PBANKA_1220200 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1220200OTHER0.9988750.0005580.000568
No Results

  • Fasta :-

    >PBANKA_1220200 MDISQEERQLASHMLNSGNKNPSIMGDPDVSFFTNKYGLRIKTLKWLVKAPIGAVVLVHS LNSHCRFDYLKHNATILNNNKAVLNDEDNYYVHKNSWIEELNKNGYSVYGLDLQGHGESE SLNNIKTHINKFDDFADDILQYLNIIHDSIVNEFDKSQENDKDGDTNKIKPRKRCTKCDI ILNDESGMCCVDDEEAITKGLRSQDPGKNQYKRPDYNIDAYKTPIPIYLVGLSMGGNIVL RILELMSQQKYNFYNRLNIKGVCSLSGMISINQLKKKPSWKYFYIPTVGLASYLFPKSRF MPSLPCESFPFLNDLYSYDKIFYHKPITNKFAYELLEAADNLNKDIIKITGDVSILFIHS INDQKCCYKDAQDFYNNLKSSNKEFYSLEDMEHMITIEPGNDRVVKKIIDWISNIEKESK GEKKTKKKAKKKLRSTIEKQAAPNQSCTSTDPSASIDYSKDKATQGEAKLDQDAQDQIIL DEGIEYDGTLNKGVEDDGTLNKGVEDDGTLDEGIEDDGTLDEGIEDDGTLYEGIEYNGTL NKGVEDDGTLDEGVEDDGTLDEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTL DEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTL DEGIEYNGTLNKGVEDDGTLDEGIEDDGALNKAQLGEVA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1220200.fa Sequence name : PBANKA_1220200 Sequence length : 699 VALUES OF COMPUTED PARAMETERS Coef20 : 3.459 CoefTot : 0.000 ChDiff : -62 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.412 1.629 0.203 0.666 MesoH : -0.421 0.243 -0.375 0.209 MuHd_075 : 23.122 11.984 4.813 3.844 MuHd_095 : 18.170 20.502 7.884 6.418 MuHd_100 : 25.078 20.419 8.751 6.176 MuHd_105 : 25.180 16.613 7.476 4.866 Hmax_075 : 4.900 5.133 -2.462 2.205 Hmax_095 : 6.500 11.900 0.338 4.600 Hmax_100 : 4.300 7.300 -0.404 3.320 Hmax_105 : 3.900 6.900 -0.683 2.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9597 0.0403 DFMC : 0.9607 0.0393
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 699 PBANKA_1220200 MDISQEERQLASHMLNSGNKNPSIMGDPDVSFFTNKYGLRIKTLKWLVKAPIGAVVLVHSLNSHCRFDYLKHNATILNNN 80 KAVLNDEDNYYVHKNSWIEELNKNGYSVYGLDLQGHGESESLNNIKTHINKFDDFADDILQYLNIIHDSIVNEFDKSQEN 160 DKDGDTNKIKPRKRCTKCDIILNDESGMCCVDDEEAITKGLRSQDPGKNQYKRPDYNIDAYKTPIPIYLVGLSMGGNIVL 240 RILELMSQQKYNFYNRLNIKGVCSLSGMISINQLKKKPSWKYFYIPTVGLASYLFPKSRFMPSLPCESFPFLNDLYSYDK 320 IFYHKPITNKFAYELLEAADNLNKDIIKITGDVSILFIHSINDQKCCYKDAQDFYNNLKSSNKEFYSLEDMEHMITIEPG 400 NDRVVKKIIDWISNIEKESKGEKKTKKKAKKKLRSTIEKQAAPNQSCTSTDPSASIDYSKDKATQGEAKLDQDAQDQIIL 480 DEGIEYDGTLNKGVEDDGTLNKGVEDDGTLDEGIEDDGTLDEGIEDDGTLYEGIEYNGTLNKGVEDDGTLDEGVEDDGTL 560 DEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTL 640 DEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTLDEGIEDDGALNKAQLGEVA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1220200 8 DISQEER|QL 0.089 . PBANKA_1220200 20 MLNSGNK|NP 0.066 . PBANKA_1220200 36 VSFFTNK|YG 0.062 . PBANKA_1220200 40 TNKYGLR|IK 0.072 . PBANKA_1220200 42 KYGLRIK|TL 0.059 . PBANKA_1220200 45 LRIKTLK|WL 0.073 . PBANKA_1220200 49 TLKWLVK|AP 0.069 . PBANKA_1220200 66 SLNSHCR|FD 0.114 . PBANKA_1220200 71 CRFDYLK|HN 0.072 . PBANKA_1220200 81 TILNNNK|AV 0.071 . PBANKA_1220200 94 DNYYVHK|NS 0.069 . PBANKA_1220200 103 WIEELNK|NG 0.056 . PBANKA_1220200 126 ESLNNIK|TH 0.064 . PBANKA_1220200 131 IKTHINK|FD 0.069 . PBANKA_1220200 156 IVNEFDK|SQ 0.081 . PBANKA_1220200 162 KSQENDK|DG 0.072 . PBANKA_1220200 168 KDGDTNK|IK 0.065 . PBANKA_1220200 170 GDTNKIK|PR 0.061 . PBANKA_1220200 172 TNKIKPR|KR 0.111 . PBANKA_1220200 173 NKIKPRK|RC 0.081 . PBANKA_1220200 174 KIKPRKR|CT 0.154 . PBANKA_1220200 177 PRKRCTK|CD 0.139 . PBANKA_1220200 199 DEEAITK|GL 0.069 . PBANKA_1220200 202 AITKGLR|SQ 0.119 . PBANKA_1220200 208 RSQDPGK|NQ 0.064 . PBANKA_1220200 212 PGKNQYK|RP 0.063 . PBANKA_1220200 213 GKNQYKR|PD 0.227 . PBANKA_1220200 222 YNIDAYK|TP 0.062 . PBANKA_1220200 241 GGNIVLR|IL 0.095 . PBANKA_1220200 250 ELMSQQK|YN 0.068 . PBANKA_1220200 256 KYNFYNR|LN 0.105 . PBANKA_1220200 260 YNRLNIK|GV 0.080 . PBANKA_1220200 275 ISINQLK|KK 0.056 . PBANKA_1220200 276 SINQLKK|KP 0.119 . PBANKA_1220200 277 INQLKKK|PS 0.149 . PBANKA_1220200 281 KKKPSWK|YF 0.074 . PBANKA_1220200 297 ASYLFPK|SR 0.067 . PBANKA_1220200 299 YLFPKSR|FM 0.086 . PBANKA_1220200 320 DLYSYDK|IF 0.058 . PBANKA_1220200 325 DKIFYHK|PI 0.069 . PBANKA_1220200 330 HKPITNK|FA 0.080 . PBANKA_1220200 344 AADNLNK|DI 0.073 . PBANKA_1220200 348 LNKDIIK|IT 0.074 . PBANKA_1220200 365 HSINDQK|CC 0.061 . PBANKA_1220200 369 DQKCCYK|DA 0.079 . PBANKA_1220200 379 DFYNNLK|SS 0.075 . PBANKA_1220200 383 NLKSSNK|EF 0.066 . PBANKA_1220200 403 IEPGNDR|VV 0.120 . PBANKA_1220200 406 GNDRVVK|KI 0.190 . PBANKA_1220200 407 NDRVVKK|II 0.189 . PBANKA_1220200 417 WISNIEK|ES 0.067 . PBANKA_1220200 420 NIEKESK|GE 0.058 . PBANKA_1220200 423 KESKGEK|KT 0.066 . PBANKA_1220200 424 ESKGEKK|TK 0.104 . PBANKA_1220200 426 KGEKKTK|KK 0.070 . PBANKA_1220200 427 GEKKTKK|KA 0.183 . PBANKA_1220200 428 EKKTKKK|AK 0.132 . PBANKA_1220200 430 KTKKKAK|KK 0.075 . PBANKA_1220200 431 TKKKAKK|KL 0.117 . PBANKA_1220200 432 KKKAKKK|LR 0.172 . PBANKA_1220200 434 KAKKKLR|ST 0.232 . PBANKA_1220200 439 LRSTIEK|QA 0.097 . PBANKA_1220200 460 ASIDYSK|DK 0.079 . PBANKA_1220200 462 IDYSKDK|AT 0.071 . PBANKA_1220200 469 ATQGEAK|LD 0.077 . PBANKA_1220200 492 YDGTLNK|GV 0.085 . PBANKA_1220200 502 DDGTLNK|GV 0.083 . PBANKA_1220200 542 YNGTLNK|GV 0.088 . PBANKA_1220200 572 YNGTLNK|GV 0.088 . PBANKA_1220200 592 YNGTLNK|GV 0.088 . PBANKA_1220200 612 YNGTLNK|GV 0.088 . PBANKA_1220200 632 YNGTLNK|GV 0.088 . PBANKA_1220200 652 YNGTLNK|GV 0.088 . PBANKA_1220200 672 YNGTLNK|GV 0.088 . PBANKA_1220200 692 DDGALNK|AQ 0.058 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1220200 ATGGATATATCTCAAGAAGAAAGACAATTAGCAAGTCATATGTTAAATTCGGGTAATAAA AACCCGTCAATAATGGGTGACCCTGATGTTAGTTTTTTTACAAATAAATATGGTTTACGG ATAAAAACATTAAAATGGCTTGTCAAAGCACCGATAGGTGCAGTAGTTTTAGTGCACTCT TTAAATTCACATTGTCGATTTGATTATTTAAAACACAATGCCACCATATTAAATAATAAT AAAGCTGTTTTAAATGATGAAGACAATTATTATGTCCATAAAAATAGCTGGATAGAAGAA TTAAACAAAAATGGATATTCGGTTTATGGTCTTGATTTGCAAGGTCATGGGGAATCAGAA TCTTTAAATAATATAAAAACACACATTAATAAATTTGATGATTTTGCTGATGACATTCTT CAGTACTTGAATATTATACATGATTCTATTGTTAATGAATTTGATAAGAGTCAAGAAAAT GATAAAGATGGTGATACAAATAAAATAAAACCAAGAAAAAGATGCACTAAATGTGATATA ATTCTAAACGATGAATCGGGCATGTGTTGTGTTGATGATGAAGAAGCTATAACTAAAGGA TTACGTTCACAAGATCCAGGAAAAAATCAATATAAAAGACCTGATTATAATATAGATGCA TATAAAACACCTATTCCTATATATTTAGTTGGATTATCAATGGGAGGAAATATAGTTTTG AGAATATTAGAATTGATGTCACAACAAAAATATAATTTTTATAATCGATTAAATATAAAA GGTGTTTGCTCATTATCCGGAATGATATCAATTAATCAGCTAAAAAAAAAACCTTCATGG AAATATTTTTACATACCTACTGTTGGGTTAGCATCCTATTTATTTCCGAAATCGAGATTT ATGCCAAGTTTACCTTGTGAATCATTTCCATTTTTAAACGATTTATATTCATATGATAAA ATATTTTATCACAAACCTATTACTAATAAATTTGCTTATGAATTATTGGAAGCTGCTGAT AATTTAAATAAGGATATAATCAAGATCACAGGTGACGTGTCCATACTTTTTATTCACTCT ATTAATGATCAAAAATGTTGTTACAAAGATGCTCAGGATTTTTATAATAATTTAAAATCG AGCAATAAAGAATTCTACTCTTTAGAAGATATGGAGCATATGATTACAATAGAGCCAGGA AATGATAGAGTTGTCAAAAAAATTATAGATTGGATATCAAATATAGAAAAAGAATCAAAG GGGGAAAAAAAAACTAAAAAAAAAGCTAAAAAAAAACTCAGATCTACTATTGAGAAGCAA GCTGCCCCAAATCAATCTTGTACATCGACAGACCCAAGTGCTTCAATCGATTACTCAAAG GACAAAGCCACACAAGGTGAAGCTAAACTAGATCAAGACGCACAAGACCAAATTATACTA GACGAAGGTATAGAATATGATGGTACATTAAACAAAGGTGTAGAAGATGATGGTACATTA AACAAAGGTGTAGAAGATGATGGTACGTTAGACGAAGGTATAGAAGATGATGGTACATTA GACGAAGGTATAGAAGATGATGGTACATTATACGAAGGTATAGAATATAACGGCACATTA AACAAAGGTGTAGAAGATGATGGTACATTAGACGAAGGTGTAGAAGATGATGGTACATTA GACGAAGGTATAGAATATAACGGCACATTAAACAAAGGTGTAGAAGATGATGGTACATTA GACGAAGGTATAGAATATAACGGCACATTAAACAAAGGTGTAGAAGATGATGGTACATTA GACGAAGGTATAGAATATAACGGCACATTAAACAAAGGTGTAGAAGATGATGGTACATTA GACGAAGGTATAGAATATAACGGCACATTAAACAAAGGTGTAGAAGATGATGGTACATTA GACGAAGGTATAGAATATAACGGCACATTAAACAAAGGTGTAGAAGATGATGGTACATTA GACGAAGGTATAGAATATAACGGCACATTAAACAAAGGTGTAGAAGATGATGGTACATTA GACGAAGGTATAGAAGATGATGGTGCATTAAACAAAGCTCAATTAGGCGAAGTTGCATAA
  • Download Fasta

  • Fasta :-

    MDISQEERQLASHMLNSGNKNPSIMGDPDVSFFTNKYGLRIKTLKWLVKAPIGAVVLVHS LNSHCRFDYLKHNATILNNNKAVLNDEDNYYVHKNSWIEELNKNGYSVYGLDLQGHGESE SLNNIKTHINKFDDFADDILQYLNIIHDSIVNEFDKSQENDKDGDTNKIKPRKRCTKCDI ILNDESGMCCVDDEEAITKGLRSQDPGKNQYKRPDYNIDAYKTPIPIYLVGLSMGGNIVL RILELMSQQKYNFYNRLNIKGVCSLSGMISINQLKKKPSWKYFYIPTVGLASYLFPKSRF MPSLPCESFPFLNDLYSYDKIFYHKPITNKFAYELLEAADNLNKDIIKITGDVSILFIHS INDQKCCYKDAQDFYNNLKSSNKEFYSLEDMEHMITIEPGNDRVVKKIIDWISNIEKESK GEKKTKKKAKKKLRSTIEKQAAPNQSCTSTDPSASIDYSKDKATQGEAKLDQDAQDQIIL DEGIEYDGTLNKGVEDDGTLNKGVEDDGTLDEGIEDDGTLDEGIEDDGTLYEGIEYNGTL NKGVEDDGTLDEGVEDDGTLDEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTL DEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTLDEGIEYNGTLNKGVEDDGTL DEGIEYNGTLNKGVEDDGTLDEGIEDDGALNKAQLGEVA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1220200157 SEFDKSQEND0.992unspPBANKA_1220200387 SKEFYSLEDM0.991unsp

PBANKA_122020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India