PBANKA_1205100 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_1205100OTHER0.9999510.0000410.000008
No Results

  • Fasta :-

    >PBANKA_1205100 MDSITLGNNDVETSRTNKSSTIPSPDVNSNMVYLNIYDLDNVSKVINSVAKPIGTGAFHA GVEVYGYEYSFGYVSNGKTGVMKSNPRYHPHHVYRESISMGKTPLTKTEVDLLVDAMKLQ WIGDTYDILSRNCLNYADYFCNLLDVGGVPDWLMSLQKNLIWVKSNINVASSKLKELNKA SGLPNVLNYVKKKCIKKDEKHQKCKVVLK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1205100.fa Sequence name : PBANKA_1205100 Sequence length : 209 VALUES OF COMPUTED PARAMETERS Coef20 : 3.869 CoefTot : 0.000 ChDiff : 6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.465 0.953 -0.083 0.462 MesoH : -0.733 0.170 -0.456 0.176 MuHd_075 : 6.837 11.227 3.833 2.192 MuHd_095 : 10.271 7.747 2.936 1.392 MuHd_100 : 3.632 7.489 2.088 1.048 MuHd_105 : 20.237 10.343 5.697 3.765 Hmax_075 : -8.750 1.400 -4.264 0.744 Hmax_095 : -6.737 -1.600 -4.131 -0.359 Hmax_100 : -7.800 -0.700 -3.685 0.220 Hmax_105 : -2.900 2.000 -2.677 1.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7975 0.2025 DFMC : 0.8767 0.1233
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 209 PBANKA_1205100 MDSITLGNNDVETSRTNKSSTIPSPDVNSNMVYLNIYDLDNVSKVINSVAKPIGTGAFHAGVEVYGYEYSFGYVSNGKTG 80 VMKSNPRYHPHHVYRESISMGKTPLTKTEVDLLVDAMKLQWIGDTYDILSRNCLNYADYFCNLLDVGGVPDWLMSLQKNL 160 IWVKSNINVASSKLKELNKASGLPNVLNYVKKKCIKKDEKHQKCKVVLK 240 ................................................................................ 80 ................................................................................ 160 ................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1205100 15 NDVETSR|TN 0.070 . PBANKA_1205100 18 ETSRTNK|SS 0.206 . PBANKA_1205100 44 DLDNVSK|VI 0.062 . PBANKA_1205100 51 VINSVAK|PI 0.110 . PBANKA_1205100 78 GYVSNGK|TG 0.052 . PBANKA_1205100 83 GKTGVMK|SN 0.089 . PBANKA_1205100 87 VMKSNPR|YH 0.077 . PBANKA_1205100 95 HPHHVYR|ES 0.166 . PBANKA_1205100 102 ESISMGK|TP 0.056 . PBANKA_1205100 107 GKTPLTK|TE 0.057 . PBANKA_1205100 118 LLVDAMK|LQ 0.064 . PBANKA_1205100 131 TYDILSR|NC 0.069 . PBANKA_1205100 158 WLMSLQK|NL 0.066 . PBANKA_1205100 164 KNLIWVK|SN 0.074 . PBANKA_1205100 173 INVASSK|LK 0.062 . PBANKA_1205100 175 VASSKLK|EL 0.074 . PBANKA_1205100 179 KLKELNK|AS 0.060 . PBANKA_1205100 191 NVLNYVK|KK 0.055 . PBANKA_1205100 192 VLNYVKK|KC 0.120 . PBANKA_1205100 193 LNYVKKK|CI 0.186 . PBANKA_1205100 196 VKKKCIK|KD 0.073 . PBANKA_1205100 197 KKKCIKK|DE 0.116 . PBANKA_1205100 200 CIKKDEK|HQ 0.057 . PBANKA_1205100 203 KDEKHQK|CK 0.066 . PBANKA_1205100 205 EKHQKCK|VV 0.090 . PBANKA_1205100 209 KCKVVLK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1205100 ATGGATTCTATAACTTTGGGCAATAATGATGTAGAAACCTCTCGAACTAACAAATCTTCT ACAATACCTTCACCTGATGTTAATTCAAACATGGTTTATTTAAATATATACGATTTAGAT AATGTTTCAAAAGTTATAAACTCCGTTGCAAAACCTATTGGAACAGGCGCTTTTCATGCT GGGGTTGAAGTTTACGGCTACGAGTATTCTTTCGGTTATGTATCGAATGGTAAAACCGGA GTAATGAAATCGAATCCAAGATATCATCCACATCATGTTTATCGTGAAAGTATTTCTATG GGTAAAACACCATTAACAAAAACTGAAGTTGATCTCCTTGTTGATGCTATGAAACTCCAA TGGATTGGAGATACATATGATATATTATCAAGAAATTGTTTAAACTATGCTGATTATTTT TGTAATTTACTAGATGTTGGAGGGGTACCTGACTGGTTAATGAGTTTACAAAAAAATTTA ATTTGGGTAAAATCAAATATTAATGTTGCATCTAGTAAATTGAAGGAATTAAATAAGGCT TCTGGATTGCCAAATGTTTTAAATTATGTTAAGAAAAAGTGCATCAAAAAAGATGAAAAA CACCAAAAATGTAAAGTTGTTTTAAAATAA
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  • Fasta :-

    MDSITLGNNDVETSRTNKSSTIPSPDVNSNMVYLNIYDLDNVSKVINSVAKPIGTGAFHA GVEVYGYEYSFGYVSNGKTGVMKSNPRYHPHHVYRESISMGKTPLTKTEVDLLVDAMKLQ WIGDTYDILSRNCLNYADYFCNLLDVGGVPDWLMSLQKNLIWVKSNINVASSKLKELNKA SGLPNVLNYVKKKCIKKDEKHQKCKVVLK

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PBANKA_120510      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India