PBANKA_1454400 | 3-hydroxyisobutyryl-CoA hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PBANKA_1454400OTHER0.9951890.0000110.004801
No Results

  • Fasta :-

    >PBANKA_1454400 MFSSQYFKLKKDISHIKKLKWNEIKFRDKNYLFTCANFEKKKINVKILVNCENKATKSFY KYSNNSNLYTNVQEIENNHKNVLSKKMENTNENINMNKRYISDECNKGDLFRKTEKDKNN ELDRYNVENMNDGIKSKKSNSDDIIDLTLSDVWSKKTLIVEYKNNIIEILLNRKEKLNAI NKDMINGLLNMVKSLSNDDRCNLIVIRSINQNCFCSGSDVKDIVQNKDQGINHLKQLYKY INFISKINKNILCIWNGYAMGGGLGISMYTQYRIINTNVIFSMPENKIGFFPDVGSSYFL KKYFSRNIALHLGLTSLRLNEIDLINFKVCTNYIKNLDQFLNELYNIKKEDPNKFNEEFI KILNKYPPKVNVNAKPVLTEELISNIDKYYTSANNLEELINNLKKNEDNDNFCKQLLLDI NANCYFSCQLWFSYFIYNYEKSMEEVLDNDFKMTQYFLYHTNTFEKGVTEILIKKNKNFQ WIKDHENNPVQLEETIEDILMNKNLLSIKDEFI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PBANKA_1454400.fa Sequence name : PBANKA_1454400 Sequence length : 513 VALUES OF COMPUTED PARAMETERS Coef20 : 3.760 CoefTot : -0.305 ChDiff : 9 ZoneTo : 11 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.106 0.224 0.615 MesoH : -0.214 0.309 -0.316 0.263 MuHd_075 : 6.562 4.723 0.525 2.195 MuHd_095 : 13.455 14.828 5.018 4.558 MuHd_100 : 20.887 18.900 7.890 6.514 MuHd_105 : 25.608 20.431 10.112 7.262 Hmax_075 : -6.767 -0.525 -4.030 0.700 Hmax_095 : 2.188 7.700 -1.809 3.194 Hmax_100 : 2.800 10.500 -0.989 3.990 Hmax_105 : 14.700 15.750 2.901 6.043 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6629 0.3371 DFMC : 0.8011 0.1989
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 513 PBANKA_1454400 MFSSQYFKLKKDISHIKKLKWNEIKFRDKNYLFTCANFEKKKINVKILVNCENKATKSFYKYSNNSNLYTNVQEIENNHK 80 NVLSKKMENTNENINMNKRYISDECNKGDLFRKTEKDKNNELDRYNVENMNDGIKSKKSNSDDIIDLTLSDVWSKKTLIV 160 EYKNNIIEILLNRKEKLNAINKDMINGLLNMVKSLSNDDRCNLIVIRSINQNCFCSGSDVKDIVQNKDQGINHLKQLYKY 240 INFISKINKNILCIWNGYAMGGGLGISMYTQYRIINTNVIFSMPENKIGFFPDVGSSYFLKKYFSRNIALHLGLTSLRLN 320 EIDLINFKVCTNYIKNLDQFLNELYNIKKEDPNKFNEEFIKILNKYPPKVNVNAKPVLTEELISNIDKYYTSANNLEELI 400 NNLKKNEDNDNFCKQLLLDINANCYFSCQLWFSYFIYNYEKSMEEVLDNDFKMTQYFLYHTNTFEKGVTEILIKKNKNFQ 480 WIKDHENNPVQLEETIEDILMNKNLLSIKDEFI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PBANKA_1454400 8 FSSQYFK|LK 0.071 . PBANKA_1454400 10 SQYFKLK|KD 0.070 . PBANKA_1454400 11 QYFKLKK|DI 0.150 . PBANKA_1454400 17 KDISHIK|KL 0.068 . PBANKA_1454400 18 DISHIKK|LK 0.107 . PBANKA_1454400 20 SHIKKLK|WN 0.080 . PBANKA_1454400 25 LKWNEIK|FR 0.069 . PBANKA_1454400 27 WNEIKFR|DK 0.121 . PBANKA_1454400 29 EIKFRDK|NY 0.054 . PBANKA_1454400 40 TCANFEK|KK 0.069 . PBANKA_1454400 41 CANFEKK|KI 0.109 . PBANKA_1454400 42 ANFEKKK|IN 0.111 . PBANKA_1454400 46 KKKINVK|IL 0.062 . PBANKA_1454400 54 LVNCENK|AT 0.062 . PBANKA_1454400 57 CENKATK|SF 0.086 . PBANKA_1454400 61 ATKSFYK|YS 0.067 . PBANKA_1454400 80 EIENNHK|NV 0.064 . PBANKA_1454400 85 HKNVLSK|KM 0.072 . PBANKA_1454400 86 KNVLSKK|ME 0.121 . PBANKA_1454400 98 ENINMNK|RY 0.061 . PBANKA_1454400 99 NINMNKR|YI 0.290 . PBANKA_1454400 107 ISDECNK|GD 0.054 . PBANKA_1454400 112 NKGDLFR|KT 0.107 . PBANKA_1454400 113 KGDLFRK|TE 0.073 . PBANKA_1454400 116 LFRKTEK|DK 0.073 . PBANKA_1454400 118 RKTEKDK|NN 0.065 . PBANKA_1454400 124 KNNELDR|YN 0.103 . PBANKA_1454400 135 NMNDGIK|SK 0.069 . PBANKA_1454400 137 NDGIKSK|KS 0.060 . PBANKA_1454400 138 DGIKSKK|SN 0.168 . PBANKA_1454400 155 LSDVWSK|KT 0.062 . PBANKA_1454400 156 SDVWSKK|TL 0.109 . PBANKA_1454400 163 TLIVEYK|NN 0.068 . PBANKA_1454400 173 IEILLNR|KE 0.060 . PBANKA_1454400 174 EILLNRK|EK 0.060 . PBANKA_1454400 176 LLNRKEK|LN 0.159 . PBANKA_1454400 182 KLNAINK|DM 0.077 . PBANKA_1454400 193 GLLNMVK|SL 0.082 . PBANKA_1454400 200 SLSNDDR|CN 0.135 . PBANKA_1454400 207 CNLIVIR|SI 0.129 . PBANKA_1454400 221 CSGSDVK|DI 0.076 . PBANKA_1454400 227 KDIVQNK|DQ 0.076 . PBANKA_1454400 235 QGINHLK|QL 0.074 . PBANKA_1454400 239 HLKQLYK|YI 0.074 . PBANKA_1454400 246 YINFISK|IN 0.067 . PBANKA_1454400 249 FISKINK|NI 0.070 . PBANKA_1454400 273 SMYTQYR|II 0.094 . PBANKA_1454400 287 FSMPENK|IG 0.058 . PBANKA_1454400 301 GSSYFLK|KY 0.070 . PBANKA_1454400 302 SSYFLKK|YF 0.170 . PBANKA_1454400 306 LKKYFSR|NI 0.098 . PBANKA_1454400 318 LGLTSLR|LN 0.078 . PBANKA_1454400 328 IDLINFK|VC 0.054 . PBANKA_1454400 335 VCTNYIK|NL 0.067 . PBANKA_1454400 348 NELYNIK|KE 0.057 . PBANKA_1454400 349 ELYNIKK|ED 0.082 . PBANKA_1454400 354 KKEDPNK|FN 0.077 . PBANKA_1454400 361 FNEEFIK|IL 0.070 . PBANKA_1454400 365 FIKILNK|YP 0.060 . PBANKA_1454400 369 LNKYPPK|VN 0.063 . PBANKA_1454400 375 KVNVNAK|PV 0.108 . PBANKA_1454400 388 LISNIDK|YY 0.077 . PBANKA_1454400 404 ELINNLK|KN 0.059 . PBANKA_1454400 405 LINNLKK|NE 0.096 . PBANKA_1454400 414 DNDNFCK|QL 0.059 . PBANKA_1454400 441 FIYNYEK|SM 0.085 . PBANKA_1454400 452 VLDNDFK|MT 0.065 . PBANKA_1454400 466 HTNTFEK|GV 0.097 . PBANKA_1454400 474 VTEILIK|KN 0.055 . PBANKA_1454400 475 TEILIKK|NK 0.072 . PBANKA_1454400 477 ILIKKNK|NF 0.073 . PBANKA_1454400 483 KNFQWIK|DH 0.074 . PBANKA_1454400 503 EDILMNK|NL 0.058 . PBANKA_1454400 509 KNLLSIK|DE 0.067 . ____________________________^_________________

  • Fasta :-

    >PBANKA_1454400 ATGTTTTCATCTCAGTATTTCAAATTAAAAAAAGATATTTCACATATAAAAAAATTAAAA TGGAATGAAATAAAATTTAGAGATAAAAACTATTTGTTTACATGTGCAAACTTTGAAAAG AAAAAAATAAACGTGAAAATTTTGGTGAATTGTGAAAATAAAGCCACAAAAAGTTTCTAT AAGTATTCTAATAATAGTAATTTATATACTAATGTACAGGAAATAGAAAATAATCATAAA AACGTATTATCTAAAAAAATGGAAAATACAAATGAAAATATTAATATGAACAAGCGATAT ATATCTGACGAATGTAATAAAGGCGACCTTTTTAGGAAAACTGAAAAAGATAAAAATAAT GAATTAGATAGATATAATGTGGAAAATATGAATGATGGTATAAAATCAAAGAAGAGTAAC AGTGATGATATTATAGATCTAACCCTATCTGATGTATGGTCAAAAAAAACATTAATAGTA GAATATAAAAACAACATAATCGAAATATTGTTAAATAGGAAAGAAAAATTAAATGCTATA AATAAAGATATGATTAATGGATTATTAAATATGGTAAAAAGTTTAAGCAATGATGATAGA TGTAATTTGATAGTAATAAGAAGCATCAATCAAAATTGTTTTTGTTCGGGTTCAGATGTA AAAGATATAGTTCAGAATAAAGATCAAGGGATAAATCATTTAAAACAACTTTATAAGTAT ATTAATTTTATTTCAAAAATCAATAAAAATATATTATGCATATGGAATGGATATGCTATG GGTGGGGGATTAGGTATATCTATGTATACACAGTATCGAATCATAAATACAAATGTAATA TTTTCCATGCCAGAAAATAAAATAGGTTTTTTCCCTGATGTTGGAAGCTCTTATTTTTTA AAAAAATATTTTTCACGAAATATTGCTTTACACTTAGGATTAACATCATTGCGATTAAAT GAAATTGATTTAATTAATTTTAAAGTGTGCACTAACTATATAAAAAATCTAGACCAATTT TTGAATGAATTGTATAATATTAAAAAAGAAGACCCAAATAAATTTAATGAGGAATTTATT AAAATTTTAAATAAATACCCTCCAAAAGTTAATGTTAATGCAAAACCAGTATTAACAGAA GAATTAATTAGTAATATCGACAAATATTATACATCTGCCAACAATTTAGAGGAATTGATA AATAATTTAAAAAAAAATGAAGATAATGATAATTTTTGTAAACAATTATTATTAGATATA AACGCTAATTGCTATTTTAGCTGCCAGCTATGGTTCTCTTATTTTATATATAACTATGAA AAATCTATGGAAGAAGTATTAGATAACGATTTTAAAATGACTCAGTATTTTTTATATCAC ACTAATACATTTGAAAAGGGGGTAACTGAAATATTAATAAAAAAAAATAAAAACTTTCAG TGGATTAAGGACCATGAAAATAATCCTGTGCAATTGGAAGAAACTATTGAAGATATTTTG ATGAATAAAAATCTATTGTCTATTAAAGATGAATTTATATAA
  • Download Fasta

  • Fasta :-

    MFSSQYFKLKKDISHIKKLKWNEIKFRDKNYLFTCANFEKKKINVKILVNCENKATKSFY KYSNNSNLYTNVQEIENNHKNVLSKKMENTNENINMNKRYISDECNKGDLFRKTEKDKNN ELDRYNVENMNDGIKSKKSNSDDIIDLTLSDVWSKKTLIVEYKNNIIEILLNRKEKLNAI NKDMINGLLNMVKSLSNDDRCNLIVIRSINQNCFCSGSDVKDIVQNKDQGINHLKQLYKY INFISKINKNILCIWNGYAMGGGLGISMYTQYRIINTNVIFSMPENKIGFFPDVGSSYFL KKYFSRNIALHLGLTSLRLNEIDLINFKVCTNYIKNLDQFLNELYNIKKEDPNKFNEEFI KILNKYPPKVNVNAKPVLTEELISNIDKYYTSANNLEELINNLKKNEDNDNFCKQLLLDI NANCYFSCQLWFSYFIYNYEKSMEEVLDNDFKMTQYFLYHTNTFEKGVTEILIKKNKNFQ WIKDHENNPVQLEETIEDILMNKNLLSIKDEFI

  • title: substrate binding site
  • coordinates: L177,A179,N212,S216,G217,S218,D219,V220,Y258,M260,G261,G262,P284,E285,I288
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PBANKA_1454400507 SKNLLSIKDE0.994unspPBANKA_1454400507 SKNLLSIKDE0.994unspPBANKA_1454400507 SKNLLSIKDE0.994unspPBANKA_1454400102 SKRYISDECN0.995unspPBANKA_1454400139 SKSKKSNSDD0.997unsp

PBANKA_145440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India