PBANKA_1318100 | aminopeptidase P, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1318100SP0.0488590.9254080.025733CS pos: 18-19. IHA-NF. Pr: 0.9545
No Results

  • Fasta :-

    >PBANKA_1318100 MRINSLIYANLLLTAIHANFFSKGNKANYVSAYINSFHHINNNNNNDNKINIEDNNKIND TNTGKRQDQLNNFFTRRFYTFHNKNQYLREEKRNSKEVNLTNNNTNSYNMESSNEQNNQM MGGDSYKERLQNLKKYMAEHNIDVYIIINSDAHNSEIINDQDKKIYYLTNYSGADGILIL TKDAQIIYVNALYELQANKELDTKFFTLKVGRITNRDEIFQTIADLKFNTIAFDGKNTSV SFYEKLKDKIKIQFPDKKIQEKFIYKNSINQVVKDNNINLYVLESPLVTVPNSDVNKKPI FIYSREFGGSCAAQKIQESFDFFIENPDVDSLLLSELDEIAYLLNLRGYDYKYSPLFYSY VYLKYNRDKGIIDDIILFTKVENVQKNVLAHLERIHVKLMDYDSVVSYLTNNVSSKSENT KNNNGKNIILGSVHENRSPRYDISLSPHINLMIYMLFNKEKVLLKKSPIADMKAVKNYVE IDSIKEAHVLDGLALLQFFHWCEEKRKTKELFKETEISLRDKIDYFRSTKKNFIFPSFST ISAIGPNSAVIHYESTEDTNAKITPNIYLLDSGGQYLHGTTDVTRTTHFGEPTPEEKKLY TLVLKGHLSLRKVIFASYTNSMALDFLARQPLFNNFLDYNHGTGHGVGTCLNVHEGGCSI SPATGTPLKENMVLSNEPGYYWADHFGIRIENMQYVVTKKQTNDAKFLTFNDLTLYPYEK KLLDYYLLTPEEIADINEYHQTIRNTLLPRIKENPSDYAKGIDQYLMDITEPIHTK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1318100.fa Sequence name : PBANKA_1318100 Sequence length : 776 VALUES OF COMPUTED PARAMETERS Coef20 : 4.545 CoefTot : -1.496 ChDiff : -3 ZoneTo : 46 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.353 1.306 0.102 0.561 MesoH : -0.370 0.150 -0.371 0.196 MuHd_075 : 23.437 22.593 6.924 6.902 MuHd_095 : 18.577 14.765 5.900 5.332 MuHd_100 : 18.372 18.325 7.517 5.310 MuHd_105 : 26.155 26.824 10.467 6.757 Hmax_075 : 13.912 26.000 1.689 5.880 Hmax_095 : 13.737 13.913 -1.214 5.862 Hmax_100 : 3.800 7.700 -0.760 3.800 Hmax_105 : 10.850 16.683 1.597 5.763 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4277 0.5723 DFMC : 0.3817 0.6183 This protein is probably imported in mitochondria. f(Ser) = 0.0870 f(Arg) = 0.0217 CMi = 0.86580 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 776 PBANKA_1318100 MRINSLIYANLLLTAIHANFFSKGNKANYVSAYINSFHHINNNNNNDNKINIEDNNKINDTNTGKRQDQLNNFFTRRFYT 80 FHNKNQYLREEKRNSKEVNLTNNNTNSYNMESSNEQNNQMMGGDSYKERLQNLKKYMAEHNIDVYIIINSDAHNSEIIND 160 QDKKIYYLTNYSGADGILILTKDAQIIYVNALYELQANKELDTKFFTLKVGRITNRDEIFQTIADLKFNTIAFDGKNTSV 240 SFYEKLKDKIKIQFPDKKIQEKFIYKNSINQVVKDNNINLYVLESPLVTVPNSDVNKKPIFIYSREFGGSCAAQKIQESF 320 DFFIENPDVDSLLLSELDEIAYLLNLRGYDYKYSPLFYSYVYLKYNRDKGIIDDIILFTKVENVQKNVLAHLERIHVKLM 400 DYDSVVSYLTNNVSSKSENTKNNNGKNIILGSVHENRSPRYDISLSPHINLMIYMLFNKEKVLLKKSPIADMKAVKNYVE 480 IDSIKEAHVLDGLALLQFFHWCEEKRKTKELFKETEISLRDKIDYFRSTKKNFIFPSFSTISAIGPNSAVIHYESTEDTN 560 AKITPNIYLLDSGGQYLHGTTDVTRTTHFGEPTPEEKKLYTLVLKGHLSLRKVIFASYTNSMALDFLARQPLFNNFLDYN 640 HGTGHGVGTCLNVHEGGCSISPATGTPLKENMVLSNEPGYYWADHFGIRIENMQYVVTKKQTNDAKFLTFNDLTLYPYEK 720 KLLDYYLLTPEEIADINEYHQTIRNTLLPRIKENPSDYAKGIDQYLMDITEPIHTK 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ........................................................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1318100 2 -----MR|IN 0.094 . PBANKA_1318100 23 HANFFSK|GN 0.079 . PBANKA_1318100 26 FFSKGNK|AN 0.064 . PBANKA_1318100 49 NNNNDNK|IN 0.064 . PBANKA_1318100 57 NIEDNNK|IN 0.058 . PBANKA_1318100 65 NDTNTGK|RQ 0.060 . PBANKA_1318100 66 DTNTGKR|QD 0.118 . PBANKA_1318100 76 LNNFFTR|RF 0.094 . PBANKA_1318100 77 NNFFTRR|FY 0.150 . PBANKA_1318100 84 FYTFHNK|NQ 0.055 . PBANKA_1318100 89 NKNQYLR|EE 0.076 . PBANKA_1318100 92 QYLREEK|RN 0.103 . PBANKA_1318100 93 YLREEKR|NS 0.171 . PBANKA_1318100 96 EEKRNSK|EV 0.114 . PBANKA_1318100 127 MGGDSYK|ER 0.064 . PBANKA_1318100 129 GDSYKER|LQ 0.106 . PBANKA_1318100 134 ERLQNLK|KY 0.061 . PBANKA_1318100 135 RLQNLKK|YM 0.100 . PBANKA_1318100 163 IINDQDK|KI 0.066 . PBANKA_1318100 164 INDQDKK|IY 0.078 . PBANKA_1318100 182 GILILTK|DA 0.076 . PBANKA_1318100 199 YELQANK|EL 0.067 . PBANKA_1318100 204 NKELDTK|FF 0.061 . PBANKA_1318100 209 TKFFTLK|VG 0.060 . PBANKA_1318100 212 FTLKVGR|IT 0.083 . PBANKA_1318100 216 VGRITNR|DE 0.096 . PBANKA_1318100 227 QTIADLK|FN 0.074 . PBANKA_1318100 236 TIAFDGK|NT 0.076 . PBANKA_1318100 245 SVSFYEK|LK 0.074 . PBANKA_1318100 247 SFYEKLK|DK 0.075 . PBANKA_1318100 249 YEKLKDK|IK 0.063 . PBANKA_1318100 251 KLKDKIK|IQ 0.065 . PBANKA_1318100 257 KIQFPDK|KI 0.065 . PBANKA_1318100 258 IQFPDKK|IQ 0.097 . PBANKA_1318100 262 DKKIQEK|FI 0.074 . PBANKA_1318100 266 QEKFIYK|NS 0.058 . PBANKA_1318100 274 SINQVVK|DN 0.083 . PBANKA_1318100 297 PNSDVNK|KP 0.066 . PBANKA_1318100 298 NSDVNKK|PI 0.108 . PBANKA_1318100 305 PIFIYSR|EF 0.091 . PBANKA_1318100 315 GSCAAQK|IQ 0.066 . PBANKA_1318100 347 AYLLNLR|GY 0.070 . PBANKA_1318100 352 LRGYDYK|YS 0.066 . PBANKA_1318100 364 YSYVYLK|YN 0.069 . PBANKA_1318100 367 VYLKYNR|DK 0.104 . PBANKA_1318100 369 LKYNRDK|GI 0.081 . PBANKA_1318100 380 DIILFTK|VE 0.058 . PBANKA_1318100 386 KVENVQK|NV 0.075 . PBANKA_1318100 394 VLAHLER|IH 0.075 . PBANKA_1318100 398 LERIHVK|LM 0.063 . PBANKA_1318100 416 TNNVSSK|SE 0.107 . PBANKA_1318100 421 SKSENTK|NN 0.074 . PBANKA_1318100 426 TKNNNGK|NI 0.086 . PBANKA_1318100 437 GSVHENR|SP 0.122 . PBANKA_1318100 440 HENRSPR|YD 0.314 . PBANKA_1318100 459 IYMLFNK|EK 0.053 . PBANKA_1318100 461 MLFNKEK|VL 0.068 . PBANKA_1318100 465 KEKVLLK|KS 0.059 . PBANKA_1318100 466 EKVLLKK|SP 0.127 . PBANKA_1318100 473 SPIADMK|AV 0.084 . PBANKA_1318100 476 ADMKAVK|NY 0.061 . PBANKA_1318100 485 VEIDSIK|EA 0.068 . PBANKA_1318100 505 FHWCEEK|RK 0.060 . PBANKA_1318100 506 HWCEEKR|KT 0.170 . PBANKA_1318100 507 WCEEKRK|TK 0.081 . PBANKA_1318100 509 EEKRKTK|EL 0.167 . PBANKA_1318100 513 KTKELFK|ET 0.072 . PBANKA_1318100 520 ETEISLR|DK 0.111 . PBANKA_1318100 522 EISLRDK|ID 0.059 . PBANKA_1318100 527 DKIDYFR|ST 0.124 . PBANKA_1318100 530 DYFRSTK|KN 0.093 . PBANKA_1318100 531 YFRSTKK|NF 0.075 . PBANKA_1318100 562 TEDTNAK|IT 0.064 . PBANKA_1318100 585 GTTDVTR|TT 0.117 . PBANKA_1318100 597 EPTPEEK|KL 0.060 . PBANKA_1318100 598 PTPEEKK|LY 0.079 . PBANKA_1318100 605 LYTLVLK|GH 0.055 . PBANKA_1318100 611 KGHLSLR|KV 0.113 . PBANKA_1318100 612 GHLSLRK|VI 0.079 . PBANKA_1318100 629 ALDFLAR|QP 0.067 . PBANKA_1318100 669 ATGTPLK|EN 0.056 . PBANKA_1318100 689 ADHFGIR|IE 0.079 . PBANKA_1318100 699 MQYVVTK|KQ 0.066 . PBANKA_1318100 700 QYVVTKK|QT 0.109 . PBANKA_1318100 706 KQTNDAK|FL 0.071 . PBANKA_1318100 720 TLYPYEK|KL 0.059 . PBANKA_1318100 721 LYPYEKK|LL 0.091 . PBANKA_1318100 744 EYHQTIR|NT 0.069 . PBANKA_1318100 750 RNTLLPR|IK 0.075 . PBANKA_1318100 752 TLLPRIK|EN 0.056 . PBANKA_1318100 760 NPSDYAK|GI 0.134 . PBANKA_1318100 776 TEPIHTK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1318100 ATGCGTATAAATTCGCTTATATATGCAAACTTGTTGCTTACGGCCATCCATGCAAACTTC TTTAGCAAAGGAAATAAGGCAAATTACGTTTCAGCTTATATAAATTCATTCCACCATATT AATAATAATAACAATAATGATAATAAGATAAATATCGAAGATAATAACAAAATAAATGAT ACTAACACAGGAAAACGTCAAGACCAATTAAATAATTTTTTTACTAGGAGGTTTTATACT TTTCATAACAAAAATCAATATTTAAGAGAAGAAAAGAGAAACTCAAAAGAAGTTAATTTA ACCAACAACAATACCAATAGCTACAATATGGAATCTTCAAATGAGCAAAACAACCAAATG ATGGGTGGGGATTCGTATAAAGAGAGACTTCAAAATTTAAAAAAATATATGGCTGAACAT AATATTGATGTTTACATCATAATAAATAGTGACGCACACAATTCTGAAATTATAAATGAT CAAGATAAAAAAATTTATTATTTAACTAATTATAGTGGTGCTGATGGAATATTAATATTA ACAAAAGATGCACAAATAATATATGTAAATGCTTTATATGAATTACAAGCTAATAAAGAA TTAGATACAAAATTCTTTACTCTTAAAGTTGGTAGAATAACAAATAGAGATGAAATTTTT CAAACAATCGCCGATCTTAAATTTAATACTATTGCTTTTGATGGAAAAAATACAAGTGTT TCTTTTTATGAAAAATTAAAAGATAAAATAAAAATTCAATTCCCCGATAAAAAAATCCAA GAAAAATTCATATATAAAAACTCTATTAATCAAGTTGTTAAAGATAATAATATTAATTTA TATGTATTAGAATCACCATTAGTTACTGTACCAAACAGTGATGTAAATAAAAAACCGATA TTTATATATAGCAGAGAATTTGGTGGCTCTTGTGCTGCACAAAAAATTCAAGAATCTTTT GATTTTTTCATCGAGAACCCTGATGTAGATTCTTTGTTACTTTCTGAACTTGATGAAATA GCTTATTTGCTTAATTTAAGAGGTTATGACTACAAATATTCTCCATTATTTTATTCCTAT GTATATCTTAAATATAATAGAGATAAAGGAATAATTGATGACATAATTTTATTCACTAAA GTTGAAAATGTTCAAAAAAATGTATTAGCTCATTTAGAAAGAATACATGTAAAACTTATG GATTATGACTCCGTTGTTTCATATTTAACAAATAATGTTTCATCCAAAAGCGAAAACACC AAAAATAATAATGGAAAAAATATTATCCTAGGAAGCGTACATGAAAATCGCAGTCCACGT TATGATATATCTCTAAGCCCGCATATCAACTTAATGATATACATGCTTTTTAACAAAGAA AAGGTTTTATTGAAAAAATCACCAATTGCAGATATGAAAGCAGTTAAAAATTATGTAGAA ATTGACAGTATTAAAGAAGCTCATGTTTTAGACGGTTTAGCTTTATTGCAATTTTTCCAT TGGTGTGAAGAAAAAAGAAAAACTAAAGAATTATTTAAGGAAACAGAAATATCTTTAAGA GACAAAATCGACTATTTTAGATCAACCAAAAAAAATTTTATATTCCCATCTTTCTCAACT ATATCAGCTATAGGCCCCAATTCTGCTGTTATTCATTATGAATCGACAGAAGATACTAAT GCTAAAATAACACCAAATATTTATTTACTAGATTCTGGAGGACAATATTTACATGGAACA ACAGACGTAACAAGAACAACCCATTTTGGTGAGCCAACTCCTGAAGAAAAAAAATTATAT ACCTTAGTTTTAAAAGGCCATTTAAGTTTAAGAAAAGTTATCTTTGCTAGTTATACCAAT TCAATGGCTTTAGATTTCTTAGCACGCCAACCATTATTCAATAATTTTCTAGATTATAAT CACGGAACTGGTCATGGCGTTGGTACATGCTTAAATGTACATGAAGGTGGATGTTCTATT TCTCCAGCTACTGGAACACCATTAAAAGAAAATATGGTACTTTCTAATGAGCCAGGTTAT TATTGGGCAGACCATTTTGGTATTAGAATCGAAAACATGCAATATGTAGTCACTAAAAAA CAAACGAATGACGCTAAATTTTTAACTTTTAATGATTTAACCCTTTACCCATATGAAAAA AAATTATTAGACTATTATCTATTAACCCCTGAAGAAATTGCAGATATTAACGAATACCAC CAAACTATTAGAAACACTTTATTACCAAGAATTAAGGAAAATCCATCAGACTATGCTAAA GGAATAGATCAATATTTGATGGATATAACCGAACCAATTCACACTAAGTAG
  • Download Fasta

  • Fasta :-

    MRINSLIYANLLLTAIHANFFSKGNKANYVSAYINSFHHINNNNNNDNKINIEDNNKIND TNTGKRQDQLNNFFTRRFYTFHNKNQYLREEKRNSKEVNLTNNNTNSYNMESSNEQNNQM MGGDSYKERLQNLKKYMAEHNIDVYIIINSDAHNSEIINDQDKKIYYLTNYSGADGILIL TKDAQIIYVNALYELQANKELDTKFFTLKVGRITNRDEIFQTIADLKFNTIAFDGKNTSV SFYEKLKDKIKIQFPDKKIQEKFIYKNSINQVVKDNNINLYVLESPLVTVPNSDVNKKPI FIYSREFGGSCAAQKIQESFDFFIENPDVDSLLLSELDEIAYLLNLRGYDYKYSPLFYSY VYLKYNRDKGIIDDIILFTKVENVQKNVLAHLERIHVKLMDYDSVVSYLTNNVSSKSENT KNNNGKNIILGSVHENRSPRYDISLSPHINLMIYMLFNKEKVLLKKSPIADMKAVKNYVE IDSIKEAHVLDGLALLQFFHWCEEKRKTKELFKETEISLRDKIDYFRSTKKNFIFPSFST ISAIGPNSAVIHYESTEDTNAKITPNIYLLDSGGQYLHGTTDVTRTTHFGEPTPEEKKLY TLVLKGHLSLRKVIFASYTNSMALDFLARQPLFNNFLDYNHGTGHGVGTCLNVHEGGCSI SPATGTPLKENMVLSNEPGYYWADHFGIRIENMQYVVTKKQTNDAKFLTFNDLTLYPYEK KLLDYYLLTPEEIADINEYHQTIRNTLLPRIKENPSDYAKGIDQYLMDITEPIHTK

  • title: active site
  • coordinates: H552,D571,D582,T649,E677,E691
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1318100415 SNNVSSKSEN0.994unspPBANKA_1318100415 SNNVSSKSEN0.994unspPBANKA_1318100415 SNNVSSKSEN0.994unspPBANKA_1318100483 SVEIDSIKEA0.993unspPBANKA_1318100518 SETEISLRDK0.99unspPBANKA_1318100555 SIHYESTEDT0.995unspPBANKA_131810095 SEKRNSKEVN0.996unspPBANKA_1318100125 SMGGDSYKER0.995unsp

PBANKA_131810      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India