PCHAS_0101000 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0101000OTHER0.9998770.0000470.000075
No Results

  • Fasta :-

    >PCHAS_0101000 MEGIESNNDELRSTALSKLDGNPKTDWFCNKNGLLLKTYGWLVTNAIGIILLIHGFKSHA RLTFMRINLKMPNNNEGIIVDTDNYYIYKDSWIEKFNQSGYSVYALDLQGHGESQSLGNL RGDINCFDDIVDDVIQYMNQIQDEISNDDQTDYEIPNDNQTDDDISSDDQTDYEISNDDQ TDYEIPNDNQTDDDISSDNQTGDEYHDIVPTKKKRLPMYIIGHSMGGNIALRILQLLGKA KENNINSGDANNYKNCNSILDNSTNINEIGNDVNNYNDYDSDNSCASTSATTNAITSASD KHEGYYNYLDKLNIKGCVSLSGMIIIKTFLNDESNSFKNVYLPIIDHMSNFMPHALIPSE FRFKISKYASNIYKHDKFRNNNGIKFKCMSELIKATITLDSDINYMPTDIPLLFVHSSDD SVCYYKGSVLFHGKAKVKKKNIYIVDDMNHDITIEPGNEEILKTIIDWISNLRSNDEGEI ENG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0101000.fa Sequence name : PCHAS_0101000 Sequence length : 483 VALUES OF COMPUTED PARAMETERS Coef20 : 3.537 CoefTot : 0.000 ChDiff : -35 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.588 1.688 0.148 0.755 MesoH : -0.715 0.084 -0.468 0.183 MuHd_075 : 14.583 12.397 3.824 4.172 MuHd_095 : 16.398 15.129 4.774 3.452 MuHd_100 : 17.111 11.109 3.271 2.745 MuHd_105 : 26.193 9.019 5.835 3.608 Hmax_075 : -9.333 -0.350 -4.640 0.817 Hmax_095 : -3.400 7.800 -2.117 1.580 Hmax_100 : -3.900 1.600 -3.046 1.270 Hmax_105 : -2.500 1.300 -2.352 1.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8804 0.1196 DFMC : 0.9378 0.0622
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 483 PCHAS_0101000 MEGIESNNDELRSTALSKLDGNPKTDWFCNKNGLLLKTYGWLVTNAIGIILLIHGFKSHARLTFMRINLKMPNNNEGIIV 80 DTDNYYIYKDSWIEKFNQSGYSVYALDLQGHGESQSLGNLRGDINCFDDIVDDVIQYMNQIQDEISNDDQTDYEIPNDNQ 160 TDDDISSDDQTDYEISNDDQTDYEIPNDNQTDDDISSDNQTGDEYHDIVPTKKKRLPMYIIGHSMGGNIALRILQLLGKA 240 KENNINSGDANNYKNCNSILDNSTNINEIGNDVNNYNDYDSDNSCASTSATTNAITSASDKHEGYYNYLDKLNIKGCVSL 320 SGMIIIKTFLNDESNSFKNVYLPIIDHMSNFMPHALIPSEFRFKISKYASNIYKHDKFRNNNGIKFKCMSELIKATITLD 400 SDINYMPTDIPLLFVHSSDDSVCYYKGSVLFHGKAKVKKKNIYIVDDMNHDITIEPGNEEILKTIIDWISNLRSNDEGEI 480 ENG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0101000 12 SNNDELR|ST 0.127 . PCHAS_0101000 18 RSTALSK|LD 0.064 . PCHAS_0101000 24 KLDGNPK|TD 0.058 . PCHAS_0101000 31 TDWFCNK|NG 0.058 . PCHAS_0101000 37 KNGLLLK|TY 0.067 . PCHAS_0101000 57 LLIHGFK|SH 0.072 . PCHAS_0101000 61 GFKSHAR|LT 0.096 . PCHAS_0101000 66 ARLTFMR|IN 0.094 . PCHAS_0101000 70 FMRINLK|MP 0.060 . PCHAS_0101000 89 DNYYIYK|DS 0.073 . PCHAS_0101000 95 KDSWIEK|FN 0.079 . PCHAS_0101000 121 QSLGNLR|GD 0.094 . PCHAS_0101000 212 HDIVPTK|KK 0.062 . PCHAS_0101000 213 DIVPTKK|KR 0.072 . PCHAS_0101000 214 IVPTKKK|RL 0.097 . PCHAS_0101000 215 VPTKKKR|LP 0.184 . PCHAS_0101000 232 GGNIALR|IL 0.083 . PCHAS_0101000 239 ILQLLGK|AK 0.068 . PCHAS_0101000 241 QLLGKAK|EN 0.065 . PCHAS_0101000 254 GDANNYK|NC 0.073 . PCHAS_0101000 301 ITSASDK|HE 0.071 . PCHAS_0101000 311 YYNYLDK|LN 0.067 . PCHAS_0101000 315 LDKLNIK|GC 0.059 . PCHAS_0101000 327 SGMIIIK|TF 0.061 . PCHAS_0101000 338 DESNSFK|NV 0.076 . PCHAS_0101000 362 LIPSEFR|FK 0.084 . PCHAS_0101000 364 PSEFRFK|IS 0.059 . PCHAS_0101000 367 FRFKISK|YA 0.089 . PCHAS_0101000 374 YASNIYK|HD 0.065 . PCHAS_0101000 377 NIYKHDK|FR 0.069 . PCHAS_0101000 379 YKHDKFR|NN 0.111 . PCHAS_0101000 385 RNNNGIK|FK 0.079 . PCHAS_0101000 387 NNGIKFK|CM 0.080 . PCHAS_0101000 394 CMSELIK|AT 0.071 . PCHAS_0101000 426 DSVCYYK|GS 0.055 . PCHAS_0101000 434 SVLFHGK|AK 0.061 . PCHAS_0101000 436 LFHGKAK|VK 0.070 . PCHAS_0101000 438 HGKAKVK|KK 0.068 . PCHAS_0101000 439 GKAKVKK|KN 0.151 . PCHAS_0101000 440 KAKVKKK|NI 0.181 . PCHAS_0101000 463 GNEEILK|TI 0.071 . PCHAS_0101000 473 DWISNLR|SN 0.126 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0101000 ATGGAAGGAATTGAATCCAATAATGATGAATTAAGAAGTACTGCACTAAGTAAATTAGAT GGCAATCCTAAGACAGATTGGTTCTGTAATAAAAATGGTTTACTTTTAAAAACATATGGG TGGCTAGTTACAAATGCTATAGGAATTATATTGCTAATTCATGGATTCAAATCTCATGCT CGATTAACTTTTATGAGAATAAATTTAAAAATGCCAAATAACAATGAAGGCATAATAGTA GATACTGATAATTACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAGTGGT TATTCAGTATATGCACTAGATTTGCAAGGACATGGCGAATCACAATCATTGGGAAATTTA AGAGGCGATATTAATTGCTTTGATGATATAGTTGATGATGTAATACAATATATGAATCAA ATTCAAGATGAAATTTCAAATGATGATCAAACGGATTATGAAATTCCAAATGATAATCAA ACGGATGATGATATCTCAAGTGATGATCAAACGGATTATGAAATTTCAAATGACGATCAA ACGGATTATGAAATTCCAAATGATAATCAAACGGATGATGATATCTCAAGTGATAATCAA ACAGGTGATGAATATCATGATATAGTACCAACCAAAAAAAAAAGGCTTCCTATGTATATT ATTGGGCACTCGATGGGAGGAAATATTGCTTTAAGAATATTACAATTATTAGGGAAAGCA AAAGAAAATAACATTAATTCTGGAGATGCAAATAACTACAAAAACTGTAACAGCATATTA GACAATTCTACTAATATTAATGAAATTGGCAATGATGTGAATAATTATAATGATTATGAT TCCGATAATTCCTGTGCTAGTACCTCTGCTACGACAAATGCTATTACTAGCGCCAGTGAT AAACATGAAGGATACTATAATTATTTAGATAAATTAAATATTAAAGGTTGCGTATCTTTA TCTGGTATGATAATAATAAAAACATTTTTGAATGATGAAAGCAATTCATTTAAGAATGTT TATTTGCCTATAATAGATCACATGTCTAATTTCATGCCTCATGCACTAATTCCATCAGAA TTTCGCTTTAAAATATCCAAATATGCTTCTAATATATATAAGCATGATAAATTTCGAAAT AATAATGGAATAAAATTTAAGTGTATGTCTGAACTAATAAAAGCAACGATCACGTTGGAC AGTGATATTAATTATATGCCAACAGATATTCCTTTATTATTTGTGCATTCAAGCGATGAC AGTGTTTGTTATTATAAAGGATCAGTATTGTTTCATGGTAAAGCAAAAGTTAAAAAAAAA AATATATATATTGTTGATGATATGAACCATGATATAACGATAGAGCCAGGAAATGAAGAA ATTTTAAAAACAATTATTGATTGGATTAGTAATTTAAGAAGCAATGATGAAGGCGAAATA GAAAATGGATAA
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  • Fasta :-

    MEGIESNNDELRSTALSKLDGNPKTDWFCNKNGLLLKTYGWLVTNAIGIILLIHGFKSHA RLTFMRINLKMPNNNEGIIVDTDNYYIYKDSWIEKFNQSGYSVYALDLQGHGESQSLGNL RGDINCFDDIVDDVIQYMNQIQDEISNDDQTDYEIPNDNQTDDDISSDDQTDYEISNDDQ TDYEIPNDNQTDDDISSDNQTGDEYHDIVPTKKKRLPMYIIGHSMGGNIALRILQLLGKA KENNINSGDANNYKNCNSILDNSTNINEIGNDVNNYNDYDSDNSCASTSATTNAITSASD KHEGYYNYLDKLNIKGCVSLSGMIIIKTFLNDESNSFKNVYLPIIDHMSNFMPHALIPSE FRFKISKYASNIYKHDKFRNNNGIKFKCMSELIKATITLDSDINYMPTDIPLLFVHSSDD SVCYYKGSVLFHGKAKVKKKNIYIVDDMNHDITIEPGNEEILKTIIDWISNLRSNDEGEI ENG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0101000166 SDDDISSDDQ0.996unspPCHAS_0101000166 SDDDISSDDQ0.996unspPCHAS_0101000166 SDDDISSDDQ0.996unspPCHAS_010100017 SSTALSKLDG0.99unspPCHAS_0101000146 SQDEISNDDQ0.991unsp

PCHAS_010100      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India