYYYNKIMNKSDEYLINTYFPQNIVLKNF MEIISRIYNFFYEEIQNVEIKKKWPKDSIIYKIERYQSNVKRGSTLNNYENKNMSNNVFL GYIYIIPYMDINFNDYFKIPSMNSLPNTCLISPGHVLIDYKFIRTVPIKNKLFSSSEILT LFHEFGHAYHLLLLSNNLSLSNLFNIPLDYAEFFSHINEHLANNYDIIRILSNKIDNNLK ISENLFKTIKFDCSRLSNIYSHSIIDYVVHGINPHLFFSSTINNSENGKDKEEDNLCNFY EMIEKYFPYKFCSFYSIHSTSFPYHFSSYYSGAVLSYLFAEARVLLNNSTNKINLKKNNT LVSFQKQFYDIMLNNFRTENYPSIINNLINSKKSGNFFK

  • title: Zn binding site
  • coordinates: H483,H487,E512
No Results
No Results
No Results

PBANKA_120390      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India