PBANKA_1222500 | plasmepsin X, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1222500SP0.0983510.9015670.000083CS pos: 25-26. IKC-NK. Pr: 0.8169
No Results

  • Fasta :-

    >PBANKA_1222500 MKSIKILPVFYLVTFFLHNYNEIKCNKVYISGDNFMPCSECKDINKCGGCLFDNNEFLPS AIELKLTKKNRDNNNHDNLKIHHDSLKLGNVKYYVKRGEGVSGSFGNASGNDINSMAKIH NEIKNRTENKEENKSSLSFIDHINNNLGEGKGGYNFSRIQKHEQDGDKINAQEEFEKIKS QVVDKSVVSFSDRVLDENEGQTQPSKGVTVEETSDNVFLVPLQHLRDSQFVGKLLVGTPP QEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGSITG TLGKDNFILGNHIIRNQTFGLVKSETSDNLNNADNVFEYINFEGIVGLGFPGMLTAGNIP FFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYYEGDIYMLPVVKEYYWEVKLDA IYIGDEKICCEEESYAIFDSGTSYNTMPSTQISNFFKIVSSKPCNEENYNNILKEYPTIK YVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTVFVRGQE GNPSMVGVAKAKQV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1222500.fa Sequence name : PBANKA_1222500 Sequence length : 554 VALUES OF COMPUTED PARAMETERS Coef20 : 4.061 CoefTot : -0.822 ChDiff : -11 ZoneTo : 21 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.612 1.582 0.167 0.652 MesoH : -0.273 0.290 -0.362 0.283 MuHd_075 : 14.557 10.970 5.453 3.264 MuHd_095 : 9.271 9.374 2.882 1.805 MuHd_100 : 15.165 13.103 5.093 2.807 MuHd_105 : 25.026 18.432 8.628 4.705 Hmax_075 : 16.917 20.300 3.361 7.187 Hmax_095 : 15.800 15.600 2.234 6.380 Hmax_100 : 16.800 21.000 3.504 7.360 Hmax_105 : 19.250 21.000 3.787 6.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8826 0.1174 DFMC : 0.8671 0.1329
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 554 PBANKA_1222500 MKSIKILPVFYLVTFFLHNYNEIKCNKVYISGDNFMPCSECKDINKCGGCLFDNNEFLPSAIELKLTKKNRDNNNHDNLK 80 IHHDSLKLGNVKYYVKRGEGVSGSFGNASGNDINSMAKIHNEIKNRTENKEENKSSLSFIDHINNNLGEGKGGYNFSRIQ 160 KHEQDGDKINAQEEFEKIKSQVVDKSVVSFSDRVLDENEGQTQPSKGVTVEETSDNVFLVPLQHLRDSQFVGKLLVGTPP 240 QEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGSITGTLGKDNFILGNHIIRNQTFG 320 LVKSETSDNLNNADNVFEYINFEGIVGLGFPGMLTAGNIPFFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYYE 400 GDIYMLPVVKEYYWEVKLDAIYIGDEKICCEEESYAIFDSGTSYNTMPSTQISNFFKIVSSKPCNEENYNNILKEYPTIK 480 YVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTVFVRGQEGNPSMVGVAKAKQV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1222500 2 -----MK|SI 0.083 . PBANKA_1222500 5 --MKSIK|IL 0.060 . PBANKA_1222500 24 HNYNEIK|CN 0.067 . PBANKA_1222500 27 NEIKCNK|VY 0.060 . PBANKA_1222500 42 MPCSECK|DI 0.098 . PBANKA_1222500 46 ECKDINK|CG 0.062 . PBANKA_1222500 65 PSAIELK|LT 0.064 . PBANKA_1222500 68 IELKLTK|KN 0.060 . PBANKA_1222500 69 ELKLTKK|NR 0.082 . PBANKA_1222500 71 KLTKKNR|DN 0.123 . PBANKA_1222500 80 NNHDNLK|IH 0.070 . PBANKA_1222500 87 IHHDSLK|LG 0.062 . PBANKA_1222500 92 LKLGNVK|YY 0.062 . PBANKA_1222500 96 NVKYYVK|RG 0.058 . PBANKA_1222500 97 VKYYVKR|GE 0.250 . PBANKA_1222500 118 DINSMAK|IH 0.062 . PBANKA_1222500 124 KIHNEIK|NR 0.059 . PBANKA_1222500 126 HNEIKNR|TE 0.103 . PBANKA_1222500 130 KNRTENK|EE 0.067 . PBANKA_1222500 134 ENKEENK|SS 0.075 . PBANKA_1222500 151 NNLGEGK|GG 0.059 . PBANKA_1222500 158 GGYNFSR|IQ 0.103 . PBANKA_1222500 161 NFSRIQK|HE 0.149 . PBANKA_1222500 168 HEQDGDK|IN 0.069 . PBANKA_1222500 177 AQEEFEK|IK 0.075 . PBANKA_1222500 179 EEFEKIK|SQ 0.069 . PBANKA_1222500 185 KSQVVDK|SV 0.104 . PBANKA_1222500 193 VVSFSDR|VL 0.135 . PBANKA_1222500 206 GQTQPSK|GV 0.086 . PBANKA_1222500 226 VPLQHLR|DS 0.095 . PBANKA_1222500 233 DSQFVGK|LL 0.068 . PBANKA_1222500 262 VVTTECK|ED 0.057 . PBANKA_1222500 267 CKEDSCK|KV 0.090 . PBANKA_1222500 268 KEDSCKK|VH 0.071 . PBANKA_1222500 276 HQYNPNK|SK 0.073 . PBANKA_1222500 278 YNPNKSK|TF 0.066 . PBANKA_1222500 281 NKSKTFR|RS 0.137 . PBANKA_1222500 282 KSKTFRR|SF 0.435 . PBANKA_1222500 286 FRRSFIK|QN 0.076 . PBANKA_1222500 304 ITGTLGK|DN 0.076 . PBANKA_1222500 315 LGNHIIR|NQ 0.088 . PBANKA_1222500 323 QTFGLVK|SE 0.062 . PBANKA_1222500 367 FFDNLLK|QY 0.063 . PBANKA_1222500 370 NLLKQYK|NM 0.065 . PBANKA_1222500 396 IVGGISK|SY 0.076 . PBANKA_1222500 410 YMLPVVK|EY 0.058 . PBANKA_1222500 417 EYYWEVK|LD 0.061 . PBANKA_1222500 427 IYIGDEK|IC 0.057 . PBANKA_1222500 457 QISNFFK|IV 0.116 . PBANKA_1222500 462 FKIVSSK|PC 0.065 . PBANKA_1222500 474 NYNNILK|EY 0.062 . PBANKA_1222500 480 KEYPTIK|YV 0.103 . PBANKA_1222500 485 IKYVFGK|LV 0.106 . PBANKA_1222500 529 GTIAFMR|HY 0.108 . PBANKA_1222500 537 YFTVFVR|GQ 0.101 . PBANKA_1222500 550 SMVGVAK|AK 0.075 . PBANKA_1222500 552 VGVAKAK|QV 0.090 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1222500 ATGAAGAGCATAAAAATATTACCCGTATTTTATTTGGTGACATTTTTTTTGCACAACTAT AATGAGATAAAATGTAACAAAGTATACATATCTGGAGATAATTTTATGCCTTGTTCAGAA TGTAAAGATATAAATAAGTGTGGTGGTTGTTTGTTTGATAACAATGAGTTTTTACCTAGT GCAATAGAATTAAAATTGACGAAAAAAAACAGGGATAACAATAATCATGATAATTTAAAA ATTCACCATGATTCATTAAAATTAGGAAATGTAAAATATTATGTAAAAAGAGGAGAAGGT GTTTCAGGAAGTTTTGGGAATGCTTCAGGAAATGACATAAACAGTATGGCTAAGATTCAT AATGAAATAAAAAATCGAACAGAAAATAAGGAAGAAAATAAATCGTCTTTAAGTTTCATT GATCATATTAATAATAATCTGGGAGAAGGAAAAGGAGGTTATAATTTTTCAAGAATACAA AAACATGAACAGGATGGAGATAAAATAAATGCACAAGAAGAATTTGAGAAAATAAAAAGT CAAGTTGTTGATAAATCTGTAGTTTCATTCTCTGATCGTGTTTTAGATGAAAATGAAGGT CAAACTCAGCCTTCCAAAGGTGTGACTGTTGAAGAAACAAGTGATAATGTGTTTTTAGTT CCTTTACAACATTTAAGAGATAGTCAGTTTGTTGGTAAGTTATTAGTAGGTACACCTCCT CAAGAAATTCATCCAATATTCGATACAGGAAGTACAAATTTATGGGTAGTTACAACTGAA TGTAAAGAAGATTCATGTAAAAAAGTACATCAATATAATCCTAATAAATCTAAAACATTT AGAAGATCTTTTATAAAACAAAATTTGCATATTGTTTTTGGATCTGGGTCAATAACTGGT ACATTAGGTAAAGACAATTTTATATTGGGCAATCATATAATACGCAATCAAACTTTTGGG TTAGTTAAAAGTGAAACTAGTGATAATTTAAATAATGCTGATAATGTTTTTGAATATATA AATTTTGAAGGTATAGTAGGGTTAGGTTTTCCTGGTATGCTAACTGCAGGAAATATTCCA TTTTTCGATAATTTATTAAAACAATATAAAAATATGACACCTCAATTTTCTTTTTATATA TCTCCAAATGATGAAACATCTACATTTATAGTTGGTGGAATAAGCAAATCATATTATGAA GGAGATATATATATGTTACCTGTTGTTAAAGAATATTATTGGGAAGTTAAGTTAGATGCT ATATATATAGGAGATGAAAAAATATGTTGCGAAGAGGAAAGTTATGCAATATTTGATTCA GGAACTTCTTACAATACAATGCCTAGTACTCAAATAAGTAATTTTTTTAAGATTGTTTCA TCAAAACCATGTAATGAAGAAAATTATAACAATATATTAAAAGAATATCCAACTATAAAA TATGTTTTTGGAAAGTTAGTAATTGAACTATTACCCAATGAATATATGATTGTAAATGAC GATTTATGTGTTCCAGCTTATATGCAGATCGATGTTCCATCAGAAAATAATAATGCTTAT CTTCTTGGAACTATAGCTTTTATGAGACATTACTTTACAGTTTTTGTAAGAGGGCAAGAA GGGAATCCATCTATGGTTGGGGTGGCAAAAGCTAAACAGGTTTAA
  • Download Fasta

  • Fasta :-

    MKSIKILPVFYLVTFFLHNYNEIKCNKVYISGDNFMPCSECKDINKCGGCLFDNNEFLPS AIELKLTKKNRDNNNHDNLKIHHDSLKLGNVKYYVKRGEGVSGSFGNASGNDINSMAKIH NEIKNRTENKEENKSSLSFIDHINNNLGEGKGGYNFSRIQKHEQDGDKINAQEEFEKIKS QVVDKSVVSFSDRVLDENEGQTQPSKGVTVEETSDNVFLVPLQHLRDSQFVGKLLVGTPP QEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGSITG TLGKDNFILGNHIIRNQTFGLVKSETSDNLNNADNVFEYINFEGIVGLGFPGMLTAGNIP FFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYYEGDIYMLPVVKEYYWEVKLDA IYIGDEKICCEEESYAIFDSGTSYNTMPSTQISNFFKIVSSKPCNEENYNNILKEYPTIK YVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTVFVRGQE GNPSMVGVAKAKQV

  • title: catalytic residue
  • coordinates: D248,D439
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1222500381 SSFYISPNDE0.992unspPBANKA_1222500381 SSFYISPNDE0.992unspPBANKA_1222500381 SSFYISPNDE0.992unspPBANKA_1222500397 SGISKSYYEG0.994unspPBANKA_1222500435 YEEESYAIFD0.99unspPBANKA_1222500138 SKSSLSFIDH0.993unspPBANKA_1222500189 SKSVVSFSDR0.993unsp

PBANKA_122250      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India