PBANKA_1309900 | M17 leucyl aminopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1309900OTHER0.9812160.0000900.018694
No Results

  • Fasta :-

    >PBANKA_1309900 MYLTRLNINFVDKIFENKFYKNIIKRYYFYNIKHSQKKFFFSFFISNSIKNKNNYNSDCR EFLTFNTYHYQKTPKYKIESLNFSKTIKKFYSTNNIKNFNISFSKFEKMSLKVPQVINLD PTVLPVNYTTPIDDIEIVLKDGIKESCNFDDGLAIFLVNSKSEKDNGNTKISSQIKDSKI NEFLSKNDDIFNGKLGTFKSFYMANEKNKYINLSFIRCGTIDEEMTEFEIRKIVSSLVQI LHDNKSVSTSIIFEIGINESLFRFFLETVFYEYVVDERFKSNDNKSSGNSENMKNLQIFL RNYNNNYNKQVKKSRTYFMGTYFASQLISAPSNYCNPVSLANVSVELAEKLNLECKILGI KELENLKMGAYLSVGKGSMYPNRFIHLTYKGKGDIKKKIALVGKGITFDSGGYNLKASPG SMIDLMKFDMSGCAAVLGCAYCIGSIKPENVEVHFLSAVCENMVSKNSYRPGDIITASNG KTIEVGNTDAEGRLTLADALVYAENIGVDHIIDIATLTGAMLYSLGTSYAGVFGNDNKLI NKILESSKSSNEPVWWLPIIKEYRASLNSKYADINNISSNVKASSVVASLFLNEFIQSTS WAHIDIAGVAWNFKDRKPKGFGVRLLSEFILNHSI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1309900.fa Sequence name : PBANKA_1309900 Sequence length : 635 VALUES OF COMPUTED PARAMETERS Coef20 : 3.930 CoefTot : -0.046 ChDiff : 15 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.724 1.629 0.559 0.571 MesoH : -0.267 0.451 -0.240 0.265 MuHd_075 : 22.508 14.064 6.617 4.185 MuHd_095 : 33.098 21.769 8.956 7.158 MuHd_100 : 30.158 18.920 7.479 5.809 MuHd_105 : 26.075 14.733 5.861 4.341 Hmax_075 : 5.133 13.183 -0.193 3.547 Hmax_095 : 4.463 12.688 -1.043 4.217 Hmax_100 : 0.400 7.900 -1.977 2.780 Hmax_105 : 3.800 8.575 -1.317 3.190 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7211 0.2789 DFMC : 0.8539 0.1461
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 635 PBANKA_1309900 MYLTRLNINFVDKIFENKFYKNIIKRYYFYNIKHSQKKFFFSFFISNSIKNKNNYNSDCREFLTFNTYHYQKTPKYKIES 80 LNFSKTIKKFYSTNNIKNFNISFSKFEKMSLKVPQVINLDPTVLPVNYTTPIDDIEIVLKDGIKESCNFDDGLAIFLVNS 160 KSEKDNGNTKISSQIKDSKINEFLSKNDDIFNGKLGTFKSFYMANEKNKYINLSFIRCGTIDEEMTEFEIRKIVSSLVQI 240 LHDNKSVSTSIIFEIGINESLFRFFLETVFYEYVVDERFKSNDNKSSGNSENMKNLQIFLRNYNNNYNKQVKKSRTYFMG 320 TYFASQLISAPSNYCNPVSLANVSVELAEKLNLECKILGIKELENLKMGAYLSVGKGSMYPNRFIHLTYKGKGDIKKKIA 400 LVGKGITFDSGGYNLKASPGSMIDLMKFDMSGCAAVLGCAYCIGSIKPENVEVHFLSAVCENMVSKNSYRPGDIITASNG 480 KTIEVGNTDAEGRLTLADALVYAENIGVDHIIDIATLTGAMLYSLGTSYAGVFGNDNKLINKILESSKSSNEPVWWLPII 560 KEYRASLNSKYADINNISSNVKASSVVASLFLNEFIQSTSWAHIDIAGVAWNFKDRKPKGFGVRLLSEFILNHSI 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1309900 5 --MYLTR|LN 0.077 . PBANKA_1309900 13 NINFVDK|IF 0.069 . PBANKA_1309900 18 DKIFENK|FY 0.068 . PBANKA_1309900 21 FENKFYK|NI 0.069 . PBANKA_1309900 25 FYKNIIK|RY 0.055 . PBANKA_1309900 26 YKNIIKR|YY 0.259 . PBANKA_1309900 33 YYFYNIK|HS 0.059 . PBANKA_1309900 37 NIKHSQK|KF 0.066 . PBANKA_1309900 38 IKHSQKK|FF 0.137 . PBANKA_1309900 50 FISNSIK|NK 0.066 . PBANKA_1309900 52 SNSIKNK|NN 0.076 . PBANKA_1309900 60 NYNSDCR|EF 0.075 . PBANKA_1309900 72 NTYHYQK|TP 0.060 . PBANKA_1309900 75 HYQKTPK|YK 0.081 . PBANKA_1309900 77 QKTPKYK|IE 0.070 . PBANKA_1309900 85 ESLNFSK|TI 0.060 . PBANKA_1309900 88 NFSKTIK|KF 0.064 . PBANKA_1309900 89 FSKTIKK|FY 0.112 . PBANKA_1309900 97 YSTNNIK|NF 0.059 . PBANKA_1309900 105 FNISFSK|FE 0.064 . PBANKA_1309900 108 SFSKFEK|MS 0.075 . PBANKA_1309900 112 FEKMSLK|VP 0.059 . PBANKA_1309900 140 DIEIVLK|DG 0.066 . PBANKA_1309900 144 VLKDGIK|ES 0.058 . PBANKA_1309900 161 IFLVNSK|SE 0.068 . PBANKA_1309900 164 VNSKSEK|DN 0.097 . PBANKA_1309900 170 KDNGNTK|IS 0.077 . PBANKA_1309900 176 KISSQIK|DS 0.092 . PBANKA_1309900 179 SQIKDSK|IN 0.062 . PBANKA_1309900 186 INEFLSK|ND 0.064 . PBANKA_1309900 194 DDIFNGK|LG 0.057 . PBANKA_1309900 199 GKLGTFK|SF 0.074 . PBANKA_1309900 207 FYMANEK|NK 0.057 . PBANKA_1309900 209 MANEKNK|YI 0.081 . PBANKA_1309900 217 INLSFIR|CG 0.087 . PBANKA_1309900 231 MTEFEIR|KI 0.098 . PBANKA_1309900 232 TEFEIRK|IV 0.112 . PBANKA_1309900 245 QILHDNK|SV 0.102 . PBANKA_1309900 263 INESLFR|FF 0.094 . PBANKA_1309900 278 EYVVDER|FK 0.082 . PBANKA_1309900 280 VVDERFK|SN 0.073 . PBANKA_1309900 285 FKSNDNK|SS 0.161 . PBANKA_1309900 294 GNSENMK|NL 0.077 . PBANKA_1309900 301 NLQIFLR|NY 0.082 . PBANKA_1309900 309 YNNNYNK|QV 0.102 . PBANKA_1309900 312 NYNKQVK|KS 0.074 . PBANKA_1309900 313 YNKQVKK|SR 0.146 . PBANKA_1309900 315 KQVKKSR|TY 0.105 . PBANKA_1309900 350 SVELAEK|LN 0.053 . PBANKA_1309900 356 KLNLECK|IL 0.081 . PBANKA_1309900 361 CKILGIK|EL 0.059 . PBANKA_1309900 367 KELENLK|MG 0.051 . PBANKA_1309900 376 AYLSVGK|GS 0.057 . PBANKA_1309900 383 GSMYPNR|FI 0.133 . PBANKA_1309900 390 FIHLTYK|GK 0.081 . PBANKA_1309900 392 HLTYKGK|GD 0.069 . PBANKA_1309900 396 KGKGDIK|KK 0.059 . PBANKA_1309900 397 GKGDIKK|KI 0.126 . PBANKA_1309900 398 KGDIKKK|IA 0.115 . PBANKA_1309900 404 KIALVGK|GI 0.070 . PBANKA_1309900 416 SGGYNLK|AS 0.062 . PBANKA_1309900 427 SMIDLMK|FD 0.071 . PBANKA_1309900 447 YCIGSIK|PE 0.062 . PBANKA_1309900 466 CENMVSK|NS 0.066 . PBANKA_1309900 470 VSKNSYR|PG 0.104 . PBANKA_1309900 481 ITASNGK|TI 0.071 . PBANKA_1309900 493 NTDAEGR|LT 0.071 . PBANKA_1309900 538 VFGNDNK|LI 0.071 . PBANKA_1309900 542 DNKLINK|IL 0.063 . PBANKA_1309900 548 KILESSK|SS 0.071 . PBANKA_1309900 561 WWLPIIK|EY 0.066 . PBANKA_1309900 564 PIIKEYR|AS 0.079 . PBANKA_1309900 570 RASLNSK|YA 0.095 . PBANKA_1309900 582 NISSNVK|AS 0.073 . PBANKA_1309900 614 GVAWNFK|DR 0.078 . PBANKA_1309900 616 AWNFKDR|KP 0.090 . PBANKA_1309900 617 WNFKDRK|PK 0.099 . PBANKA_1309900 619 FKDRKPK|GF 0.238 . PBANKA_1309900 624 PKGFGVR|LL 0.098 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1309900 ATGTATCTAACACGGTTGAATATAAATTTTGTTGATAAAATATTTGAAAATAAGTTTTAT AAAAATATTATTAAACGTTATTATTTTTATAATATAAAACACAGTCAAAAAAAATTTTTT TTTTCTTTTTTTATATCTAATAGTATAAAAAATAAAAACAATTACAATAGTGATTGTCGT GAATTTCTAACATTTAACACATATCACTATCAGAAAACTCCAAAATATAAAATAGAATCC TTGAATTTCTCAAAAACAATAAAAAAGTTTTATAGCACTAATAATATAAAAAATTTTAAT ATTTCTTTTTCTAAATTTGAAAAAATGTCACTTAAAGTTCCACAAGTAATTAATCTCGAT CCAACTGTTTTACCAGTAAACTACACGACTCCAATTGATGATATAGAAATTGTATTAAAA GATGGAATAAAAGAAAGTTGTAATTTTGATGATGGATTAGCAATATTTTTAGTTAACTCT AAATCTGAAAAAGATAATGGAAATACAAAAATAAGTTCACAAATTAAGGATAGTAAAATA AATGAATTTTTATCAAAAAATGATGATATTTTTAATGGAAAATTAGGAACATTTAAAAGC TTTTATATGGCCAATGAAAAAAATAAATATATAAATTTATCTTTTATTAGATGTGGAACA ATTGATGAAGAAATGACAGAATTTGAAATTCGAAAAATAGTATCTAGTTTAGTTCAAATA TTACATGATAATAAGTCTGTATCTACGTCTATAATATTTGAAATAGGAATAAATGAATCA TTATTTCGATTCTTTTTAGAAACAGTTTTTTATGAATATGTAGTTGATGAGAGATTTAAA TCAAACGATAATAAAAGTTCTGGAAACTCAGAAAATATGAAAAACTTACAAATATTTTTA AGAAATTATAACAATAATTATAATAAGCAAGTTAAAAAATCTCGAACATATTTTATGGGT ACATATTTTGCATCCCAACTTATTTCAGCTCCGTCAAATTATTGTAACCCAGTTTCTTTA GCAAATGTATCTGTTGAATTAGCAGAAAAATTAAATCTAGAATGTAAAATTTTGGGAATA AAAGAACTTGAAAATTTAAAAATGGGGGCATATTTATCAGTAGGAAAAGGTAGTATGTAT CCAAATAGATTTATCCATTTAACTTATAAAGGAAAAGGAGATATTAAAAAGAAAATCGCA TTGGTTGGGAAAGGTATAACTTTTGATTCAGGGGGATATAATTTAAAAGCTTCGCCAGGA TCAATGATTGATTTAATGAAATTTGACATGAGTGGATGCGCAGCTGTTTTAGGATGTGCT TATTGTATTGGATCTATAAAACCAGAAAATGTTGAAGTTCATTTTTTAAGTGCAGTATGT GAAAATATGGTTTCTAAAAATTCTTATCGACCTGGTGATATTATAACTGCATCTAATGGG AAAACTATTGAAGTAGGAAATACAGATGCAGAAGGAAGATTAACATTAGCAGATGCATTA GTATATGCTGAAAATATTGGTGTTGATCATATTATCGATATAGCTACATTAACAGGTGCT ATGTTATATTCATTAGGAACAAGTTATGCTGGTGTTTTTGGAAATGATAATAAGTTAATT AACAAAATATTAGAATCGTCTAAGAGTTCTAATGAGCCTGTATGGTGGTTACCAATAATT AAAGAATATAGAGCATCTTTAAATTCAAAATATGCAGATATAAATAATATATCATCAAAT GTTAAGGCATCTTCTGTTGTTGCATCTTTATTTTTGAATGAATTTATTCAATCTACATCT TGGGCTCATATAGATATTGCTGGTGTTGCCTGGAATTTTAAAGATAGAAAGCCAAAAGGT TTTGGAGTTCGACTTTTATCTGAGTTTATATTAAATCATTCTATTTAA
  • Download Fasta

  • Fasta :-

    MYLTRLNINFVDKIFENKFYKNIIKRYYFYNIKHSQKKFFFSFFISNSIKNKNNYNSDCR EFLTFNTYHYQKTPKYKIESLNFSKTIKKFYSTNNIKNFNISFSKFEKMSLKVPQVINLD PTVLPVNYTTPIDDIEIVLKDGIKESCNFDDGLAIFLVNSKSEKDNGNTKISSQIKDSKI NEFLSKNDDIFNGKLGTFKSFYMANEKNKYINLSFIRCGTIDEEMTEFEIRKIVSSLVQI LHDNKSVSTSIIFEIGINESLFRFFLETVFYEYVVDERFKSNDNKSSGNSENMKNLQIFL RNYNNNYNKQVKKSRTYFMGTYFASQLISAPSNYCNPVSLANVSVELAEKLNLECKILGI KELENLKMGAYLSVGKGSMYPNRFIHLTYKGKGDIKKKIALVGKGITFDSGGYNLKASPG SMIDLMKFDMSGCAAVLGCAYCIGSIKPENVEVHFLSAVCENMVSKNSYRPGDIITASNG KTIEVGNTDAEGRLTLADALVYAENIGVDHIIDIATLTGAMLYSLGTSYAGVFGNDNKLI NKILESSKSSNEPVWWLPIIKEYRASLNSKYADINNISSNVKASSVVASLFLNEFIQSTS WAHIDIAGVAWNFKDRKPKGFGVRLLSEFILNHSI

  • title: Substrate-binding/catalytic site
  • coordinates: K404,D409,K416,D429,D489,E491,R493,L517
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1309900421 SASPGSMIDL0.994unspPBANKA_1309900421 SASPGSMIDL0.994unspPBANKA_1309900421 SASPGSMIDL0.994unspPBANKA_1309900468 SVSKNSYRPG0.994unspPBANKA_1309900162 SVNSKSEKDN0.996unspPBANKA_1309900286 SNDNKSSGNS0.991unsp

PBANKA_130990      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India