PBANKA_1237900 | mitochondrial-processing peptidase subunit alpha, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1237900OTHER0.9829250.0002440.016832
No Results

  • Fasta :-

    >PBANKA_1237900 MNTNIQKLKLVLNKTKLGTKSYSHDVSKLKRNPNLEKLYTGDKHDFSKVIFKKEQIEDVI KEVKFDYYYFNEGKKNKYKDIPLNVSIIKESDLPPYKPVDEKLNFSILENDLKIISTNKN SGVCSIGLYIKCGSRYEEINDKINEQGMSVMIENMAFHSTAHLSHLRAIKSLEKIGANVS CNAFREHIVYTCECLNEYLPIVINLLIGNVLFPRFLSWEMKNNVNRLNTMRAKLFENNEM YITELLHNTAWYNNTLGNKLYVSESNIENYTSENLRNFMLKHFSPKNMTLVGINVDHNEL TKWTSRAFQDYVPIPYIKQKEVTPNYTGGFISVEDKNIKKTNIAIAYETKGGWKTSDMIT LTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIESCMAFSTQHSDTGLFGLYFTG DPANTKDIINSMALEFHKMNKCTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN RILSGKQLCDAIDAVTKEDINRVVSQFLKTKPTVVVYGNISHSPHYDEICKMLG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1237900.fa Sequence name : PBANKA_1237900 Sequence length : 534 VALUES OF COMPUTED PARAMETERS Coef20 : 3.855 CoefTot : -1.056 ChDiff : 9 ZoneTo : 24 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.688 1.671 0.160 0.628 MesoH : 0.165 0.445 -0.249 0.259 MuHd_075 : 10.065 11.887 4.429 3.440 MuHd_095 : 18.057 10.330 6.795 3.285 MuHd_100 : 25.304 13.140 8.776 5.180 MuHd_105 : 31.766 18.013 10.442 6.762 Hmax_075 : 4.500 5.400 -0.464 3.080 Hmax_095 : 1.487 5.900 -1.488 1.558 Hmax_100 : 10.900 8.700 1.575 3.940 Hmax_105 : 12.800 13.900 2.629 5.390 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9125 0.0875 DFMC : 0.8269 0.1731
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 534 PBANKA_1237900 MNTNIQKLKLVLNKTKLGTKSYSHDVSKLKRNPNLEKLYTGDKHDFSKVIFKKEQIEDVIKEVKFDYYYFNEGKKNKYKD 80 IPLNVSIIKESDLPPYKPVDEKLNFSILENDLKIISTNKNSGVCSIGLYIKCGSRYEEINDKINEQGMSVMIENMAFHST 160 AHLSHLRAIKSLEKIGANVSCNAFREHIVYTCECLNEYLPIVINLLIGNVLFPRFLSWEMKNNVNRLNTMRAKLFENNEM 240 YITELLHNTAWYNNTLGNKLYVSESNIENYTSENLRNFMLKHFSPKNMTLVGINVDHNELTKWTSRAFQDYVPIPYIKQK 320 EVTPNYTGGFISVEDKNIKKTNIAIAYETKGGWKTSDMITLTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIES 400 CMAFSTQHSDTGLFGLYFTGDPANTKDIINSMALEFHKMNKCTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN 480 RILSGKQLCDAIDAVTKEDINRVVSQFLKTKPTVVVYGNISHSPHYDEICKMLG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1237900 7 MNTNIQK|LK 0.057 . PBANKA_1237900 9 TNIQKLK|LV 0.081 . PBANKA_1237900 14 LKLVLNK|TK 0.056 . PBANKA_1237900 16 LVLNKTK|LG 0.061 . PBANKA_1237900 20 KTKLGTK|SY 0.071 . PBANKA_1237900 28 YSHDVSK|LK 0.061 . PBANKA_1237900 30 HDVSKLK|RN 0.061 . PBANKA_1237900 31 DVSKLKR|NP 0.126 . PBANKA_1237900 37 RNPNLEK|LY 0.062 . PBANKA_1237900 43 KLYTGDK|HD 0.058 . PBANKA_1237900 48 DKHDFSK|VI 0.086 . PBANKA_1237900 52 FSKVIFK|KE 0.062 . PBANKA_1237900 53 SKVIFKK|EQ 0.096 . PBANKA_1237900 61 QIEDVIK|EV 0.064 . PBANKA_1237900 64 DVIKEVK|FD 0.062 . PBANKA_1237900 74 YYFNEGK|KN 0.055 . PBANKA_1237900 75 YFNEGKK|NK 0.081 . PBANKA_1237900 77 NEGKKNK|YK 0.079 . PBANKA_1237900 79 GKKNKYK|DI 0.083 . PBANKA_1237900 89 LNVSIIK|ES 0.055 . PBANKA_1237900 97 SDLPPYK|PV 0.083 . PBANKA_1237900 102 YKPVDEK|LN 0.064 . PBANKA_1237900 113 ILENDLK|II 0.069 . PBANKA_1237900 119 KIISTNK|NS 0.061 . PBANKA_1237900 131 SIGLYIK|CG 0.065 . PBANKA_1237900 135 YIKCGSR|YE 0.075 . PBANKA_1237900 142 YEEINDK|IN 0.070 . PBANKA_1237900 167 AHLSHLR|AI 0.085 . PBANKA_1237900 170 SHLRAIK|SL 0.289 . PBANKA_1237900 174 AIKSLEK|IG 0.053 . PBANKA_1237900 185 VSCNAFR|EH 0.085 . PBANKA_1237900 214 GNVLFPR|FL 0.124 . PBANKA_1237900 221 FLSWEMK|NN 0.075 . PBANKA_1237900 226 MKNNVNR|LN 0.092 . PBANKA_1237900 231 NRLNTMR|AK 0.084 . PBANKA_1237900 233 LNTMRAK|LF 0.074 . PBANKA_1237900 259 NNTLGNK|LY 0.053 . PBANKA_1237900 276 YTSENLR|NF 0.085 . PBANKA_1237900 281 LRNFMLK|HF 0.115 . PBANKA_1237900 286 LKHFSPK|NM 0.075 . PBANKA_1237900 302 DHNELTK|WT 0.076 . PBANKA_1237900 306 LTKWTSR|AF 0.095 . PBANKA_1237900 318 VPIPYIK|QK 0.064 . PBANKA_1237900 320 IPYIKQK|EV 0.108 . PBANKA_1237900 336 FISVEDK|NI 0.068 . PBANKA_1237900 339 VEDKNIK|KT 0.063 . PBANKA_1237900 340 EDKNIKK|TN 0.087 . PBANKA_1237900 350 AIAYETK|GG 0.068 . PBANKA_1237900 354 ETKGGWK|TS 0.061 . PBANKA_1237900 381 STGGPGK|GM 0.067 . PBANKA_1237900 386 GKGMYSR|LF 0.097 . PBANKA_1237900 426 GDPANTK|DI 0.072 . PBANKA_1237900 438 MALEFHK|MN 0.059 . PBANKA_1237900 441 EFHKMNK|CT 0.080 . PBANKA_1237900 449 TDEELNR|AK 0.071 . PBANKA_1237900 451 EELNRAK|KS 0.067 . PBANKA_1237900 452 ELNRAKK|SL 0.483 . PBANKA_1237900 455 RAKKSLK|SF 0.078 . PBANKA_1237900 465 WMSLEYK|SI 0.081 . PBANKA_1237900 474 LMEDLAR|QM 0.080 . PBANKA_1237900 481 QMMILNR|IL 0.106 . PBANKA_1237900 486 NRILSGK|QL 0.096 . PBANKA_1237900 497 AIDAVTK|ED 0.058 . PBANKA_1237900 502 TKEDINR|VV 0.174 . PBANKA_1237900 509 VVSQFLK|TK 0.062 . PBANKA_1237900 511 SQFLKTK|PT 0.070 . PBANKA_1237900 531 HYDEICK|ML 0.068 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1237900 ATGAACACAAATATACAAAAGCTGAAACTTGTTCTTAACAAAACAAAATTGGGTACAAAA TCCTATAGTCATGATGTTTCCAAGTTAAAAAGAAATCCAAATTTAGAAAAATTATACACG GGGGATAAGCATGATTTTAGCAAGGTTATATTTAAAAAAGAACAAATAGAGGACGTAATA AAAGAAGTAAAATTTGATTATTATTATTTTAATGAAGGAAAAAAAAACAAATATAAAGAT ATACCATTGAATGTTTCTATAATTAAAGAGTCGGACTTACCACCTTATAAGCCAGTTGAT GAAAAATTAAATTTTTCTATCCTTGAAAATGACTTAAAAATCATTTCGACCAATAAAAAT AGTGGAGTATGTTCCATAGGATTATACATAAAATGTGGGTCTAGATATGAAGAAATAAAC GATAAAATAAATGAACAGGGGATGAGTGTGATGATTGAAAATATGGCATTTCATAGTACT GCTCATTTATCCCACTTAAGAGCCATAAAAAGTTTAGAAAAGATAGGAGCCAATGTTAGT TGTAATGCTTTTCGAGAACATATTGTATATACATGTGAATGCTTAAATGAATATTTGCCA ATAGTTATAAATTTATTAATAGGAAATGTTTTATTTCCACGTTTTTTATCATGGGAAATG AAAAATAATGTTAATAGATTAAATACTATGAGAGCAAAACTATTTGAGAATAATGAAATG TATATAACAGAATTATTGCATAATACAGCTTGGTATAATAATACACTAGGTAATAAATTA TATGTATCTGAATCGAACATAGAAAATTATACATCTGAAAATTTAAGAAATTTTATGTTA AAACATTTTTCTCCTAAAAATATGACATTAGTTGGTATCAATGTTGATCACAATGAATTA ACAAAATGGACTTCCAGAGCTTTTCAAGATTATGTCCCAATACCATATATTAAACAAAAA GAAGTAACTCCAAATTATACTGGCGGTTTTATAAGTGTTGAAGATAAAAATATAAAAAAA ACTAACATTGCTATAGCATATGAAACCAAAGGGGGGTGGAAAACATCTGATATGATTACA TTAACAGTTTTACAAACTTTGATGGGTGGTGGTGGTTCTTTTTCGACTGGTGGACCAGGA AAAGGAATGTATTCTCGATTATTTTTAAATGTTTTAAATAATTACAATTTTATAGAATCT TGCATGGCCTTTAGCACCCAACATTCAGACACTGGCCTTTTTGGATTATATTTTACAGGA GATCCAGCAAATACTAAAGATATAATTAATAGTATGGCATTAGAATTTCATAAAATGAAT AAATGTACTGATGAAGAATTAAATCGAGCTAAGAAAAGTTTAAAAAGCTTTATGTGGATG AGCTTAGAATATAAATCAATTTTAATGGAAGATTTAGCTAGGCAAATGATGATTCTAAAT AGGATACTTTCCGGAAAACAATTATGTGATGCTATTGATGCTGTAACTAAAGAAGATATT AACAGAGTTGTTTCACAATTTTTAAAAACCAAACCTACTGTGGTTGTATATGGAAACATT AGTCACTCCCCACATTATGATGAAATATGCAAAATGCTTGGATGA
  • Download Fasta

  • Fasta :-

    MNTNIQKLKLVLNKTKLGTKSYSHDVSKLKRNPNLEKLYTGDKHDFSKVIFKKEQIEDVI KEVKFDYYYFNEGKKNKYKDIPLNVSIIKESDLPPYKPVDEKLNFSILENDLKIISTNKN SGVCSIGLYIKCGSRYEEINDKINEQGMSVMIENMAFHSTAHLSHLRAIKSLEKIGANVS CNAFREHIVYTCECLNEYLPIVINLLIGNVLFPRFLSWEMKNNVNRLNTMRAKLFENNEM YITELLHNTAWYNNTLGNKLYVSESNIENYTSENLRNFMLKHFSPKNMTLVGINVDHNEL TKWTSRAFQDYVPIPYIKQKEVTPNYTGGFISVEDKNIKKTNIAIAYETKGGWKTSDMIT LTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIESCMAFSTQHSDTGLFGLYFTG DPANTKDIINSMALEFHKMNKCTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN RILSGKQLCDAIDAVTKEDINRVVSQFLKTKPTVVVYGNISHSPHYDEICKMLG

    No Results
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IDSitePeptideScoreMethod
PBANKA_1237900284 SLKHFSPKNM0.991unsp

PBANKA_123790      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India