PBANKA_1362500 | peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1362500OTHER0.9999570.0000290.000014
No Results

  • Fasta :-

    >PBANKA_1362500 MNFDFSLQSCCDKNQNTTYIAILCCILVNIICWKCKILEPFKLLTVFLHEFSHASACWIT GGKVKGIEVNRDHGGCTNTVGGNMFLILPAGYIGSCFYGMFFILMAYINKWTLLSSAVFL SFLLLIVLTFYAKNFFLRFLCILFLGIIIGAWGIGVSFNESKYWPLKVIMTFMGVLNEMY SMVDIFDDLITRTTPESDAYKYAKLTKCNSKFCGVLWCVINLGFIILTMYLIGAIHVKPF EN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1362500.fa Sequence name : PBANKA_1362500 Sequence length : 242 VALUES OF COMPUTED PARAMETERS Coef20 : 3.769 CoefTot : -0.134 ChDiff : 4 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.400 2.576 0.571 0.961 MesoH : 1.525 1.710 0.190 0.671 MuHd_075 : 18.724 10.619 7.034 2.551 MuHd_095 : 20.186 11.041 7.281 2.675 MuHd_100 : 17.472 11.966 7.094 2.776 MuHd_105 : 13.594 12.012 6.111 2.589 Hmax_075 : 8.867 6.300 2.616 1.622 Hmax_095 : 2.975 3.900 0.777 1.200 Hmax_100 : 8.100 6.700 2.508 2.000 Hmax_105 : 1.750 4.317 0.288 1.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9138 0.0862 DFMC : 0.8703 0.1297
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 242 PBANKA_1362500 MNFDFSLQSCCDKNQNTTYIAILCCILVNIICWKCKILEPFKLLTVFLHEFSHASACWITGGKVKGIEVNRDHGGCTNTV 80 GGNMFLILPAGYIGSCFYGMFFILMAYINKWTLLSSAVFLSFLLLIVLTFYAKNFFLRFLCILFLGIIIGAWGIGVSFNE 160 SKYWPLKVIMTFMGVLNEMYSMVDIFDDLITRTTPESDAYKYAKLTKCNSKFCGVLWCVINLGFIILTMYLIGAIHVKPF 240 EN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1362500 13 LQSCCDK|NQ 0.064 . PBANKA_1362500 34 VNIICWK|CK 0.060 . PBANKA_1362500 36 IICWKCK|IL 0.073 . PBANKA_1362500 42 KILEPFK|LL 0.061 . PBANKA_1362500 63 CWITGGK|VK 0.058 . PBANKA_1362500 65 ITGGKVK|GI 0.090 . PBANKA_1362500 71 KGIEVNR|DH 0.133 . PBANKA_1362500 110 LMAYINK|WT 0.058 . PBANKA_1362500 133 VLTFYAK|NF 0.055 . PBANKA_1362500 138 AKNFFLR|FL 0.138 . PBANKA_1362500 162 VSFNESK|YW 0.068 . PBANKA_1362500 167 SKYWPLK|VI 0.070 . PBANKA_1362500 192 FDDLITR|TT 0.066 . PBANKA_1362500 201 PESDAYK|YA 0.070 . PBANKA_1362500 204 DAYKYAK|LT 0.062 . PBANKA_1362500 207 KYAKLTK|CN 0.070 . PBANKA_1362500 211 LTKCNSK|FC 0.072 . PBANKA_1362500 238 IGAIHVK|PF 0.075 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1362500 ATGAATTTTGATTTTAGTTTGCAATCTTGTTGTGACAAAAATCAAAATACAACATATATA GCTATTTTATGTTGTATATTAGTAAATATAATATGCTGGAAATGTAAAATTTTAGAGCCA TTTAAATTGTTGACTGTTTTTTTGCATGAATTTTCTCATGCATCCGCTTGTTGGATAACC GGAGGCAAGGTGAAAGGGATAGAGGTAAATAGAGATCATGGAGGTTGCACAAATACAGTA GGTGGAAATATGTTTTTAATTCTTCCAGCAGGATATATTGGGTCATGTTTTTATGGAATG TTTTTTATTTTAATGGCATATATTAACAAATGGACCTTATTATCATCAGCTGTATTTTTA TCTTTTTTATTATTAATTGTATTAACATTTTATGCAAAAAATTTTTTTTTACGATTTCTT TGTATTTTATTTTTGGGTATAATAATAGGAGCATGGGGAATTGGTGTATCTTTTAACGAA TCAAAATATTGGCCTTTAAAAGTGATAATGACTTTTATGGGGGTATTAAATGAAATGTAT AGCATGGTTGATATTTTTGATGATTTAATTACAAGAACAACACCAGAATCTGATGCTTAT AAATATGCAAAATTAACAAAATGCAATTCTAAATTTTGTGGAGTTTTATGGTGTGTGATT AATTTAGGTTTTATTATTTTGACAATGTATTTAATAGGTGCTATTCATGTAAAGCCATTT GAAAACTAA
  • Download Fasta

  • Fasta :-

    MNFDFSLQSCCDKNQNTTYIAILCCILVNIICWKCKILEPFKLLTVFLHEFSHASACWIT GGKVKGIEVNRDHGGCTNTVGGNMFLILPAGYIGSCFYGMFFILMAYINKWTLLSSAVFL SFLLLIVLTFYAKNFFLRFLCILFLGIIIGAWGIGVSFNESKYWPLKVIMTFMGVLNEMY SMVDIFDDLITRTTPESDAYKYAKLTKCNSKFCGVLWCVINLGFIILTMYLIGAIHVKPF EN

    No Results
    No Results
No Results
No Results
No Results

PBANKA_136250      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India