PBANKA_1321700 | berghepain-1

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1321700OTHER0.9994730.0000160.000511
No Results

  • Fasta :-

    >PBANKA_1321700 MINDIRRINITTSSIESLNENSKYLKRNHKRTIKICAYAITTFALFFIVVVYFKNQTNVN DANRNTLAAIDETSLMNKEIAYLREILKKYKTKTNENNEYAYEKNDDINGDGEDEHELLL MLHKFLKNKGNPNKIDRFDINNNDSNKNRGNENIDQINILSQKLESMHDNIKYASKFFKY MKEYNKKYKNIDEQLVRFENFKTNYMKVKKHNEMVGKNGITYVQKVNQFSDFSKEELDSY FKKLLPIPHNLKTKHVVPLKTHLDDNKIKPKEGVLDYPEQRDYREWNILLPPKDQGMCGS CWAFASVGNYEALFAKKYSILPISFSEQQVVDCSSDNFGCDGGHPFLSFLYFLNNGVCFG DNYEYKAHDDFFCLSYRCAYRSKLKKIGNAYPYELIMSLNEVGPITVNVGVSDEFVLYSG GIFDGTCASELNHSVLLVGYGKVKRSLVFEDSHTNVDSNLIKNYKENIKDSDDDYLYYWI IRNSWSSTWGEGGYIRIKRNKLGDDVFCGIGIDVFFPIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1321700.fa Sequence name : PBANKA_1321700 Sequence length : 519 VALUES OF COMPUTED PARAMETERS Coef20 : 4.353 CoefTot : -0.134 ChDiff : 1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.324 2.559 0.531 0.854 MesoH : -0.219 0.353 -0.262 0.259 MuHd_075 : 14.675 11.670 4.047 4.310 MuHd_095 : 9.644 2.655 1.342 2.555 MuHd_100 : 17.513 13.114 4.164 5.551 MuHd_105 : 31.338 23.608 8.181 8.363 Hmax_075 : 9.917 12.950 1.099 4.527 Hmax_095 : -0.875 7.700 -1.685 3.150 Hmax_100 : 5.900 10.500 0.580 3.840 Hmax_105 : 12.200 15.700 1.949 5.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9721 0.0279 DFMC : 0.9853 0.0147
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 519 PBANKA_1321700 MINDIRRINITTSSIESLNENSKYLKRNHKRTIKICAYAITTFALFFIVVVYFKNQTNVNDANRNTLAAIDETSLMNKEI 80 AYLREILKKYKTKTNENNEYAYEKNDDINGDGEDEHELLLMLHKFLKNKGNPNKIDRFDINNNDSNKNRGNENIDQINIL 160 SQKLESMHDNIKYASKFFKYMKEYNKKYKNIDEQLVRFENFKTNYMKVKKHNEMVGKNGITYVQKVNQFSDFSKEELDSY 240 FKKLLPIPHNLKTKHVVPLKTHLDDNKIKPKEGVLDYPEQRDYREWNILLPPKDQGMCGSCWAFASVGNYEALFAKKYSI 320 LPISFSEQQVVDCSSDNFGCDGGHPFLSFLYFLNNGVCFGDNYEYKAHDDFFCLSYRCAYRSKLKKIGNAYPYELIMSLN 400 EVGPITVNVGVSDEFVLYSGGIFDGTCASELNHSVLLVGYGKVKRSLVFEDSHTNVDSNLIKNYKENIKDSDDDYLYYWI 480 IRNSWSSTWGEGGYIRIKRNKLGDDVFCGIGIDVFFPIL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1321700 6 -MINDIR|RI 0.078 . PBANKA_1321700 7 MINDIRR|IN 0.120 . PBANKA_1321700 23 SLNENSK|YL 0.067 . PBANKA_1321700 26 ENSKYLK|RN 0.062 . PBANKA_1321700 27 NSKYLKR|NH 0.130 . PBANKA_1321700 30 YLKRNHK|RT 0.121 . PBANKA_1321700 31 LKRNHKR|TI 0.242 . PBANKA_1321700 34 NHKRTIK|IC 0.126 . PBANKA_1321700 54 IVVVYFK|NQ 0.059 . PBANKA_1321700 64 NVNDANR|NT 0.098 . PBANKA_1321700 78 ETSLMNK|EI 0.065 . PBANKA_1321700 84 KEIAYLR|EI 0.087 . PBANKA_1321700 88 YLREILK|KY 0.060 . PBANKA_1321700 89 LREILKK|YK 0.119 . PBANKA_1321700 91 EILKKYK|TK 0.061 . PBANKA_1321700 93 LKKYKTK|TN 0.083 . PBANKA_1321700 104 NEYAYEK|ND 0.070 . PBANKA_1321700 124 LLLMLHK|FL 0.064 . PBANKA_1321700 127 MLHKFLK|NK 0.069 . PBANKA_1321700 129 HKFLKNK|GN 0.071 . PBANKA_1321700 134 NKGNPNK|ID 0.064 . PBANKA_1321700 137 NPNKIDR|FD 0.113 . PBANKA_1321700 147 NNNDSNK|NR 0.069 . PBANKA_1321700 149 NDSNKNR|GN 0.154 . PBANKA_1321700 163 INILSQK|LE 0.061 . PBANKA_1321700 172 SMHDNIK|YA 0.085 . PBANKA_1321700 176 NIKYASK|FF 0.064 . PBANKA_1321700 179 YASKFFK|YM 0.084 . PBANKA_1321700 182 KFFKYMK|EY 0.067 . PBANKA_1321700 186 YMKEYNK|KY 0.060 . PBANKA_1321700 187 MKEYNKK|YK 0.115 . PBANKA_1321700 189 EYNKKYK|NI 0.100 . PBANKA_1321700 197 IDEQLVR|FE 0.086 . PBANKA_1321700 202 VRFENFK|TN 0.066 . PBANKA_1321700 207 FKTNYMK|VK 0.069 . PBANKA_1321700 209 TNYMKVK|KH 0.074 . PBANKA_1321700 210 NYMKVKK|HN 0.140 . PBANKA_1321700 217 HNEMVGK|NG 0.068 . PBANKA_1321700 225 GITYVQK|VN 0.061 . PBANKA_1321700 234 QFSDFSK|EE 0.065 . PBANKA_1321700 242 ELDSYFK|KL 0.056 . PBANKA_1321700 243 LDSYFKK|LL 0.104 . PBANKA_1321700 252 PIPHNLK|TK 0.056 . PBANKA_1321700 254 PHNLKTK|HV 0.092 . PBANKA_1321700 260 KHVVPLK|TH 0.057 . PBANKA_1321700 267 THLDDNK|IK 0.060 . PBANKA_1321700 269 LDDNKIK|PK 0.085 . PBANKA_1321700 271 DNKIKPK|EG 0.060 . PBANKA_1321700 281 LDYPEQR|DY 0.094 . PBANKA_1321700 284 PEQRDYR|EW 0.238 . PBANKA_1321700 293 NILLPPK|DQ 0.075 . PBANKA_1321700 316 YEALFAK|KY 0.072 . PBANKA_1321700 317 EALFAKK|YS 0.080 . PBANKA_1321700 366 GDNYEYK|AH 0.079 . PBANKA_1321700 377 FFCLSYR|CA 0.086 . PBANKA_1321700 381 SYRCAYR|SK 0.136 . PBANKA_1321700 383 RCAYRSK|LK 0.063 . PBANKA_1321700 385 AYRSKLK|KI 0.081 . PBANKA_1321700 386 YRSKLKK|IG 0.128 . PBANKA_1321700 442 LLVGYGK|VK 0.056 . PBANKA_1321700 444 VGYGKVK|RS 0.062 . PBANKA_1321700 445 GYGKVKR|SL 0.296 . PBANKA_1321700 462 VDSNLIK|NY 0.071 . PBANKA_1321700 465 NLIKNYK|EN 0.061 . PBANKA_1321700 469 NYKENIK|DS 0.065 . PBANKA_1321700 482 LYYWIIR|NS 0.080 . PBANKA_1321700 496 GEGGYIR|IK 0.090 . PBANKA_1321700 498 GGYIRIK|RN 0.060 . PBANKA_1321700 499 GYIRIKR|NK 0.367 . PBANKA_1321700 501 IRIKRNK|LG 0.083 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1321700 ATGATAAACGATATAAGACGAATAAACATTACCACAAGCAGTATCGAAAGTTTGAATGAA AATAGCAAATATTTAAAAAGAAATCACAAGAGGACTATAAAAATATGTGCATATGCAATT ACAACATTTGCATTATTTTTTATTGTTGTAGTATATTTTAAAAATCAAACAAATGTAAAT GATGCAAATAGAAATACTTTAGCAGCAATCGATGAAACAAGCTTAATGAATAAAGAAATA GCATATTTAAGAGAAATTTTGAAAAAATATAAAACAAAAACAAATGAAAATAATGAATAT GCATACGAAAAAAACGACGATATTAACGGAGATGGCGAAGACGAGCACGAATTGCTATTA ATGTTACATAAATTTTTAAAAAATAAAGGTAATCCTAATAAAATAGATAGGTTTGATATT AACAATAATGACTCAAATAAAAATCGTGGTAATGAAAATATTGATCAAATAAACATACTT AGTCAAAAACTTGAAAGCATGCATGATAACATAAAATATGCATCAAAATTTTTCAAATAT ATGAAAGAATACAATAAAAAATACAAAAATATAGATGAACAATTAGTAAGATTTGAAAAC TTTAAAACGAATTATATGAAAGTTAAAAAACACAATGAAATGGTAGGTAAAAATGGTATT ACATATGTACAAAAAGTAAACCAATTTAGTGATTTTTCTAAGGAAGAACTTGATAGTTAT TTTAAAAAATTATTACCTATTCCACACAATTTGAAAACTAAACATGTAGTACCACTAAAA ACACATTTAGACGATAATAAAATTAAACCAAAAGAAGGTGTATTAGACTATCCAGAACAG CGGGATTATAGAGAATGGAATATATTACTTCCTCCAAAGGATCAAGGTATGTGTGGGTCT TGCTGGGCATTTGCTAGTGTAGGAAATTATGAAGCTCTTTTTGCAAAAAAATATTCTATA TTACCTATAAGTTTTAGTGAACAACAAGTTGTTGATTGTTCTAGTGACAATTTTGGATGT GATGGCGGTCATCCATTTTTATCATTTTTATATTTTCTTAATAATGGGGTATGCTTTGGC GATAATTATGAATACAAAGCTCATGATGATTTTTTCTGCTTAAGTTATAGATGTGCGTAT AGAAGTAAATTAAAAAAAATTGGCAACGCATATCCATATGAATTAATTATGTCCTTAAAT GAAGTAGGGCCAATAACTGTTAATGTTGGTGTATCCGACGAATTTGTATTATATTCGGGT GGTATATTTGATGGAACATGTGCTTCGGAGTTAAATCATTCTGTTTTATTAGTGGGATAT GGTAAAGTTAAAAGGAGCTTAGTATTTGAGGATAGTCATACTAATGTAGATAGCAATTTG ATAAAAAACTATAAGGAAAATATCAAAGACAGCGATGATGACTATTTGTATTACTGGATC ATTAGAAATTCATGGAGTTCAACTTGGGGAGAAGGTGGCTATATAAGGATTAAAAGAAAC AAATTAGGAGACGATGTTTTTTGTGGAATTGGTATTGACGTTTTCTTTCCAATTTTATAA
  • Download Fasta

  • Fasta :-

    MINDIRRINITTSSIESLNENSKYLKRNHKRTIKICAYAITTFALFFIVVVYFKNQTNVN DANRNTLAAIDETSLMNKEIAYLREILKKYKTKTNENNEYAYEKNDDINGDGEDEHELLL MLHKFLKNKGNPNKIDRFDINNNDSNKNRGNENIDQINILSQKLESMHDNIKYASKFFKY MKEYNKKYKNIDEQLVRFENFKTNYMKVKKHNEMVGKNGITYVQKVNQFSDFSKEELDSY FKKLLPIPHNLKTKHVVPLKTHLDDNKIKPKEGVLDYPEQRDYREWNILLPPKDQGMCGS CWAFASVGNYEALFAKKYSILPISFSEQQVVDCSSDNFGCDGGHPFLSFLYFLNNGVCFG DNYEYKAHDDFFCLSYRCAYRSKLKKIGNAYPYELIMSLNEVGPITVNVGVSDEFVLYSG GIFDGTCASELNHSVLLVGYGKVKRSLVFEDSHTNVDSNLIKNYKENIKDSDDDYLYYWI IRNSWSSTWGEGGYIRIKRNKLGDDVFCGIGIDVFFPIL

  • title: active site
  • coordinates: Q295,C301,H433,N483
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1321700471 SNIKDSDDDY0.991unspPBANKA_1321700471 SNIKDSDDDY0.991unspPBANKA_1321700471 SNIKDSDDDY0.991unspPBANKA_1321700166 SQKLESMHDN0.996unspPBANKA_1321700233 SFSDFSKEEL0.995unsp

PBANKA_132170      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India