PBANKA_1433500 | PPPDE peptidase domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PBANKA_1433500OTHER0.9969710.0021310.000897
No Results

  • Fasta :-

    >PBANKA_1433500 MATTYNVKLKIYDLSRGMVKLWSPLLIGKQIGGVWHTAVLIYNMEYFYGGGIMCLPPNEF ESHYNIKPVEIIDMGETEVDKTFFHDYLDGIRPNFTTDKYNLINWNCNNFTNEACNFLLG KGIPQYILNTPYEVMSTPKGKLILDMMQSCQTSIAPGMENSSTINSEIKNDSISNNNDSQ KNNETEYSKVPSVSMDNFFTGNKINIIFEDYLKSDKCDSNEKKKIFNSLSSFFRKLINNL DILQNRIIYKKNNEIFNNVSNDSEYNKILSYIGFVKGYVEIDEINNLQVFTLYIDSKYNK NSPTSKNIDLFINKKIYLKSLDSSIYKVDLLSFKNISEYVLDSNTKKTNVNEVYVFLSEY FISNHFDITNSKNDNNNFRTIKSAISSDLETEKQYLINIYELVTKHLNLL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1433500.fa Sequence name : PBANKA_1433500 Sequence length : 410 VALUES OF COMPUTED PARAMETERS Coef20 : 4.068 CoefTot : -3.518 ChDiff : -5 ZoneTo : 58 KR : 5 DE : 2 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.871 1.276 0.077 0.575 MesoH : -0.535 0.171 -0.429 0.273 MuHd_075 : 32.016 14.925 8.297 7.125 MuHd_095 : 37.803 23.649 8.431 7.709 MuHd_100 : 39.704 22.731 9.490 8.172 MuHd_105 : 42.107 23.867 10.178 8.477 Hmax_075 : 16.300 14.900 2.633 6.770 Hmax_095 : 19.600 20.700 2.526 7.250 Hmax_100 : 17.400 16.500 2.872 5.970 Hmax_105 : 18.083 18.200 3.333 6.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5713 0.4287 DFMC : 0.8400 0.1600
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 410 PBANKA_1433500 MATTYNVKLKIYDLSRGMVKLWSPLLIGKQIGGVWHTAVLIYNMEYFYGGGIMCLPPNEFESHYNIKPVEIIDMGETEVD 80 KTFFHDYLDGIRPNFTTDKYNLINWNCNNFTNEACNFLLGKGIPQYILNTPYEVMSTPKGKLILDMMQSCQTSIAPGMEN 160 SSTINSEIKNDSISNNNDSQKNNETEYSKVPSVSMDNFFTGNKINIIFEDYLKSDKCDSNEKKKIFNSLSSFFRKLINNL 240 DILQNRIIYKKNNEIFNNVSNDSEYNKILSYIGFVKGYVEIDEINNLQVFTLYIDSKYNKNSPTSKNIDLFINKKIYLKS 320 LDSSIYKVDLLSFKNISEYVLDSNTKKTNVNEVYVFLSEYFISNHFDITNSKNDNNNFRTIKSAISSDLETEKQYLINIY 400 ELVTKHLNLL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1433500 8 ATTYNVK|LK 0.055 . PBANKA_1433500 10 TYNVKLK|IY 0.093 . PBANKA_1433500 16 KIYDLSR|GM 0.074 . PBANKA_1433500 20 LSRGMVK|LW 0.072 . PBANKA_1433500 29 SPLLIGK|QI 0.085 . PBANKA_1433500 67 ESHYNIK|PV 0.115 . PBANKA_1433500 81 GETEVDK|TF 0.058 . PBANKA_1433500 92 DYLDGIR|PN 0.066 . PBANKA_1433500 99 PNFTTDK|YN 0.061 . PBANKA_1433500 121 CNFLLGK|GI 0.072 . PBANKA_1433500 139 EVMSTPK|GK 0.064 . PBANKA_1433500 141 MSTPKGK|LI 0.081 . PBANKA_1433500 169 TINSEIK|ND 0.073 . PBANKA_1433500 181 NNNDSQK|NN 0.078 . PBANKA_1433500 189 NETEYSK|VP 0.061 . PBANKA_1433500 203 NFFTGNK|IN 0.056 . PBANKA_1433500 213 IFEDYLK|SD 0.057 . PBANKA_1433500 216 DYLKSDK|CD 0.057 . PBANKA_1433500 222 KCDSNEK|KK 0.052 . PBANKA_1433500 223 CDSNEKK|KI 0.171 . PBANKA_1433500 224 DSNEKKK|IF 0.094 . PBANKA_1433500 234 SLSSFFR|KL 0.122 . PBANKA_1433500 235 LSSFFRK|LI 0.100 . PBANKA_1433500 246 LDILQNR|II 0.101 . PBANKA_1433500 250 QNRIIYK|KN 0.075 . PBANKA_1433500 251 NRIIYKK|NN 0.103 . PBANKA_1433500 267 NDSEYNK|IL 0.085 . PBANKA_1433500 276 SYIGFVK|GY 0.064 . PBANKA_1433500 297 TLYIDSK|YN 0.073 . PBANKA_1433500 300 IDSKYNK|NS 0.067 . PBANKA_1433500 306 KNSPTSK|NI 0.077 . PBANKA_1433500 314 IDLFINK|KI 0.056 . PBANKA_1433500 315 DLFINKK|IY 0.092 . PBANKA_1433500 319 NKKIYLK|SL 0.079 . PBANKA_1433500 327 LDSSIYK|VD 0.058 . PBANKA_1433500 334 VDLLSFK|NI 0.065 . PBANKA_1433500 346 VLDSNTK|KT 0.062 . PBANKA_1433500 347 LDSNTKK|TN 0.107 . PBANKA_1433500 372 FDITNSK|ND 0.059 . PBANKA_1433500 379 NDNNNFR|TI 0.113 . PBANKA_1433500 382 NNFRTIK|SA 0.220 . PBANKA_1433500 393 SDLETEK|QY 0.059 . PBANKA_1433500 405 IYELVTK|HL 0.062 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1433500 ATGGCAACGACATATAATGTTAAGCTAAAGATATACGACTTATCCCGTGGAATGGTGAAA TTGTGGTCTCCGCTTTTAATTGGGAAACAAATTGGTGGGGTTTGGCATACAGCTGTTTTG ATATATAACATGGAATATTTTTACGGTGGAGGGATAATGTGTTTGCCTCCAAACGAATTT GAATCACATTATAACATAAAACCAGTAGAAATTATAGATATGGGAGAAACTGAAGTAGAT AAAACATTTTTTCATGATTATCTTGATGGGATTCGACCGAATTTTACTACAGATAAATAT AATTTAATTAATTGGAATTGTAATAATTTTACTAATGAAGCTTGTAATTTTCTTCTTGGA AAAGGTATTCCTCAATATATTTTGAACACACCTTATGAAGTTATGTCAACACCTAAAGGA AAGTTAATATTAGACATGATGCAGTCATGCCAAACATCCATTGCGCCGGGTATGGAAAAC AGTTCCACAATTAATAGTGAAATAAAAAATGATAGCATTAGTAATAATAATGATAGCCAA AAAAATAATGAAACTGAATACTCTAAAGTCCCTAGTGTATCTATGGATAATTTTTTTACG GGGAATAAAATAAACATTATATTTGAAGATTATTTAAAAAGTGATAAGTGTGATTCAAAT GAAAAAAAAAAAATTTTTAATTCATTAAGTTCATTTTTTAGAAAATTAATTAATAATCTC GATATATTACAAAATAGGATTATATATAAAAAAAATAACGAAATATTTAATAATGTTTCA AACGATTCAGAATATAATAAAATATTATCTTATATTGGATTTGTTAAAGGATACGTTGAA ATTGATGAAATAAATAATTTACAAGTTTTTACACTTTATATAGATTCAAAATATAATAAA AATTCCCCCACTTCAAAAAATATCGATTTATTTATAAATAAAAAAATATATTTAAAAAGT TTAGATTCATCTATTTATAAAGTAGACCTTTTATCTTTTAAAAATATTTCTGAATATGTT CTTGATAGTAATACAAAAAAAACAAACGTTAATGAAGTTTATGTTTTTTTATCAGAGTAT TTTATAAGCAACCATTTTGATATTACAAATAGCAAAAATGACAATAACAATTTTAGAACT ATAAAAAGTGCAATTAGTTCAGATTTGGAAACAGAAAAACAATATTTGATCAATATATAT GAGCTAGTGACCAAACACCTAAATTTGTTATAG
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  • Fasta :-

    MATTYNVKLKIYDLSRGMVKLWSPLLIGKQIGGVWHTAVLIYNMEYFYGGGIMCLPPNEF ESHYNIKPVEIIDMGETEVDKTFFHDYLDGIRPNFTTDKYNLINWNCNNFTNEACNFLLG KGIPQYILNTPYEVMSTPKGKLILDMMQSCQTSIAPGMENSSTINSEIKNDSISNNNDSQ KNNETEYSKVPSVSMDNFFTGNKINIIFEDYLKSDKCDSNEKKKIFNSLSSFFRKLINNL DILQNRIIYKKNNEIFNNVSNDSEYNKILSYIGFVKGYVEIDEINNLQVFTLYIDSKYNK NSPTSKNIDLFINKKIYLKSLDSSIYKVDLLSFKNISEYVLDSNTKKTNVNEVYVFLSEY FISNHFDITNSKNDNNNFRTIKSAISSDLETEKQYLINIYELVTKHLNLL

    No Results
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IDSitePeptideScoreMethod
PBANKA_1433500179 SNNNDSQKNN0.996unsp

PBANKA_143350      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India