PBANKA_1305600 | mitochondrial inner membrane protease ATP23, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1305600OTHER0.9999600.0000030.000038
No Results

  • Fasta :-

    >PBANKA_1305600 MMDELQNLVEKIKKYIQNVDNKIKNGDLRKNVEKFLLNNRTEKGQFNDMVSLIQYSLKYK DVCNWPNYNDLFIINYNINNNFKSIIQKNEKFLRHYKNHTSNEHEENITTESSRKNGEKT TNPINTDKSISSTKDKEIDNKKNCPSFSEHNQDNIAGNGNNNMDLNLMDKIKLNSKGINT NPKENRINIHYNDDITLFNRLKLQIFMYFVRNNYKVKLLIDSLSAMNHPINIIYINCPNN KYKKKNIFQKVSDLFLSDYKVNDEFINSKYNYQKNNCSCSELSSTSLNNNNDAYTQKKNA SNYTGGYNPISNTVWLCANNITNFYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIR AYNMSNQCGYFNSKHFLPNHDVFNYFKTPSINDTAKNKCIYNNTYTSLYQYKPCANNTHK YINDVFEKCIHDYWPFMCAPEQDSKYKPSKT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1305600.fa Sequence name : PBANKA_1305600 Sequence length : 451 VALUES OF COMPUTED PARAMETERS Coef20 : 3.211 CoefTot : 0.000 ChDiff : 14 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.288 0.918 -0.174 0.448 MesoH : -0.836 -0.111 -0.499 0.123 MuHd_075 : 18.348 6.270 4.030 2.517 MuHd_095 : 47.283 36.089 14.521 10.222 MuHd_100 : 55.287 39.704 16.520 11.498 MuHd_105 : 52.443 36.081 15.651 10.706 Hmax_075 : -5.700 4.200 -3.404 2.010 Hmax_095 : 9.600 19.200 1.603 6.000 Hmax_100 : 21.200 24.600 4.181 7.380 Hmax_105 : 17.400 21.400 3.659 7.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7061 0.2939 DFMC : 0.8875 0.1125
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 451 PBANKA_1305600 MMDELQNLVEKIKKYIQNVDNKIKNGDLRKNVEKFLLNNRTEKGQFNDMVSLIQYSLKYKDVCNWPNYNDLFIINYNINN 80 NFKSIIQKNEKFLRHYKNHTSNEHEENITTESSRKNGEKTTNPINTDKSISSTKDKEIDNKKNCPSFSEHNQDNIAGNGN 160 NNMDLNLMDKIKLNSKGINTNPKENRINIHYNDDITLFNRLKLQIFMYFVRNNYKVKLLIDSLSAMNHPINIIYINCPNN 240 KYKKKNIFQKVSDLFLSDYKVNDEFINSKYNYQKNNCSCSELSSTSLNNNNDAYTQKKNASNYTGGYNPISNTVWLCANN 320 ITNFYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCGYFNSKHFLPNHDVFNYFKTPSINDTAKNKCI 400 YNNTYTSLYQYKPCANNTHKYINDVFEKCIHDYWPFMCAPEQDSKYKPSKT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1305600 11 LQNLVEK|IK 0.065 . PBANKA_1305600 13 NLVEKIK|KY 0.068 . PBANKA_1305600 14 LVEKIKK|YI 0.105 . PBANKA_1305600 22 IQNVDNK|IK 0.065 . PBANKA_1305600 24 NVDNKIK|NG 0.058 . PBANKA_1305600 29 IKNGDLR|KN 0.088 . PBANKA_1305600 30 KNGDLRK|NV 0.133 . PBANKA_1305600 34 LRKNVEK|FL 0.076 . PBANKA_1305600 40 KFLLNNR|TE 0.068 . PBANKA_1305600 43 LNNRTEK|GQ 0.137 . PBANKA_1305600 58 LIQYSLK|YK 0.071 . PBANKA_1305600 60 QYSLKYK|DV 0.104 . PBANKA_1305600 83 NINNNFK|SI 0.102 . PBANKA_1305600 88 FKSIIQK|NE 0.062 . PBANKA_1305600 91 IIQKNEK|FL 0.072 . PBANKA_1305600 94 KNEKFLR|HY 0.096 . PBANKA_1305600 97 KFLRHYK|NH 0.119 . PBANKA_1305600 114 ITTESSR|KN 0.103 . PBANKA_1305600 115 TTESSRK|NG 0.081 . PBANKA_1305600 119 SRKNGEK|TT 0.084 . PBANKA_1305600 128 NPINTDK|SI 0.091 . PBANKA_1305600 134 KSISSTK|DK 0.074 . PBANKA_1305600 136 ISSTKDK|EI 0.096 . PBANKA_1305600 141 DKEIDNK|KN 0.066 . PBANKA_1305600 142 KEIDNKK|NC 0.070 . PBANKA_1305600 170 DLNLMDK|IK 0.057 . PBANKA_1305600 172 NLMDKIK|LN 0.089 . PBANKA_1305600 176 KIKLNSK|GI 0.064 . PBANKA_1305600 183 GINTNPK|EN 0.073 . PBANKA_1305600 186 TNPKENR|IN 0.109 . PBANKA_1305600 200 DITLFNR|LK 0.077 . PBANKA_1305600 202 TLFNRLK|LQ 0.057 . PBANKA_1305600 211 IFMYFVR|NN 0.089 . PBANKA_1305600 215 FVRNNYK|VK 0.054 . PBANKA_1305600 217 RNNYKVK|LL 0.090 . PBANKA_1305600 241 INCPNNK|YK 0.072 . PBANKA_1305600 243 CPNNKYK|KK 0.082 . PBANKA_1305600 244 PNNKYKK|KN 0.108 . PBANKA_1305600 245 NNKYKKK|NI 0.174 . PBANKA_1305600 250 KKNIFQK|VS 0.074 . PBANKA_1305600 260 LFLSDYK|VN 0.056 . PBANKA_1305600 269 DEFINSK|YN 0.069 . PBANKA_1305600 274 SKYNYQK|NN 0.064 . PBANKA_1305600 297 NDAYTQK|KN 0.066 . PBANKA_1305600 298 DAYTQKK|NA 0.139 . PBANKA_1305600 326 NITNFYK|LK 0.063 . PBANKA_1305600 328 TNFYKLK|YI 0.086 . PBANKA_1305600 343 HAFDFAR|AN 0.110 . PBANKA_1305600 360 IACSEIR|AY 0.098 . PBANKA_1305600 374 CGYFNSK|HF 0.061 . PBANKA_1305600 387 DVFNYFK|TP 0.059 . PBANKA_1305600 396 SINDTAK|NK 0.080 . PBANKA_1305600 398 NDTAKNK|CI 0.068 . PBANKA_1305600 412 TSLYQYK|PC 0.066 . PBANKA_1305600 420 CANNTHK|YI 0.087 . PBANKA_1305600 428 INDVFEK|CI 0.077 . PBANKA_1305600 445 APEQDSK|YK 0.060 . PBANKA_1305600 447 EQDSKYK|PS 0.071 . PBANKA_1305600 450 SKYKPSK|T- 0.074 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1305600 ATGATGGATGAACTACAAAATTTAGTGGAAAAAATAAAAAAATATATTCAAAATGTAGAT AATAAAATTAAAAATGGTGATTTAAGAAAAAATGTAGAAAAGTTTCTTTTAAATAATAGA ACAGAAAAAGGGCAATTTAATGATATGGTATCCTTAATACAATATTCGCTTAAGTATAAA GATGTATGTAATTGGCCTAATTACAACGATTTATTTATTATAAATTATAATATAAATAAT AATTTCAAATCAATTATACAAAAAAATGAAAAATTTCTTCGTCACTACAAAAACCATACA TCTAATGAGCACGAAGAAAATATAACCACAGAAAGTAGCAGAAAAAATGGCGAGAAAACA ACAAACCCAATTAATACTGATAAAAGTATATCCTCAACTAAGGATAAAGAAATAGATAAT AAAAAAAATTGTCCATCCTTTAGTGAGCATAATCAGGATAACATTGCTGGTAATGGCAAT AATAATATGGATCTAAATTTAATGGATAAAATTAAACTCAATTCCAAGGGAATTAATACA AATCCAAAAGAAAACAGAATTAATATACATTATAATGATGATATAACTCTATTTAATAGA CTAAAATTACAAATATTTATGTATTTTGTACGAAATAATTATAAAGTAAAACTGTTAATC GATTCATTGTCAGCAATGAACCATCCAATAAATATAATATATATAAATTGTCCAAATAAT AAATATAAAAAAAAAAACATTTTTCAAAAAGTTAGTGACTTATTTCTATCTGATTATAAA GTTAATGATGAATTTATTAACAGCAAATATAATTATCAGAAAAATAATTGCTCATGCTCT GAATTGTCATCAACTTCCTTAAATAATAATAATGATGCATATACACAAAAAAAAAATGCA TCCAATTATACAGGTGGTTATAATCCTATAAGTAATACTGTATGGCTTTGTGCAAATAAC ATTACTAATTTTTATAAATTAAAATATATATTAACACATGAACTTATCCATGCCTTTGAT TTTGCTAGAGCAAATATCGACATGTATAATTGCCACCACATTGCTTGCTCAGAAATAAGA GCTTACAACATGAGCAATCAATGTGGCTACTTTAATAGTAAGCACTTTTTACCTAATCAC GATGTTTTTAATTATTTTAAAACGCCATCAATTAATGATACTGCAAAAAATAAATGTATA TATAATAATACATACACATCATTATATCAATATAAACCTTGCGCTAATAATACTCATAAA TATATAAATGATGTTTTTGAAAAATGTATACATGATTATTGGCCATTCATGTGTGCGCCG GAACAAGACAGTAAGTATAAGCCATCCAAAACTTAA
  • Download Fasta

  • Fasta :-

    MMDELQNLVEKIKKYIQNVDNKIKNGDLRKNVEKFLLNNRTEKGQFNDMVSLIQYSLKYK DVCNWPNYNDLFIINYNINNNFKSIIQKNEKFLRHYKNHTSNEHEENITTESSRKNGEKT TNPINTDKSISSTKDKEIDNKKNCPSFSEHNQDNIAGNGNNNMDLNLMDKIKLNSKGINT NPKENRINIHYNDDITLFNRLKLQIFMYFVRNNYKVKLLIDSLSAMNHPINIIYINCPNN KYKKKNIFQKVSDLFLSDYKVNDEFINSKYNYQKNNCSCSELSSTSLNNNNDAYTQKKNA SNYTGGYNPISNTVWLCANNITNFYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIR AYNMSNQCGYFNSKHFLPNHDVFNYFKTPSINDTAKNKCIYNNTYTSLYQYKPCANNTHK YINDVFEKCIHDYWPFMCAPEQDSKYKPSKT

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1305600132 SKSISSTKDK0.998unspPBANKA_1305600132 SKSISSTKDK0.998unspPBANKA_1305600132 SKSISSTKDK0.998unspPBANKA_1305600113 STTESSRKNG0.996unspPBANKA_1305600129 SNTDKSISST0.994unsp

PBANKA_130560      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India