PBANKA_1454100 | ATP-dependent zinc metalloprotease FTSH 1, putative

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1454100OTHER0.9997500.0000080.000241
No Results

  • Fasta :-

    >PBANKA_1454100 MYNYYKNFTSKIMNSNQYENDNYASSESDKHGEEDDSALLPNGDRKYMNESKSNQYNIEN GHYGYYDKFFGKRRNKKWNYFVIFFLGVCLGFAIWPFLMTIITYKLVYKDNYNNHNFPTS DNLNSLKPYVNDKNRKNDNPNNRAPPSDHGQKKPSPHFKPVKFDEIAGIDESKLELLEVV DFIKNRERYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQ GAKRIRQLFSHARSVAPSIVFIDEIDAIGGKRSSSASNGAGQKEHDQTLNQLLVEMDGFS NTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDVNGRKKILEIYIKKIKSNLNAND IERMSRLTPGFSGADLENLVNEATILATRNKKSLVTINELFEARDKVSMGPERKSLKQSE HQRRITAYHEAGHAIVAYFLHPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEA KLAVCMGGRTAEEIVFGKSETSSGASSDISRATDIAYKMVTEWGMSDKLGPLNYKKRMGD GYSSMRLSAQTISAIETEVKTLVEKGKGISEEILRRHRKELDNLAFALLDKETLTGDEIK KIVDPNNSRDQSNRYQLLNKDSKNDDTQNDHNNSGKKSVRNDGKTNTSKNEKNEPNSHEN KHKDSREIDTNDKDTTNNMKSDEVNDTNKMENFIESKYIDTKDITTLSSENEIGILSKHF KNENKKLKKKYSRDPNTKNCNVLKMVNSHRPSYYSKNENFDSENSINNSLDDYSNNFRNT RDSENNYDNNNPVKNTSEPFTNDFSEENNNDNLSSVKTKDINYNNFQEIVDISLIKNVSE MKKFNIYEHNLNKLFLFDIFNN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1454100.fa Sequence name : PBANKA_1454100 Sequence length : 862 VALUES OF COMPUTED PARAMETERS Coef20 : 3.315 CoefTot : -1.321 ChDiff : 3 ZoneTo : 18 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.518 2.412 0.472 0.941 MesoH : -0.558 0.294 -0.342 0.207 MuHd_075 : 20.452 7.947 6.318 4.174 MuHd_095 : 27.582 19.176 8.003 6.081 MuHd_100 : 26.721 19.188 8.374 6.267 MuHd_105 : 21.822 15.983 7.475 5.658 Hmax_075 : 2.450 -0.400 -2.660 2.130 Hmax_095 : 7.525 3.763 -1.026 3.124 Hmax_100 : 6.500 2.900 -1.042 2.930 Hmax_105 : 10.600 5.100 0.560 3.530 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9467 0.0533 DFMC : 0.9594 0.0406
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 862 PBANKA_1454100 MYNYYKNFTSKIMNSNQYENDNYASSESDKHGEEDDSALLPNGDRKYMNESKSNQYNIENGHYGYYDKFFGKRRNKKWNY 80 FVIFFLGVCLGFAIWPFLMTIITYKLVYKDNYNNHNFPTSDNLNSLKPYVNDKNRKNDNPNNRAPPSDHGQKKPSPHFKP 160 VKFDEIAGIDESKLELLEVVDFIKNRERYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQ 240 GAKRIRQLFSHARSVAPSIVFIDEIDAIGGKRSSSASNGAGQKEHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSA 320 LLRPGRFDRIVYVPLPDVNGRKKILEIYIKKIKSNLNANDIERMSRLTPGFSGADLENLVNEATILATRNKKSLVTINEL 400 FEARDKVSMGPERKSLKQSEHQRRITAYHEAGHAIVAYFLHPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEA 480 KLAVCMGGRTAEEIVFGKSETSSGASSDISRATDIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSMRLSAQTISAIETEVK 560 TLVEKGKGISEEILRRHRKELDNLAFALLDKETLTGDEIKKIVDPNNSRDQSNRYQLLNKDSKNDDTQNDHNNSGKKSVR 640 NDGKTNTSKNEKNEPNSHENKHKDSREIDTNDKDTTNNMKSDEVNDTNKMENFIESKYIDTKDITTLSSENEIGILSKHF 720 KNENKKLKKKYSRDPNTKNCNVLKMVNSHRPSYYSKNENFDSENSINNSLDDYSNNFRNTRDSENNYDNNNPVKNTSEPF 800 TNDFSEENNNDNLSSVKTKDINYNNFQEIVDISLIKNVSEMKKFNIYEHNLNKLFLFDIFNN 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .............................................................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1454100 6 -MYNYYK|NF 0.063 . PBANKA_1454100 11 YKNFTSK|IM 0.067 . PBANKA_1454100 30 ASSESDK|HG 0.074 . PBANKA_1454100 45 LLPNGDR|KY 0.068 . PBANKA_1454100 46 LPNGDRK|YM 0.104 . PBANKA_1454100 52 KYMNESK|SN 0.077 . PBANKA_1454100 68 HYGYYDK|FF 0.073 . PBANKA_1454100 72 YDKFFGK|RR 0.061 . PBANKA_1454100 73 DKFFGKR|RN 0.118 . PBANKA_1454100 74 KFFGKRR|NK 0.124 . PBANKA_1454100 76 FGKRRNK|KW 0.102 . PBANKA_1454100 77 GKRRNKK|WN 0.378 . PBANKA_1454100 105 MTIITYK|LV 0.071 . PBANKA_1454100 109 TYKLVYK|DN 0.071 . PBANKA_1454100 127 DNLNSLK|PY 0.057 . PBANKA_1454100 133 KPYVNDK|NR 0.059 . PBANKA_1454100 135 YVNDKNR|KN 0.088 . PBANKA_1454100 136 VNDKNRK|ND 0.081 . PBANKA_1454100 143 NDNPNNR|AP 0.085 . PBANKA_1454100 152 PSDHGQK|KP 0.064 . PBANKA_1454100 153 SDHGQKK|PS 0.121 . PBANKA_1454100 159 KPSPHFK|PV 0.131 . PBANKA_1454100 162 PHFKPVK|FD 0.083 . PBANKA_1454100 173 AGIDESK|LE 0.056 . PBANKA_1454100 184 EVVDFIK|NR 0.065 . PBANKA_1454100 186 VDFIKNR|ER 0.093 . PBANKA_1454100 188 FIKNRER|YQ 0.110 . PBANKA_1454100 195 YQEMGAR|MP 0.090 . PBANKA_1454100 198 MGARMPK|GV 0.226 . PBANKA_1454100 210 GPPGSGK|TM 0.056 . PBANKA_1454100 215 GKTMLAR|AV 0.144 . PBANKA_1454100 243 YVGQGAK|RI 0.065 . PBANKA_1454100 244 VGQGAKR|IR 0.105 . PBANKA_1454100 246 QGAKRIR|QL 0.109 . PBANKA_1454100 253 QLFSHAR|SV 0.247 . PBANKA_1454100 271 IDAIGGK|RS 0.061 . PBANKA_1454100 272 DAIGGKR|SS 0.297 . PBANKA_1454100 283 SNGAGQK|EH 0.070 . PBANKA_1454100 313 VIGATNR|ID 0.065 . PBANKA_1454100 323 LDSALLR|PG 0.076 . PBANKA_1454100 326 ALLRPGR|FD 0.201 . PBANKA_1454100 329 RPGRFDR|IV 0.496 . PBANKA_1454100 341 LPDVNGR|KK 0.082 . PBANKA_1454100 342 PDVNGRK|KI 0.071 . PBANKA_1454100 343 DVNGRKK|IL 0.118 . PBANKA_1454100 350 ILEIYIK|KI 0.062 . PBANKA_1454100 351 LEIYIKK|IK 0.081 . PBANKA_1454100 353 IYIKKIK|SN 0.075 . PBANKA_1454100 363 NANDIER|MS 0.081 . PBANKA_1454100 366 DIERMSR|LT 0.134 . PBANKA_1454100 389 ATILATR|NK 0.063 . PBANKA_1454100 391 ILATRNK|KS 0.061 . PBANKA_1454100 392 LATRNKK|SL 0.407 . PBANKA_1454100 404 NELFEAR|DK 0.092 . PBANKA_1454100 406 LFEARDK|VS 0.057 . PBANKA_1454100 413 VSMGPER|KS 0.083 . PBANKA_1454100 414 SMGPERK|SL 0.233 . PBANKA_1454100 417 PERKSLK|QS 0.080 . PBANKA_1454100 423 KQSEHQR|RI 0.126 . PBANKA_1454100 424 QSEHQRR|IT 0.204 . PBANKA_1454100 443 AYFLHPK|TD 0.060 . PBANKA_1454100 449 KTDPIHK|AT 0.068 . PBANKA_1454100 455 KATIISR|GN 0.083 . PBANKA_1454100 470 QIPVDDR|HN 0.077 . PBANKA_1454100 475 DRHNYFK|SQ 0.101 . PBANKA_1454100 481 KSQMEAK|LA 0.077 . PBANKA_1454100 489 AVCMGGR|TA 0.105 . PBANKA_1454100 498 EEIVFGK|SE 0.082 . PBANKA_1454100 511 ASSDISR|AT 0.168 . PBANKA_1454100 518 ATDIAYK|MV 0.073 . PBANKA_1454100 528 EWGMSDK|LG 0.056 . PBANKA_1454100 535 LGPLNYK|KR 0.056 . PBANKA_1454100 536 GPLNYKK|RM 0.126 . PBANKA_1454100 537 PLNYKKR|MG 0.253 . PBANKA_1454100 546 DGYSSMR|LS 0.079 . PBANKA_1454100 560 AIETEVK|TL 0.064 . PBANKA_1454100 565 VKTLVEK|GK 0.075 . PBANKA_1454100 567 TLVEKGK|GI 0.101 . PBANKA_1454100 575 ISEEILR|RH 0.080 . PBANKA_1454100 576 SEEILRR|HR 0.092 . PBANKA_1454100 578 EILRRHR|KE 0.128 . PBANKA_1454100 579 ILRRHRK|EL 0.351 . PBANKA_1454100 591 AFALLDK|ET 0.060 . PBANKA_1454100 600 LTGDEIK|KI 0.064 . PBANKA_1454100 601 TGDEIKK|IV 0.128 . PBANKA_1454100 609 VDPNNSR|DQ 0.076 . PBANKA_1454100 614 SRDQSNR|YQ 0.096 . PBANKA_1454100 620 RYQLLNK|DS 0.065 . PBANKA_1454100 623 LLNKDSK|ND 0.074 . PBANKA_1454100 636 DHNNSGK|KS 0.067 . PBANKA_1454100 637 HNNSGKK|SV 0.288 . PBANKA_1454100 640 SGKKSVR|ND 0.120 . PBANKA_1454100 644 SVRNDGK|TN 0.064 . PBANKA_1454100 649 GKTNTSK|NE 0.061 . PBANKA_1454100 652 NTSKNEK|NE 0.059 . PBANKA_1454100 661 PNSHENK|HK 0.079 . PBANKA_1454100 663 SHENKHK|DS 0.092 . PBANKA_1454100 666 NKHKDSR|EI 0.140 . PBANKA_1454100 673 EIDTNDK|DT 0.063 . PBANKA_1454100 680 DTTNNMK|SD 0.075 . PBANKA_1454100 689 EVNDTNK|ME 0.063 . PBANKA_1454100 697 ENFIESK|YI 0.077 . PBANKA_1454100 702 SKYIDTK|DI 0.073 . PBANKA_1454100 718 EIGILSK|HF 0.063 . PBANKA_1454100 721 ILSKHFK|NE 0.088 . PBANKA_1454100 725 HFKNENK|KL 0.062 . PBANKA_1454100 726 FKNENKK|LK 0.093 . PBANKA_1454100 728 NENKKLK|KK 0.068 . PBANKA_1454100 729 ENKKLKK|KY 0.107 . PBANKA_1454100 730 NKKLKKK|YS 0.109 . PBANKA_1454100 733 LKKKYSR|DP 0.117 . PBANKA_1454100 738 SRDPNTK|NC 0.064 . PBANKA_1454100 744 KNCNVLK|MV 0.101 . PBANKA_1454100 750 KMVNSHR|PS 0.089 . PBANKA_1454100 756 RPSYYSK|NE 0.063 . PBANKA_1454100 778 DYSNNFR|NT 0.120 . PBANKA_1454100 781 NNFRNTR|DS 0.329 . PBANKA_1454100 794 DNNNPVK|NT 0.077 . PBANKA_1454100 817 DNLSSVK|TK 0.062 . PBANKA_1454100 819 LSSVKTK|DI 0.132 . PBANKA_1454100 836 VDISLIK|NV 0.073 . PBANKA_1454100 842 KNVSEMK|KF 0.068 . PBANKA_1454100 843 NVSEMKK|FN 0.118 . PBANKA_1454100 853 YEHNLNK|LF 0.055 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1454100 ATGTATAACTATTACAAAAATTTTACAAGTAAAATTATGAATTCTAATCAATATGAAAAT GACAATTATGCATCTTCCGAATCAGACAAGCATGGTGAAGAAGATGATTCTGCATTACTT CCAAATGGAGATAGAAAATATATGAATGAGAGCAAGAGTAATCAATATAATATTGAGAAT GGGCATTATGGATATTATGATAAATTTTTTGGTAAACGAAGAAACAAAAAATGGAATTAT TTTGTCATATTTTTTCTAGGCGTATGCCTAGGATTCGCTATATGGCCATTTCTTATGACA ATCATTACATATAAATTAGTTTATAAAGATAATTATAATAATCATAATTTTCCAACAAGT GATAATTTGAATTCTTTAAAACCTTATGTAAATGATAAAAATAGAAAGAATGATAATCCT AATAATAGAGCGCCTCCAAGCGACCACGGTCAAAAAAAGCCATCTCCACATTTTAAACCC GTAAAATTTGATGAAATTGCTGGAATAGATGAATCAAAATTAGAACTTTTAGAAGTTGTT GATTTTATAAAAAATAGAGAACGCTATCAAGAAATGGGTGCACGAATGCCTAAAGGTGTG TTATTAGTTGGACCTCCAGGATCTGGTAAAACTATGCTAGCTCGAGCAGTAGCTACCGAA GCTAATGTTCCATATATATATACATCTGGTCCAGAATTTATAGAAATATATGTAGGTCAA GGAGCAAAAAGAATCAGGCAATTATTTTCACATGCTAGATCAGTTGCACCGTCAATTGTT TTTATCGATGAAATTGATGCAATAGGAGGGAAACGTAGTTCTAGCGCATCTAATGGTGCA GGGCAAAAAGAACATGATCAAACATTAAATCAATTATTAGTTGAAATGGATGGATTTAGT AATACTGTGCATATTATGGTCATAGGGGCAACGAATAGAATTGATACTTTAGATAGTGCT TTACTTAGACCTGGAAGATTTGATAGAATTGTATATGTTCCATTACCAGATGTAAACGGC AGGAAAAAAATACTAGAAATTTACATAAAAAAAATTAAAAGTAATTTAAATGCGAATGAT ATTGAAAGAATGTCGAGATTGACACCTGGTTTTTCGGGCGCCGATTTAGAAAACCTTGTA AATGAAGCAACTATATTAGCTACGCGAAACAAAAAAAGTTTAGTTACTATAAACGAATTA TTTGAAGCACGAGATAAAGTTTCGATGGGGCCTGAAAGAAAATCGTTAAAACAATCAGAA CATCAAAGGAGAATAACTGCTTATCATGAAGCTGGGCATGCAATAGTTGCATATTTTCTT CACCCCAAAACAGATCCTATACATAAAGCTACTATTATTTCTAGAGGTAATGCTTTAGGT TATGTAGAGCAAATACCTGTTGATGATAGGCATAATTATTTTAAAAGTCAAATGGAAGCA AAATTAGCAGTATGTATGGGGGGAAGAACAGCAGAAGAAATTGTTTTCGGGAAATCTGAA ACAAGTAGTGGAGCATCTAGTGATATTTCAAGAGCTACTGATATAGCTTATAAAATGGTA ACCGAGTGGGGAATGTCAGATAAATTAGGTCCATTAAATTATAAAAAAAGAATGGGTGAT GGGTATTCTTCTATGAGATTATCAGCTCAAACTATATCAGCTATAGAAACGGAAGTTAAA ACTTTAGTAGAAAAGGGAAAAGGCATATCAGAAGAAATTTTAAGAAGACATAGAAAAGAA TTAGATAATTTAGCCTTTGCATTATTAGATAAAGAAACATTAACTGGAGACGAAATTAAA AAAATAGTTGATCCTAATAATTCAAGGGATCAATCAAATAGATATCAACTCTTGAATAAA GATTCTAAGAATGATGATACACAAAATGATCACAATAATAGTGGAAAGAAATCTGTACGA AACGATGGGAAAACAAACACATCAAAAAACGAAAAAAATGAACCAAATTCTCATGAAAAT AAGCATAAAGATTCTAGAGAAATTGATACCAATGACAAAGATACCACCAATAATATGAAA TCTGATGAAGTTAATGATACTAATAAAATGGAGAATTTTATCGAAAGTAAATACATTGAT ACTAAAGATATAACGACACTTTCTTCTGAAAACGAAATTGGAATTTTAAGTAAACATTTT AAAAATGAAAACAAAAAACTTAAGAAAAAATATTCGAGGGATCCAAACACCAAGAATTGC AATGTGCTAAAAATGGTAAATAGTCACAGGCCATCATATTATTCTAAAAATGAAAACTTT GACTCAGAAAATAGTATTAATAACTCATTGGATGATTATTCTAACAATTTTAGAAATACT AGAGATAGCGAAAACAACTATGATAATAATAACCCTGTAAAAAATACTAGTGAACCTTTT ACAAACGATTTTTCTGAAGAAAATAATAATGATAATTTAAGTTCTGTAAAAACAAAAGAT ATAAATTATAATAATTTTCAGGAAATAGTAGATATATCACTTATTAAAAATGTTTCTGAA ATGAAGAAGTTCAATATTTATGAGCATAATTTGAATAAATTATTTTTATTTGACATTTTT AATAATTAA
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  • Fasta :-

    No Results
  • title: ATP binding site
  • coordinates: P205,P206,G207,S208,G209,K210,T211,M212,D263,N312
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1454100275 SKRSSSASNG0.995unspPBANKA_1454100275 SKRSSSASNG0.995unspPBANKA_1454100275 SKRSSSASNG0.995unspPBANKA_1454100415 SPERKSLKQS0.997unspPBANKA_1454100657 SNEPNSHENK0.995unspPBANKA_1454100681 SNNMKSDEVN0.991unspPBANKA_1454100783 SNTRDSENNY0.997unspPBANKA_145410028 SASSESDKHG0.992unspPBANKA_1454100155 SQKKPSPHFK0.99unsp

PBANKA_145410      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India