PBANKA_1350800 | mitochondrial intermediate peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0005739      

  • Curated_GO_Components:  mitochondrion      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1350800OTHER0.9981780.0007790.001043
No Results

  • Fasta :-

    >PBANKA_1350800 MQVSIMENSIYYLKRAGKISIREKIRRGICIDRKVLVNKFIEDKHSTKLNILDNINFKNV LNKIEVSSARLNIKGNNRNIFKDKKCYISGNYNFEQTLTCVDKLKNSDIEYIDGVLKKVN KINNKDEDDEGFILELKGISNNGENILEFTNMCIKICKKLLQNIFKESNIYIIVNIIDTV SNNLCKLGDALELLRNLHNNNNVILKAHEGLEKLTNFIDEINIDEKIYNFLKQKYNDNIN ILNYEHKEVLENMIQSMENQGVHIKEKERKKEYLELQAQEKYFSFHASSNFSTNLEGIYI EKNKLLPYIDKNTLIEYENKIKPLYKNNKIKKSYFYPTSDYIYILQDSSFLLTLLENIPE QNLREKIYNLFKKTNKDFQNNILVLQYYRNMLIIYRNFKNYNEYALKNCILNSPDKVLYF LEKVFRKILPLFFEELKFIESYIQFCENKNHNNIFSKNLNIPNEEYSQDIKNEKYDLKKN YDKTGLSSECKDGNNNVSLVTPENIFYYINKIKMEKLKKIEDKLNEHLTLYDVLSFVIKI LKKCYLLDMISVIPTKGELWDEHILKFEIKKHNHIYGYIYMDLFERENKNQAIAQYTVRC SKNMNICLKYKWFDENSEISIPFFYTGIIKSEISNNMSTDFEQNDKDISKNEKTNLYRQT TSTFLVCNFKADLDKNKNVEKKSRPNENRKCNLVSDKIKIFLENIKMTLEKVNLFLHEFG HTLHCILSSTYLQHLSGNRSGADFSEFSSHLFEEYLNSYEALSLLYSQKKDENEIKNMVE NYVKNKNIICYYPIVQLVIQSIVDHIFYSLSHNSNNMNERKQLIENEIKTYFLGLYYKNI FILDFFPHIHFSKTTHLIHYPSNYYCYLYCSILAKYIWNRTFKNDLYNLDSSSRIVKFLE GGSVNSSLRNIISLVETDKEKIDYYTENPHHIPLDDFFEYYQEGDKQKKYDSFFCSIIPS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1350800.fa Sequence name : PBANKA_1350800 Sequence length : 960 VALUES OF COMPUTED PARAMETERS Coef20 : 4.031 CoefTot : -0.443 ChDiff : 8 ZoneTo : 22 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.524 0.146 0.569 MesoH : -0.657 0.258 -0.458 0.209 MuHd_075 : 20.429 15.581 6.339 4.393 MuHd_095 : 49.356 23.888 12.586 9.323 MuHd_100 : 52.216 25.178 13.246 9.651 MuHd_105 : 43.524 26.105 11.284 8.356 Hmax_075 : 1.662 9.275 0.054 2.920 Hmax_095 : 15.488 15.050 3.145 5.303 Hmax_100 : 14.600 12.700 2.623 4.660 Hmax_105 : 14.583 14.600 2.480 5.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5787 0.4213 DFMC : 0.7966 0.2034
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 960 PBANKA_1350800 MQVSIMENSIYYLKRAGKISIREKIRRGICIDRKVLVNKFIEDKHSTKLNILDNINFKNVLNKIEVSSARLNIKGNNRNI 80 FKDKKCYISGNYNFEQTLTCVDKLKNSDIEYIDGVLKKVNKINNKDEDDEGFILELKGISNNGENILEFTNMCIKICKKL 160 LQNIFKESNIYIIVNIIDTVSNNLCKLGDALELLRNLHNNNNVILKAHEGLEKLTNFIDEINIDEKIYNFLKQKYNDNIN 240 ILNYEHKEVLENMIQSMENQGVHIKEKERKKEYLELQAQEKYFSFHASSNFSTNLEGIYIEKNKLLPYIDKNTLIEYENK 320 IKPLYKNNKIKKSYFYPTSDYIYILQDSSFLLTLLENIPEQNLREKIYNLFKKTNKDFQNNILVLQYYRNMLIIYRNFKN 400 YNEYALKNCILNSPDKVLYFLEKVFRKILPLFFEELKFIESYIQFCENKNHNNIFSKNLNIPNEEYSQDIKNEKYDLKKN 480 YDKTGLSSECKDGNNNVSLVTPENIFYYINKIKMEKLKKIEDKLNEHLTLYDVLSFVIKILKKCYLLDMISVIPTKGELW 560 DEHILKFEIKKHNHIYGYIYMDLFERENKNQAIAQYTVRCSKNMNICLKYKWFDENSEISIPFFYTGIIKSEISNNMSTD 640 FEQNDKDISKNEKTNLYRQTTSTFLVCNFKADLDKNKNVEKKSRPNENRKCNLVSDKIKIFLENIKMTLEKVNLFLHEFG 720 HTLHCILSSTYLQHLSGNRSGADFSEFSSHLFEEYLNSYEALSLLYSQKKDENEIKNMVENYVKNKNIICYYPIVQLVIQ 800 SIVDHIFYSLSHNSNNMNERKQLIENEIKTYFLGLYYKNIFILDFFPHIHFSKTTHLIHYPSNYYCYLYCSILAKYIWNR 880 TFKNDLYNLDSSSRIVKFLEGGSVNSSLRNIISLVETDKEKIDYYTENPHHIPLDDFFEYYQEGDKQKKYDSFFCSIIPS 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1350800 14 NSIYYLK|RA 0.065 . PBANKA_1350800 15 SIYYLKR|AG 0.213 . PBANKA_1350800 18 YLKRAGK|IS 0.105 . PBANKA_1350800 22 AGKISIR|EK 0.079 . PBANKA_1350800 24 KISIREK|IR 0.064 . PBANKA_1350800 26 SIREKIR|RG 0.088 . PBANKA_1350800 27 IREKIRR|GI 0.237 . PBANKA_1350800 33 RGICIDR|KV 0.090 . PBANKA_1350800 34 GICIDRK|VL 0.068 . PBANKA_1350800 39 RKVLVNK|FI 0.106 . PBANKA_1350800 44 NKFIEDK|HS 0.060 . PBANKA_1350800 48 EDKHSTK|LN 0.060 . PBANKA_1350800 58 LDNINFK|NV 0.074 . PBANKA_1350800 63 FKNVLNK|IE 0.060 . PBANKA_1350800 70 IEVSSAR|LN 0.100 . PBANKA_1350800 74 SARLNIK|GN 0.069 . PBANKA_1350800 78 NIKGNNR|NI 0.087 . PBANKA_1350800 82 NNRNIFK|DK 0.073 . PBANKA_1350800 84 RNIFKDK|KC 0.075 . PBANKA_1350800 85 NIFKDKK|CY 0.096 . PBANKA_1350800 103 TLTCVDK|LK 0.063 . PBANKA_1350800 105 TCVDKLK|NS 0.068 . PBANKA_1350800 117 YIDGVLK|KV 0.066 . PBANKA_1350800 118 IDGVLKK|VN 0.099 . PBANKA_1350800 121 VLKKVNK|IN 0.070 . PBANKA_1350800 125 VNKINNK|DE 0.077 . PBANKA_1350800 137 GFILELK|GI 0.067 . PBANKA_1350800 155 FTNMCIK|IC 0.059 . PBANKA_1350800 158 MCIKICK|KL 0.065 . PBANKA_1350800 159 CIKICKK|LL 0.088 . PBANKA_1350800 166 LLQNIFK|ES 0.065 . PBANKA_1350800 186 VSNNLCK|LG 0.067 . PBANKA_1350800 195 DALELLR|NL 0.069 . PBANKA_1350800 206 NNNVILK|AH 0.077 . PBANKA_1350800 213 AHEGLEK|LT 0.060 . PBANKA_1350800 226 EINIDEK|IY 0.057 . PBANKA_1350800 232 KIYNFLK|QK 0.059 . PBANKA_1350800 234 YNFLKQK|YN 0.068 . PBANKA_1350800 247 ILNYEHK|EV 0.085 . PBANKA_1350800 265 NQGVHIK|EK 0.067 . PBANKA_1350800 267 GVHIKEK|ER 0.064 . PBANKA_1350800 269 HIKEKER|KK 0.096 . PBANKA_1350800 270 IKEKERK|KE 0.084 . PBANKA_1350800 271 KEKERKK|EY 0.100 . PBANKA_1350800 281 ELQAQEK|YF 0.069 . PBANKA_1350800 302 EGIYIEK|NK 0.051 . PBANKA_1350800 304 IYIEKNK|LL 0.065 . PBANKA_1350800 311 LLPYIDK|NT 0.059 . PBANKA_1350800 320 LIEYENK|IK 0.056 . PBANKA_1350800 322 EYENKIK|PL 0.065 . PBANKA_1350800 326 KIKPLYK|NN 0.064 . PBANKA_1350800 329 PLYKNNK|IK 0.059 . PBANKA_1350800 331 YKNNKIK|KS 0.077 . PBANKA_1350800 332 KNNKIKK|SY 0.184 . PBANKA_1350800 364 IPEQNLR|EK 0.083 . PBANKA_1350800 366 EQNLREK|IY 0.064 . PBANKA_1350800 372 KIYNLFK|KT 0.061 . PBANKA_1350800 373 IYNLFKK|TN 0.128 . PBANKA_1350800 376 LFKKTNK|DF 0.067 . PBANKA_1350800 389 LVLQYYR|NM 0.069 . PBANKA_1350800 396 NMLIIYR|NF 0.067 . PBANKA_1350800 399 IIYRNFK|NY 0.094 . PBANKA_1350800 407 YNEYALK|NC 0.055 . PBANKA_1350800 416 ILNSPDK|VL 0.065 . PBANKA_1350800 423 VLYFLEK|VF 0.070 . PBANKA_1350800 426 FLEKVFR|KI 0.090 . PBANKA_1350800 427 LEKVFRK|IL 0.077 . PBANKA_1350800 437 LFFEELK|FI 0.065 . PBANKA_1350800 449 IQFCENK|NH 0.060 . PBANKA_1350800 457 HNNIFSK|NL 0.069 . PBANKA_1350800 471 EYSQDIK|NE 0.056 . PBANKA_1350800 474 QDIKNEK|YD 0.061 . PBANKA_1350800 478 NEKYDLK|KN 0.065 . PBANKA_1350800 479 EKYDLKK|NY 0.107 . PBANKA_1350800 483 LKKNYDK|TG 0.059 . PBANKA_1350800 491 GLSSECK|DG 0.073 . PBANKA_1350800 511 IFYYINK|IK 0.069 . PBANKA_1350800 513 YYINKIK|ME 0.057 . PBANKA_1350800 516 NKIKMEK|LK 0.058 . PBANKA_1350800 518 IKMEKLK|KI 0.103 . PBANKA_1350800 519 KMEKLKK|IE 0.093 . PBANKA_1350800 523 LKKIEDK|LN 0.070 . PBANKA_1350800 539 VLSFVIK|IL 0.067 . PBANKA_1350800 542 FVIKILK|KC 0.053 . PBANKA_1350800 543 VIKILKK|CY 0.072 . PBANKA_1350800 556 ISVIPTK|GE 0.067 . PBANKA_1350800 566 WDEHILK|FE 0.072 . PBANKA_1350800 570 ILKFEIK|KH 0.068 . PBANKA_1350800 571 LKFEIKK|HN 0.109 . PBANKA_1350800 586 YMDLFER|EN 0.069 . PBANKA_1350800 589 LFERENK|NQ 0.114 . PBANKA_1350800 599 IAQYTVR|CS 0.082 . PBANKA_1350800 602 YTVRCSK|NM 0.100 . PBANKA_1350800 609 NMNICLK|YK 0.074 . PBANKA_1350800 611 NICLKYK|WF 0.067 . PBANKA_1350800 630 FYTGIIK|SE 0.064 . PBANKA_1350800 646 DFEQNDK|DI 0.085 . PBANKA_1350800 650 NDKDISK|NE 0.059 . PBANKA_1350800 653 DISKNEK|TN 0.064 . PBANKA_1350800 658 EKTNLYR|QT 0.082 . PBANKA_1350800 670 FLVCNFK|AD 0.060 . PBANKA_1350800 675 FKADLDK|NK 0.062 . PBANKA_1350800 677 ADLDKNK|NV 0.079 . PBANKA_1350800 681 KNKNVEK|KS 0.072 . PBANKA_1350800 682 NKNVEKK|SR 0.151 . PBANKA_1350800 684 NVEKKSR|PN 0.096 . PBANKA_1350800 689 SRPNENR|KC 0.089 . PBANKA_1350800 690 RPNENRK|CN 0.087 . PBANKA_1350800 697 CNLVSDK|IK 0.062 . PBANKA_1350800 699 LVSDKIK|IF 0.079 . PBANKA_1350800 706 IFLENIK|MT 0.060 . PBANKA_1350800 711 IKMTLEK|VN 0.055 . PBANKA_1350800 739 QHLSGNR|SG 0.075 . PBANKA_1350800 769 SLLYSQK|KD 0.070 . PBANKA_1350800 770 LLYSQKK|DE 0.129 . PBANKA_1350800 776 KDENEIK|NM 0.057 . PBANKA_1350800 784 MVENYVK|NK 0.056 . PBANKA_1350800 786 ENYVKNK|NI 0.072 . PBANKA_1350800 820 SNNMNER|KQ 0.088 . PBANKA_1350800 821 NNMNERK|QL 0.102 . PBANKA_1350800 829 LIENEIK|TY 0.061 . PBANKA_1350800 838 FLGLYYK|NI 0.060 . PBANKA_1350800 853 PHIHFSK|TT 0.064 . PBANKA_1350800 875 YCSILAK|YI 0.076 . PBANKA_1350800 880 AKYIWNR|TF 0.084 . PBANKA_1350800 883 IWNRTFK|ND 0.139 . PBANKA_1350800 894 NLDSSSR|IV 0.102 . PBANKA_1350800 897 SSSRIVK|FL 0.284 . PBANKA_1350800 909 SVNSSLR|NI 0.097 . PBANKA_1350800 919 SLVETDK|EK 0.061 . PBANKA_1350800 921 VETDKEK|ID 0.059 . PBANKA_1350800 946 YYQEGDK|QK 0.051 . PBANKA_1350800 948 QEGDKQK|KY 0.072 . PBANKA_1350800 949 EGDKQKK|YD 0.091 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1350800 ATGCAAGTGTCTATAATGGAAAATTCAATCTATTACTTAAAACGAGCAGGAAAAATATCA ATTCGTGAAAAAATAAGGAGAGGAATTTGTATTGATAGGAAAGTATTAGTTAACAAGTTT ATTGAAGATAAACATAGTACTAAATTAAATATATTAGATAATATAAATTTTAAGAATGTT TTAAATAAAATTGAAGTTAGTAGTGCTAGGTTAAATATAAAGGGAAATAACAGGAATATT TTTAAAGATAAAAAGTGTTACATTAGTGGAAATTATAACTTTGAACAAACCTTAACATGC GTAGACAAATTAAAAAATAGTGACATTGAATATATCGATGGTGTTTTAAAAAAAGTGAAC AAAATAAATAATAAAGATGAAGATGATGAAGGGTTTATTCTCGAATTAAAAGGAATATCT AATAATGGTGAAAATATTTTAGAATTTACTAATATGTGTATAAAAATATGTAAAAAATTA TTGCAAAATATATTTAAGGAAAGTAATATATATATAATTGTAAATATAATAGATACCGTT TCAAATAATCTTTGTAAATTAGGTGATGCTTTAGAACTGTTAAGAAATTTACACAACAAT AATAATGTAATTTTAAAAGCTCATGAAGGTTTAGAAAAATTAACTAATTTTATTGATGAA ATAAATATTGATGAAAAAATTTATAATTTTTTAAAACAAAAATATAATGATAATATAAAT ATATTAAATTATGAGCATAAAGAAGTTTTAGAAAATATGATTCAATCTATGGAAAATCAG GGTGTACATATTAAAGAAAAGGAGAGGAAAAAAGAATATTTAGAATTACAAGCCCAAGAA AAATATTTTTCATTTCATGCATCTTCTAATTTTTCTACCAATTTGGAAGGAATTTATATT GAAAAAAATAAACTACTACCATATATAGATAAGAATACATTAATTGAATATGAAAATAAA ATTAAACCTTTATATAAAAATAATAAAATAAAAAAAAGCTATTTCTATCCTACTAGTGAT TATATATATATTTTACAAGATAGTTCTTTTTTATTAACACTTTTGGAAAATATTCCTGAA CAAAATTTAAGAGAAAAAATTTATAATTTATTTAAAAAGACAAATAAAGATTTTCAAAAC AATATTTTAGTTTTACAATATTATAGAAATATGTTAATTATTTATAGAAATTTTAAAAAC TACAATGAATATGCATTAAAAAATTGTATATTAAATTCTCCTGATAAAGTTTTATATTTT TTAGAAAAGGTTTTTAGAAAAATATTGCCACTTTTTTTTGAAGAATTAAAGTTCATAGAA AGCTATATTCAATTTTGTGAAAATAAAAATCACAATAATATATTCTCCAAAAATTTGAAC ATACCAAATGAGGAATATTCCCAAGATATAAAAAATGAAAAATATGATTTAAAAAAAAAT TATGATAAAACAGGATTAAGTAGTGAATGTAAAGATGGTAATAATAATGTATCTTTGGTA ACTCCAGAAAATATTTTTTATTATATTAATAAAATAAAAATGGAAAAATTAAAAAAAATT GAAGACAAGTTAAATGAGCATTTAACTCTATATGATGTTTTAAGCTTTGTCATAAAAATT TTAAAAAAATGTTATTTGTTAGATATGATAAGTGTAATTCCAACAAAAGGGGAATTATGG GATGAACATATTTTAAAATTCGAAATTAAAAAACATAATCATATTTATGGTTATATATAT ATGGATTTATTTGAAAGGGAAAATAAAAATCAAGCAATAGCACAATATACAGTTAGATGT TCAAAAAATATGAACATTTGTTTGAAATATAAATGGTTTGATGAAAATAGTGAAATTAGT ATTCCATTTTTTTATACAGGTATTATTAAAAGTGAGATAAGTAATAATATGTCTACTGAT TTTGAACAAAATGATAAGGATATTTCAAAAAATGAGAAAACAAATTTGTATAGACAAACT ACATCCACTTTTTTAGTTTGCAATTTTAAAGCCGATCTTGATAAAAATAAAAATGTAGAG AAAAAAAGTAGACCCAATGAAAATAGAAAATGTAATTTGGTTTCTGATAAAATTAAAATT TTTTTAGAAAATATTAAAATGACTTTAGAAAAAGTTAATCTTTTTCTTCACGAATTTGGG CATACATTACATTGTATATTAAGTTCAACATATTTACAACATTTATCAGGTAATAGAAGT GGAGCAGATTTTTCCGAATTTTCTTCTCATTTATTTGAGGAATATTTAAATAGCTATGAA GCATTATCTTTGTTATATTCACAAAAAAAAGATGAAAATGAAATAAAAAATATGGTAGAA AATTATGTTAAAAATAAAAATATTATATGTTATTACCCAATTGTCCAACTTGTTATACAA TCTATTGTTGACCATATATTTTATTCTTTATCTCATAATTCAAATAATATGAATGAAAGA AAGCAATTAATTGAGAATGAAATAAAAACATATTTTTTAGGGCTATACTATAAAAATATT TTTATATTAGATTTTTTTCCACATATCCATTTTTCAAAAACAACACATTTAATTCATTAC CCTTCAAATTATTATTGTTATTTGTATTGCTCTATATTGGCAAAGTATATATGGAACCGA ACCTTTAAAAATGACCTATATAACTTAGATAGTTCGTCTCGCATAGTCAAATTTCTAGAG GGGGGTTCTGTCAATTCGAGCTTGCGAAATATCATATCTTTAGTCGAAACAGATAAGGAA AAAATCGATTATTACACGGAAAACCCTCACCATATTCCGTTGGACGATTTTTTTGAATAT TACCAAGAAGGAGATAAACAAAAGAAATATGATTCATTTTTTTGTTCAATCATACCATCA TGA
  • Download Fasta

  • Fasta :-

    MQVSIMENSIYYLKRAGKISIREKIRRGICIDRKVLVNKFIEDKHSTKLNILDNINFKNV LNKIEVSSARLNIKGNNRNIFKDKKCYISGNYNFEQTLTCVDKLKNSDIEYIDGVLKKVN KINNKDEDDEGFILELKGISNNGENILEFTNMCIKICKKLLQNIFKESNIYIIVNIIDTV SNNLCKLGDALELLRNLHNNNNVILKAHEGLEKLTNFIDEINIDEKIYNFLKQKYNDNIN ILNYEHKEVLENMIQSMENQGVHIKEKERKKEYLELQAQEKYFSFHASSNFSTNLEGIYI EKNKLLPYIDKNTLIEYENKIKPLYKNNKIKKSYFYPTSDYIYILQDSSFLLTLLENIPE QNLREKIYNLFKKTNKDFQNNILVLQYYRNMLIIYRNFKNYNEYALKNCILNSPDKVLYF LEKVFRKILPLFFEELKFIESYIQFCENKNHNNIFSKNLNIPNEEYSQDIKNEKYDLKKN YDKTGLSSECKDGNNNVSLVTPENIFYYINKIKMEKLKKIEDKLNEHLTLYDVLSFVIKI LKKCYLLDMISVIPTKGELWDEHILKFEIKKHNHIYGYIYMDLFERENKNQAIAQYTVRC SKNMNICLKYKWFDENSEISIPFFYTGIIKSEISNNMSTDFEQNDKDISKNEKTNLYRQT TSTFLVCNFKADLDKNKNVEKKSRPNENRKCNLVSDKIKIFLENIKMTLEKVNLFLHEFG HTLHCILSSTYLQHLSGNRSGADFSEFSSHLFEEYLNSYEALSLLYSQKKDENEIKNMVE NYVKNKNIICYYPIVQLVIQSIVDHIFYSLSHNSNNMNERKQLIENEIKTYFLGLYYKNI FILDFFPHIHFSKTTHLIHYPSNYYCYLYCSILAKYIWNRTFKNDLYNLDSSSRIVKFLE GGSVNSSLRNIISLVETDKEKIDYYTENPHHIPLDDFFEYYQEGDKQKKYDSFFCSIIPS

  • title: Zn binding site
  • coordinates: H717,H721,E746
No Results
No Results
IDSitePeptideScoreMethod
PBANKA_135080046 SEDKHSTKLN0.993unsp

PBANKA_135080      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India