PBANKA_1213700 | methionine aminopeptidase 1b, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1213700OTHER0.9999950.0000010.000004
No Results

  • Fasta :-

    >PBANKA_1213700 MSDNTKQSNSSSNQNDNNISKGYDAKKEKVLENKKCSNNSDFSKCDNTYKDSISLKREDK SIEMEKPRDNNLVCKGCGENLTKKLSCPVCLKNKINSYFCNQECFKRSWKEHSKMHKSEN ENNEKNANKESKQIEKNNCTEITIKELFPQNYDPSNRKYWIYDNHLSNFINYDFTGNLRP WPISKMNYVPDHIEKPDYAITSIPASELKYKRKSDIYVNNSDEIERIKEACILGRKTLDY AHSLVCPGITTDEIDKKVHDFIIKNNAYPSPLNYYEFPKSCCTSVNEIVCHGIPDYRPLK NGDIINIDISVYYKGVHADLNETYFVGGNISNEAKQLVETCYFSLMEAIQKCKPGMLYKN LGNIIDAYVSKKNFSVIRTYSGHGVGKLFHSNPTIPHFRKNKAVGIMKPGHVFTIEPMIN QGHYADVLWPDKWTCATADGKLSAQFEHTLLVTQTGVEILTKRFPDSPSLGFDTKDELYI M
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1213700.fa Sequence name : PBANKA_1213700 Sequence length : 481 VALUES OF COMPUTED PARAMETERS Coef20 : 3.524 CoefTot : 0.112 ChDiff : 5 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.553 0.882 -0.059 0.471 MesoH : -0.717 0.034 -0.463 0.169 MuHd_075 : 13.447 8.668 3.649 1.745 MuHd_095 : 15.495 8.880 4.835 2.829 MuHd_100 : 21.757 10.341 5.919 3.200 MuHd_105 : 25.217 8.935 5.803 2.914 Hmax_075 : -9.100 -9.100 -6.030 -2.333 Hmax_095 : -13.000 -10.900 -6.464 -2.230 Hmax_100 : -3.200 -8.200 -4.280 -1.510 Hmax_105 : -3.200 -8.200 -4.280 -1.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9197 0.0803 DFMC : 0.8520 0.1480
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 481 PBANKA_1213700 MSDNTKQSNSSSNQNDNNISKGYDAKKEKVLENKKCSNNSDFSKCDNTYKDSISLKREDKSIEMEKPRDNNLVCKGCGEN 80 LTKKLSCPVCLKNKINSYFCNQECFKRSWKEHSKMHKSENENNEKNANKESKQIEKNNCTEITIKELFPQNYDPSNRKYW 160 IYDNHLSNFINYDFTGNLRPWPISKMNYVPDHIEKPDYAITSIPASELKYKRKSDIYVNNSDEIERIKEACILGRKTLDY 240 AHSLVCPGITTDEIDKKVHDFIIKNNAYPSPLNYYEFPKSCCTSVNEIVCHGIPDYRPLKNGDIINIDISVYYKGVHADL 320 NETYFVGGNISNEAKQLVETCYFSLMEAIQKCKPGMLYKNLGNIIDAYVSKKNFSVIRTYSGHGVGKLFHSNPTIPHFRK 400 NKAVGIMKPGHVFTIEPMINQGHYADVLWPDKWTCATADGKLSAQFEHTLLVTQTGVEILTKRFPDSPSLGFDTKDELYI 480 M 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 . 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1213700 6 -MSDNTK|QS 0.066 . PBANKA_1213700 21 NDNNISK|GY 0.076 . PBANKA_1213700 26 SKGYDAK|KE 0.067 . PBANKA_1213700 27 KGYDAKK|EK 0.077 . PBANKA_1213700 29 YDAKKEK|VL 0.071 . PBANKA_1213700 34 EKVLENK|KC 0.061 . PBANKA_1213700 35 KVLENKK|CS 0.073 . PBANKA_1213700 44 NNSDFSK|CD 0.078 . PBANKA_1213700 50 KCDNTYK|DS 0.065 . PBANKA_1213700 56 KDSISLK|RE 0.081 . PBANKA_1213700 57 DSISLKR|ED 0.166 . PBANKA_1213700 60 SLKREDK|SI 0.259 . PBANKA_1213700 66 KSIEMEK|PR 0.065 . PBANKA_1213700 68 IEMEKPR|DN 0.116 . PBANKA_1213700 75 DNNLVCK|GC 0.090 . PBANKA_1213700 83 CGENLTK|KL 0.059 . PBANKA_1213700 84 GENLTKK|LS 0.090 . PBANKA_1213700 92 SCPVCLK|NK 0.056 . PBANKA_1213700 94 PVCLKNK|IN 0.064 . PBANKA_1213700 106 CNQECFK|RS 0.061 . PBANKA_1213700 107 NQECFKR|SW 0.288 . PBANKA_1213700 110 CFKRSWK|EH 0.144 . PBANKA_1213700 114 SWKEHSK|MH 0.062 . PBANKA_1213700 117 EHSKMHK|SE 0.086 . PBANKA_1213700 125 ENENNEK|NA 0.067 . PBANKA_1213700 129 NEKNANK|ES 0.074 . PBANKA_1213700 132 NANKESK|QI 0.108 . PBANKA_1213700 136 ESKQIEK|NN 0.067 . PBANKA_1213700 145 CTEITIK|EL 0.064 . PBANKA_1213700 157 NYDPSNR|KY 0.086 . PBANKA_1213700 158 YDPSNRK|YW 0.077 . PBANKA_1213700 179 DFTGNLR|PW 0.070 . PBANKA_1213700 185 RPWPISK|MN 0.066 . PBANKA_1213700 195 VPDHIEK|PD 0.064 . PBANKA_1213700 209 IPASELK|YK 0.072 . PBANKA_1213700 211 ASELKYK|RK 0.077 . PBANKA_1213700 212 SELKYKR|KS 0.176 . PBANKA_1213700 213 ELKYKRK|SD 0.139 . PBANKA_1213700 226 NSDEIER|IK 0.085 . PBANKA_1213700 228 DEIERIK|EA 0.065 . PBANKA_1213700 235 EACILGR|KT 0.101 . PBANKA_1213700 236 ACILGRK|TL 0.067 . PBANKA_1213700 256 TTDEIDK|KV 0.067 . PBANKA_1213700 257 TDEIDKK|VH 0.102 . PBANKA_1213700 264 VHDFIIK|NN 0.053 . PBANKA_1213700 279 NYYEFPK|SC 0.091 . PBANKA_1213700 297 HGIPDYR|PL 0.080 . PBANKA_1213700 300 PDYRPLK|NG 0.104 . PBANKA_1213700 314 DISVYYK|GV 0.109 . PBANKA_1213700 335 NISNEAK|QL 0.067 . PBANKA_1213700 351 LMEAIQK|CK 0.057 . PBANKA_1213700 353 EAIQKCK|PG 0.059 . PBANKA_1213700 359 KPGMLYK|NL 0.087 . PBANKA_1213700 371 IDAYVSK|KN 0.078 . PBANKA_1213700 372 DAYVSKK|NF 0.126 . PBANKA_1213700 378 KNFSVIR|TY 0.120 . PBANKA_1213700 387 SGHGVGK|LF 0.071 . PBANKA_1213700 399 PTIPHFR|KN 0.105 . PBANKA_1213700 400 TIPHFRK|NK 0.092 . PBANKA_1213700 402 PHFRKNK|AV 0.305 . PBANKA_1213700 408 KAVGIMK|PG 0.059 . PBANKA_1213700 432 DVLWPDK|WT 0.059 . PBANKA_1213700 441 CATADGK|LS 0.065 . PBANKA_1213700 462 GVEILTK|RF 0.058 . PBANKA_1213700 463 VEILTKR|FP 0.128 . PBANKA_1213700 475 SLGFDTK|DE 0.068 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1213700 ATGTCTGACAACACAAAGCAGAGCAATAGTAGTAGCAATCAGAACGACAACAATATTAGC AAAGGATATGATGCAAAAAAGGAGAAAGTATTAGAAAATAAAAAATGTAGCAACAATAGC GATTTTTCAAAATGTGACAATACTTATAAAGATTCTATATCACTTAAAAGAGAAGATAAA AGTATAGAAATGGAAAAACCACGCGATAATAATTTAGTATGTAAAGGATGTGGCGAAAAT CTAACGAAAAAATTGAGTTGCCCTGTATGTTTAAAGAACAAAATAAATAGCTATTTTTGT AATCAAGAGTGTTTTAAACGCTCTTGGAAAGAACATTCTAAAATGCATAAAAGTGAAAAT GAGAATAATGAAAAGAATGCAAATAAGGAATCAAAACAAATTGAAAAAAACAATTGTACA GAAATAACAATAAAAGAATTATTTCCACAAAATTATGACCCTAGTAATAGAAAATATTGG ATTTATGATAATCATTTAAGCAATTTTATAAATTATGATTTTACTGGAAACCTAAGACCA TGGCCTATATCAAAAATGAATTATGTACCTGACCATATTGAAAAGCCAGATTATGCCATT ACTTCAATACCTGCATCAGAATTGAAATATAAAAGAAAAAGTGATATATATGTAAATAAT AGTGACGAAATTGAAAGAATAAAAGAAGCATGTATATTAGGTAGGAAAACTTTAGACTAT GCGCATTCATTAGTTTGTCCAGGAATAACAACTGATGAAATTGATAAAAAAGTTCATGAT TTTATAATTAAAAATAATGCATATCCATCTCCATTAAATTATTATGAATTTCCAAAATCA TGTTGTACATCTGTAAACGAAATAGTATGTCATGGTATACCAGATTATAGACCATTAAAA AATGGAGATATTATAAATATAGATATAAGTGTATATTACAAAGGTGTACATGCAGATTTA AATGAAACTTATTTTGTTGGAGGAAACATATCAAATGAAGCTAAACAACTTGTAGAAACT TGTTATTTTTCATTAATGGAAGCAATTCAAAAATGTAAACCTGGTATGTTATATAAAAAT CTTGGAAATATTATAGATGCTTATGTATCGAAAAAAAACTTTTCAGTCATTCGTACTTAT TCAGGGCATGGGGTAGGAAAATTATTTCATTCAAATCCAACTATACCTCATTTTAGAAAA AATAAAGCTGTAGGAATAATGAAACCAGGTCATGTATTTACAATTGAACCTATGATTAAT CAAGGCCATTATGCAGATGTGTTATGGCCAGATAAATGGACATGTGCAACTGCTGATGGA AAATTATCAGCACAATTTGAACACACTTTGTTAGTTACTCAAACTGGAGTTGAAATATTG ACAAAAAGATTCCCTGATTCCCCAAGCCTTGGATTTGATACAAAGGATGAGCTATACATT ATGTGA
  • Download Fasta

  • Fasta :-

    MSDNTKQSNSSSNQNDNNISKGYDAKKEKVLENKKCSNNSDFSKCDNTYKDSISLKREDK SIEMEKPRDNNLVCKGCGENLTKKLSCPVCLKNKINSYFCNQECFKRSWKEHSKMHKSEN ENNEKNANKESKQIEKNNCTEITIKELFPQNYDPSNRKYWIYDNHLSNFINYDFTGNLRP WPISKMNYVPDHIEKPDYAITSIPASELKYKRKSDIYVNNSDEIERIKEACILGRKTLDY AHSLVCPGITTDEIDKKVHDFIIKNNAYPSPLNYYEFPKSCCTSVNEIVCHGIPDYRPLK NGDIINIDISVYYKGVHADLNETYFVGGNISNEAKQLVETCYFSLMEAIQKCKPGMLYKN LGNIIDAYVSKKNFSVIRTYSGHGVGKLFHSNPTIPHFRKNKAVGIMKPGHVFTIEPMIN QGHYADVLWPDKWTCATADGKLSAQFEHTLLVTQTGVEILTKRFPDSPSLGFDTKDELYI M

  • title: active site
  • coordinates: H291,D308,D319,H383,E416,E447
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_121370061 SREDKSIEME0.996unspPBANKA_121370061 SREDKSIEME0.996unspPBANKA_121370061 SREDKSIEME0.996unspPBANKA_1213700108 SCFKRSWKEH0.997unspPBANKA_1213700375 SKKNFSVIRT0.992unspPBANKA_121370043 SNSDFSKCDN0.994unspPBANKA_121370054 SKDSISLKRE0.995unsp

PBANKA_121370      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India