PBANKA_1417600 | ubiquitin carboxyl-terminal hydrolase MINDY, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1417600OTHER0.9999690.0000140.000017
No Results

  • Fasta :-

    >PBANKA_1417600 MSSWLKHNYDGNSDEEENIIVRFADYETFKSYVLNKYDKTNKLHNYQTDNIYFYTVKWIT FINRKVPILLQNKNGACPLLCIANILLLRNQLHIDKKIKKISQKVLEDKIISILLESNKK NVTNNSASCNYRKNIIECIDILPQLKYGLDVNCKFTDIQSFEYTKGLCIFDMLNIPLYHG WVISADDKIFYPYLKDYSYNVIINKVIKYNEYYEKKRKSASKEESSNERLLIISQALNLD FESDDGGNCSAPKKIEEKDNIHINDMILSKVDSNTDKKLEFETCEHINTMPIENSNSSFS IKSYSNTNAKIIKSQSSSIPIFPDDLDKNFEDNFKTNMPQNSVLNLGNYNVGHDPWEDKS KTDFNRRFYNANRNSYNNEIGIINNNYNMSNNKNNVNKNNINNNNDSSSGKKNAIIPIFL KKDKKNNKCDTIETNNPEWINKAGDVLKKKKESLTLLFSSPLHKKIEKKDKEVINDYENA KVENIKKDNKNGRIKHPLKIEYFNEENKINTPKFPDDIISANENFKTNSFSFKSDILDTS VNNINANYEIFEKGDKIKNSNSKVDSENIIDNDNKYKEHIIINNYNTNINLTPREFHEAL IILEFLEVYKTQLTLVGLKLLQENLNPNQLVAFFRNNHFNTLFKYNNKLFLLIGDISFLH LRCTWELFDSVSNDTIYCDNNFKCITSENMSNLFNQHISILNSFENMSNLKANMQSINAY SSYLHSKKKKKKCTFM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1417600.fa Sequence name : PBANKA_1417600 Sequence length : 736 VALUES OF COMPUTED PARAMETERS Coef20 : 2.891 CoefTot : -0.297 ChDiff : 8 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.847 1.400 0.049 0.607 MesoH : -0.723 0.359 -0.441 0.233 MuHd_075 : 8.826 9.570 3.387 2.617 MuHd_095 : 20.311 10.848 4.350 3.909 MuHd_100 : 19.345 10.361 4.363 3.677 MuHd_105 : 14.165 7.311 3.305 2.936 Hmax_075 : -10.967 -6.533 -5.889 0.362 Hmax_095 : -8.575 -6.737 -5.895 0.510 Hmax_100 : -6.300 -4.200 -4.295 0.730 Hmax_105 : -11.700 -6.900 -6.164 -0.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9505 0.0495 DFMC : 0.9595 0.0405
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 736 PBANKA_1417600 MSSWLKHNYDGNSDEEENIIVRFADYETFKSYVLNKYDKTNKLHNYQTDNIYFYTVKWITFINRKVPILLQNKNGACPLL 80 CIANILLLRNQLHIDKKIKKISQKVLEDKIISILLESNKKNVTNNSASCNYRKNIIECIDILPQLKYGLDVNCKFTDIQS 160 FEYTKGLCIFDMLNIPLYHGWVISADDKIFYPYLKDYSYNVIINKVIKYNEYYEKKRKSASKEESSNERLLIISQALNLD 240 FESDDGGNCSAPKKIEEKDNIHINDMILSKVDSNTDKKLEFETCEHINTMPIENSNSSFSIKSYSNTNAKIIKSQSSSIP 320 IFPDDLDKNFEDNFKTNMPQNSVLNLGNYNVGHDPWEDKSKTDFNRRFYNANRNSYNNEIGIINNNYNMSNNKNNVNKNN 400 INNNNDSSSGKKNAIIPIFLKKDKKNNKCDTIETNNPEWINKAGDVLKKKKESLTLLFSSPLHKKIEKKDKEVINDYENA 480 KVENIKKDNKNGRIKHPLKIEYFNEENKINTPKFPDDIISANENFKTNSFSFKSDILDTSVNNINANYEIFEKGDKIKNS 560 NSKVDSENIIDNDNKYKEHIIINNYNTNINLTPREFHEALIILEFLEVYKTQLTLVGLKLLQENLNPNQLVAFFRNNHFN 640 TLFKYNNKLFLLIGDISFLHLRCTWELFDSVSNDTIYCDNNFKCITSENMSNLFNQHISILNSFENMSNLKANMQSINAY 720 SSYLHSKKKKKKCTFM 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1417600 6 -MSSWLK|HN 0.074 . PBANKA_1417600 22 EENIIVR|FA 0.114 . PBANKA_1417600 30 ADYETFK|SY 0.067 . PBANKA_1417600 36 KSYVLNK|YD 0.068 . PBANKA_1417600 39 VLNKYDK|TN 0.061 . PBANKA_1417600 42 KYDKTNK|LH 0.057 . PBANKA_1417600 57 IYFYTVK|WI 0.065 . PBANKA_1417600 64 WITFINR|KV 0.100 . PBANKA_1417600 65 ITFINRK|VP 0.060 . PBANKA_1417600 73 PILLQNK|NG 0.050 . PBANKA_1417600 89 ANILLLR|NQ 0.070 . PBANKA_1417600 96 NQLHIDK|KI 0.057 . PBANKA_1417600 97 QLHIDKK|IK 0.108 . PBANKA_1417600 99 HIDKKIK|KI 0.079 . PBANKA_1417600 100 IDKKIKK|IS 0.122 . PBANKA_1417600 104 IKKISQK|VL 0.083 . PBANKA_1417600 109 QKVLEDK|II 0.076 . PBANKA_1417600 119 ILLESNK|KN 0.058 . PBANKA_1417600 120 LLESNKK|NV 0.091 . PBANKA_1417600 132 SASCNYR|KN 0.106 . PBANKA_1417600 133 ASCNYRK|NI 0.100 . PBANKA_1417600 146 DILPQLK|YG 0.057 . PBANKA_1417600 154 GLDVNCK|FT 0.074 . PBANKA_1417600 165 QSFEYTK|GL 0.064 . PBANKA_1417600 188 VISADDK|IF 0.070 . PBANKA_1417600 195 IFYPYLK|DY 0.067 . PBANKA_1417600 205 YNVIINK|VI 0.060 . PBANKA_1417600 208 IINKVIK|YN 0.086 . PBANKA_1417600 215 YNEYYEK|KR 0.057 . PBANKA_1417600 216 NEYYEKK|RK 0.099 . PBANKA_1417600 217 EYYEKKR|KS 0.177 . PBANKA_1417600 218 YYEKKRK|SA 0.255 . PBANKA_1417600 222 KRKSASK|EE 0.078 . PBANKA_1417600 229 EESSNER|LL 0.091 . PBANKA_1417600 253 GNCSAPK|KI 0.075 . PBANKA_1417600 254 NCSAPKK|IE 0.109 . PBANKA_1417600 258 PKKIEEK|DN 0.088 . PBANKA_1417600 270 NDMILSK|VD 0.059 . PBANKA_1417600 277 VDSNTDK|KL 0.074 . PBANKA_1417600 278 DSNTDKK|LE 0.080 . PBANKA_1417600 302 NSSFSIK|SY 0.114 . PBANKA_1417600 310 YSNTNAK|II 0.072 . PBANKA_1417600 313 TNAKIIK|SQ 0.114 . PBANKA_1417600 328 FPDDLDK|NF 0.070 . PBANKA_1417600 335 NFEDNFK|TN 0.060 . PBANKA_1417600 359 HDPWEDK|SK 0.081 . PBANKA_1417600 361 PWEDKSK|TD 0.063 . PBANKA_1417600 366 SKTDFNR|RF 0.094 . PBANKA_1417600 367 KTDFNRR|FY 0.156 . PBANKA_1417600 373 RFYNANR|NS 0.088 . PBANKA_1417600 393 YNMSNNK|NN 0.057 . PBANKA_1417600 398 NKNNVNK|NN 0.075 . PBANKA_1417600 411 NDSSSGK|KN 0.072 . PBANKA_1417600 412 DSSSGKK|NA 0.111 . PBANKA_1417600 421 IIPIFLK|KD 0.055 . PBANKA_1417600 422 IPIFLKK|DK 0.116 . PBANKA_1417600 424 IFLKKDK|KN 0.064 . PBANKA_1417600 425 FLKKDKK|NN 0.076 . PBANKA_1417600 428 KDKKNNK|CD 0.067 . PBANKA_1417600 442 NPEWINK|AG 0.062 . PBANKA_1417600 448 KAGDVLK|KK 0.065 . PBANKA_1417600 449 AGDVLKK|KK 0.084 . PBANKA_1417600 450 GDVLKKK|KE 0.090 . PBANKA_1417600 451 DVLKKKK|ES 0.094 . PBANKA_1417600 464 FSSPLHK|KI 0.082 . PBANKA_1417600 465 SSPLHKK|IE 0.083 . PBANKA_1417600 468 LHKKIEK|KD 0.062 . PBANKA_1417600 469 HKKIEKK|DK 0.179 . PBANKA_1417600 471 KIEKKDK|EV 0.082 . PBANKA_1417600 481 NDYENAK|VE 0.060 . PBANKA_1417600 486 AKVENIK|KD 0.065 . PBANKA_1417600 487 KVENIKK|DN 0.108 . PBANKA_1417600 490 NIKKDNK|NG 0.056 . PBANKA_1417600 493 KDNKNGR|IK 0.116 . PBANKA_1417600 495 NKNGRIK|HP 0.071 . PBANKA_1417600 499 RIKHPLK|IE 0.063 . PBANKA_1417600 508 YFNEENK|IN 0.065 . PBANKA_1417600 513 NKINTPK|FP 0.086 . PBANKA_1417600 526 SANENFK|TN 0.071 . PBANKA_1417600 533 TNSFSFK|SD 0.099 . PBANKA_1417600 553 NYEIFEK|GD 0.059 . PBANKA_1417600 556 IFEKGDK|IK 0.052 . PBANKA_1417600 558 EKGDKIK|NS 0.077 . PBANKA_1417600 563 IKNSNSK|VD 0.068 . PBANKA_1417600 575 IIDNDNK|YK 0.071 . PBANKA_1417600 577 DNDNKYK|EH 0.065 . PBANKA_1417600 594 NINLTPR|EF 0.109 . PBANKA_1417600 610 EFLEVYK|TQ 0.054 . PBANKA_1417600 619 LTLVGLK|LL 0.054 . PBANKA_1417600 635 QLVAFFR|NN 0.089 . PBANKA_1417600 644 HFNTLFK|YN 0.068 . PBANKA_1417600 648 LFKYNNK|LF 0.058 . PBANKA_1417600 662 ISFLHLR|CT 0.097 . PBANKA_1417600 683 YCDNNFK|CI 0.062 . PBANKA_1417600 711 ENMSNLK|AN 0.068 . PBANKA_1417600 727 SSYLHSK|KK 0.071 . PBANKA_1417600 728 SYLHSKK|KK 0.100 . PBANKA_1417600 729 YLHSKKK|KK 0.106 . PBANKA_1417600 730 LHSKKKK|KK 0.159 . PBANKA_1417600 731 HSKKKKK|KC 0.121 . PBANKA_1417600 732 SKKKKKK|CT 0.169 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1417600 ATGTCATCCTGGTTAAAACATAATTATGATGGAAACAGCGATGAAGAAGAAAATATTATA GTTCGATTCGCCGATTATGAGACTTTTAAGTCTTATGTATTAAATAAGTATGATAAAACA AATAAATTACACAATTATCAAACGGATAATATATATTTTTATACAGTTAAATGGATTACT TTTATAAACAGGAAAGTTCCAATTTTACTTCAAAATAAAAATGGAGCATGTCCTCTTTTA TGTATAGCTAATATATTACTATTACGAAATCAATTACATATAGATAAAAAAATTAAAAAA ATATCTCAAAAAGTACTAGAAGACAAAATAATAAGTATATTATTGGAATCAAATAAAAAA AATGTAACAAATAATAGTGCTTCATGTAATTATAGAAAAAATATAATTGAATGTATAGAT ATATTACCACAATTAAAATATGGATTAGATGTAAATTGTAAATTTACAGATATACAATCA TTTGAATATACTAAAGGATTATGCATATTCGATATGTTAAATATTCCACTATATCATGGC TGGGTAATATCAGCTGATGATAAAATATTTTATCCTTATTTAAAAGATTATTCATATAAT GTCATTATAAATAAAGTTATTAAATATAATGAATATTATGAAAAAAAAAGAAAGAGTGCA TCTAAAGAAGAATCATCAAATGAAAGATTGCTAATTATATCTCAGGCCTTAAATTTAGAT TTTGAAAGTGATGATGGAGGAAATTGCAGTGCTCCAAAAAAAATCGAAGAAAAAGATAAC ATCCATATAAATGATATGATTCTTTCGAAAGTGGATTCAAATACGGATAAAAAATTAGAA TTTGAAACATGTGAACATATAAATACAATGCCTATTGAAAATTCTAACTCAAGTTTTAGT ATAAAATCTTATAGTAACACAAATGCAAAAATAATAAAATCACAGAGCAGTAGCATACCT ATATTCCCCGATGATTTGGATAAAAATTTTGAAGATAATTTTAAAACAAATATGCCTCAA AATTCGGTTCTTAATTTAGGTAACTATAATGTTGGGCATGACCCTTGGGAAGATAAGAGC AAAACGGATTTCAATAGACGATTTTATAATGCCAATCGAAATTCATATAACAATGAAATA GGAATAATTAATAATAATTATAATATGAGTAATAATAAAAATAATGTAAATAAAAATAAC ATTAACAATAATAATGATAGTTCTAGTGGAAAAAAAAATGCTATTATCCCGATTTTTTTG AAAAAGGACAAAAAAAACAATAAATGTGATACAATAGAAACAAATAATCCAGAATGGATA AATAAAGCTGGAGATGTATTAAAAAAAAAAAAAGAATCTTTAACTCTTTTATTTTCGTCT CCATTACATAAAAAAATTGAAAAAAAGGATAAAGAAGTCATAAATGATTATGAAAATGCA AAAGTAGAAAATATAAAGAAAGACAATAAAAATGGACGTATAAAACATCCTTTAAAAATA GAATATTTTAATGAAGAAAATAAAATAAATACCCCTAAATTCCCAGATGATATTATATCT GCTAATGAAAATTTTAAAACAAACTCATTTTCATTCAAATCGGATATTCTAGACACTAGT GTAAATAATATTAATGCAAATTATGAGATATTTGAAAAAGGGGATAAAATCAAAAATTCA AATAGTAAAGTGGATTCTGAAAATATTATAGATAATGATAATAAATATAAAGAACATATA ATTATAAATAATTATAATACTAATATCAATTTAACACCACGTGAATTCCATGAAGCATTA ATTATACTTGAATTTTTAGAAGTTTATAAAACTCAATTGACATTAGTTGGCTTGAAGTTA TTACAAGAAAATTTAAATCCTAACCAACTAGTAGCATTTTTTAGAAATAACCATTTTAAT ACTCTTTTTAAATATAACAATAAATTATTTTTATTAATTGGAGATATTTCTTTTTTGCAT TTAAGATGCACATGGGAATTATTTGATAGTGTAAGTAATGACACTATTTATTGTGATAAT AATTTTAAATGTATAACAAGCGAAAATATGTCAAATTTGTTCAATCAACATATTTCAATT TTAAACAGTTTTGAAAACATGAGTAATTTGAAAGCAAATATGCAATCTATAAATGCATAT TCATCCTATTTACATAGTAAAAAAAAAAAAAAAAAATGTACATTCATGTAG
  • Download Fasta

  • Fasta :-

    MSSWLKHNYDGNSDEEENIIVRFADYETFKSYVLNKYDKTNKLHNYQTDNIYFYTVKWIT FINRKVPILLQNKNGACPLLCIANILLLRNQLHIDKKIKKISQKVLEDKIISILLESNKK NVTNNSASCNYRKNIIECIDILPQLKYGLDVNCKFTDIQSFEYTKGLCIFDMLNIPLYHG WVISADDKIFYPYLKDYSYNVIINKVIKYNEYYEKKRKSASKEESSNERLLIISQALNLD FESDDGGNCSAPKKIEEKDNIHINDMILSKVDSNTDKKLEFETCEHINTMPIENSNSSFS IKSYSNTNAKIIKSQSSSIPIFPDDLDKNFEDNFKTNMPQNSVLNLGNYNVGHDPWEDKS KTDFNRRFYNANRNSYNNEIGIINNNYNMSNNKNNVNKNNINNNNDSSSGKKNAIIPIFL KKDKKNNKCDTIETNNPEWINKAGDVLKKKKESLTLLFSSPLHKKIEKKDKEVINDYENA KVENIKKDNKNGRIKHPLKIEYFNEENKINTPKFPDDIISANENFKTNSFSFKSDILDTS VNNINANYEIFEKGDKIKNSNSKVDSENIIDNDNKYKEHIIINNYNTNINLTPREFHEAL IILEFLEVYKTQLTLVGLKLLQENLNPNQLVAFFRNNHFNTLFKYNNKLFLLIGDISFLH LRCTWELFDSVSNDTIYCDNNFKCITSENMSNLFNQHISILNSFENMSNLKANMQSINAY SSYLHSKKKKKKCTFM

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1417600221 SRKSASKEES0.998unspPBANKA_1417600221 SRKSASKEES0.998unspPBANKA_1417600221 SRKSASKEES0.998unspPBANKA_1417600300 SNSSFSIKSY0.994unspPBANKA_1417600562 SKNSNSKVDS0.996unspPBANKA_1417600102 SIKKISQKVL0.991unspPBANKA_1417600219 SKKRKSASKE0.997unsp

PBANKA_141760      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India