PCHAS_0211200 | alpha/beta hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0211200OTHER0.9987170.0004540.000828
No Results

  • Fasta :-

    >PCHAS_0211200 MGGALSSTALFRPTSPSYEDDLKNLIYIPELLHINPSKYLENKQFEIFNKDENINELSKS KFPALFFYYSKKLKTKHTVMYFHSNSCDLGQIYEELYTLHEFLHINILAIEYVGFGLSYL EGSPNQYNINRRALAAYHFLKSLNLNPENIILFGRSIGTGVATKLAHNVKLMGDNIGGII LHSPYISIEKLVEDYVSYSSYLIENIYDNFKNLTPLSNNDDSDAPFLLIHGKDDEVINIS HSEYLIKNLNNKFKSSFYPEDSSHNCYYIIDDIAIPTKKFLCTLSKSRHQKKTEILLSLS YLRKELAIFEIRKFGYKKKGQKNIIYISNMYNDACVRKIHKMKKKLCKKIKKLNKKYKLN ELGKEEINNNTVIENSVKGYAEMYNNKINKDDNFPNLDTTQTIEDTDNSYTDQTFTDIDS KSSSYTNYYEYNENLDTKHRVRDIISFFNNKCFKNTQKNDNINNKPNCIRAYSNCHLDEK PTNYNDSCASDYFSEIEEKQRNLSDSDLVNKKYHNVLYQKKKDGYKSSVLYYNFKNSIHN KFVTNITQYSDDIKRECNANI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0211200.fa Sequence name : PCHAS_0211200 Sequence length : 561 VALUES OF COMPUTED PARAMETERS Coef20 : 3.709 CoefTot : -0.054 ChDiff : 7 ZoneTo : 18 KR : 1 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.894 1.376 0.017 0.632 MesoH : -0.517 0.345 -0.392 0.260 MuHd_075 : 18.683 16.963 4.436 4.591 MuHd_095 : 11.218 2.345 2.748 2.486 MuHd_100 : 10.816 2.287 2.536 1.875 MuHd_105 : 14.320 6.189 2.683 2.317 Hmax_075 : 16.217 12.483 1.841 4.293 Hmax_095 : 11.025 6.737 0.980 3.238 Hmax_100 : 10.400 5.200 0.889 3.430 Hmax_105 : 11.500 5.700 1.156 2.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7186 0.2814 DFMC : 0.7403 0.2597
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 561 PCHAS_0211200 MGGALSSTALFRPTSPSYEDDLKNLIYIPELLHINPSKYLENKQFEIFNKDENINELSKSKFPALFFYYSKKLKTKHTVM 80 YFHSNSCDLGQIYEELYTLHEFLHINILAIEYVGFGLSYLEGSPNQYNINRRALAAYHFLKSLNLNPENIILFGRSIGTG 160 VATKLAHNVKLMGDNIGGIILHSPYISIEKLVEDYVSYSSYLIENIYDNFKNLTPLSNNDDSDAPFLLIHGKDDEVINIS 240 HSEYLIKNLNNKFKSSFYPEDSSHNCYYIIDDIAIPTKKFLCTLSKSRHQKKTEILLSLSYLRKELAIFEIRKFGYKKKG 320 QKNIIYISNMYNDACVRKIHKMKKKLCKKIKKLNKKYKLNELGKEEINNNTVIENSVKGYAEMYNNKINKDDNFPNLDTT 400 QTIEDTDNSYTDQTFTDIDSKSSSYTNYYEYNENLDTKHRVRDIISFFNNKCFKNTQKNDNINNKPNCIRAYSNCHLDEK 480 PTNYNDSCASDYFSEIEEKQRNLSDSDLVNKKYHNVLYQKKKDGYKSSVLYYNFKNSIHNKFVTNITQYSDDIKRECNAN 560 I 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 . 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0211200 12 SSTALFR|PT 0.118 . PCHAS_0211200 23 SYEDDLK|NL 0.059 . PCHAS_0211200 38 LHINPSK|YL 0.089 . PCHAS_0211200 43 SKYLENK|QF 0.073 . PCHAS_0211200 50 QFEIFNK|DE 0.075 . PCHAS_0211200 59 NINELSK|SK 0.086 . PCHAS_0211200 61 NELSKSK|FP 0.057 . PCHAS_0211200 71 LFFYYSK|KL 0.063 . PCHAS_0211200 72 FFYYSKK|LK 0.102 . PCHAS_0211200 74 YYSKKLK|TK 0.078 . PCHAS_0211200 76 SKKLKTK|HT 0.080 . PCHAS_0211200 131 NQYNINR|RA 0.097 . PCHAS_0211200 132 QYNINRR|AL 0.157 . PCHAS_0211200 141 AAYHFLK|SL 0.083 . PCHAS_0211200 155 NIILFGR|SI 0.264 . PCHAS_0211200 164 GTGVATK|LA 0.070 . PCHAS_0211200 170 KLAHNVK|LM 0.080 . PCHAS_0211200 190 PYISIEK|LV 0.071 . PCHAS_0211200 211 NIYDNFK|NL 0.058 . PCHAS_0211200 232 FLLIHGK|DD 0.079 . PCHAS_0211200 247 HSEYLIK|NL 0.074 . PCHAS_0211200 252 IKNLNNK|FK 0.070 . PCHAS_0211200 254 NLNNKFK|SS 0.125 . PCHAS_0211200 278 DIAIPTK|KF 0.058 . PCHAS_0211200 279 IAIPTKK|FL 0.109 . PCHAS_0211200 286 FLCTLSK|SR 0.077 . PCHAS_0211200 288 CTLSKSR|HQ 0.076 . PCHAS_0211200 291 SKSRHQK|KT 0.283 . PCHAS_0211200 292 KSRHQKK|TE 0.090 . PCHAS_0211200 303 LSLSYLR|KE 0.069 . PCHAS_0211200 304 SLSYLRK|EL 0.097 . PCHAS_0211200 312 LAIFEIR|KF 0.090 . PCHAS_0211200 313 AIFEIRK|FG 0.086 . PCHAS_0211200 317 IRKFGYK|KK 0.074 . PCHAS_0211200 318 RKFGYKK|KG 0.093 . PCHAS_0211200 319 KFGYKKK|GQ 0.132 . PCHAS_0211200 322 YKKKGQK|NI 0.066 . PCHAS_0211200 337 YNDACVR|KI 0.084 . PCHAS_0211200 338 NDACVRK|IH 0.081 . PCHAS_0211200 341 CVRKIHK|MK 0.058 . PCHAS_0211200 343 RKIHKMK|KK 0.065 . PCHAS_0211200 344 KIHKMKK|KL 0.158 . PCHAS_0211200 345 IHKMKKK|LC 0.116 . PCHAS_0211200 348 MKKKLCK|KI 0.073 . PCHAS_0211200 349 KKKLCKK|IK 0.075 . PCHAS_0211200 351 KLCKKIK|KL 0.077 . PCHAS_0211200 352 LCKKIKK|LN 0.089 . PCHAS_0211200 355 KIKKLNK|KY 0.062 . PCHAS_0211200 356 IKKLNKK|YK 0.112 . PCHAS_0211200 358 KLNKKYK|LN 0.088 . PCHAS_0211200 364 KLNELGK|EE 0.064 . PCHAS_0211200 378 VIENSVK|GY 0.064 . PCHAS_0211200 387 AEMYNNK|IN 0.057 . PCHAS_0211200 390 YNNKINK|DD 0.069 . PCHAS_0211200 421 FTDIDSK|SS 0.067 . PCHAS_0211200 438 NENLDTK|HR 0.062 . PCHAS_0211200 440 NLDTKHR|VR 0.074 . PCHAS_0211200 442 DTKHRVR|DI 0.111 . PCHAS_0211200 451 ISFFNNK|CF 0.058 . PCHAS_0211200 454 FNNKCFK|NT 0.071 . PCHAS_0211200 458 CFKNTQK|ND 0.058 . PCHAS_0211200 465 NDNINNK|PN 0.065 . PCHAS_0211200 470 NKPNCIR|AY 0.096 . PCHAS_0211200 480 NCHLDEK|PT 0.062 . PCHAS_0211200 499 FSEIEEK|QR 0.057 . PCHAS_0211200 501 EIEEKQR|NL 0.095 . PCHAS_0211200 511 DSDLVNK|KY 0.068 . PCHAS_0211200 512 SDLVNKK|YH 0.081 . PCHAS_0211200 520 HNVLYQK|KK 0.061 . PCHAS_0211200 521 NVLYQKK|KD 0.086 . PCHAS_0211200 522 VLYQKKK|DG 0.122 . PCHAS_0211200 526 KKKDGYK|SS 0.068 . PCHAS_0211200 535 VLYYNFK|NS 0.061 . PCHAS_0211200 541 KNSIHNK|FV 0.140 . PCHAS_0211200 554 QYSDDIK|RE 0.061 . PCHAS_0211200 555 YSDDIKR|EC 0.144 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0211200 ATGGGAGGTGCTTTATCCAGTACAGCCTTATTTCGTCCTACTTCGCCAAGTTACGAAGAT GATTTGAAAAATTTAATTTATATCCCAGAGCTTTTGCACATAAATCCAAGTAAATATTTG GAAAATAAACAATTCGAGATATTTAATAAAGATGAAAATATAAACGAGTTAAGTAAAAGC AAATTCCCAGCTTTATTTTTTTATTACTCCAAAAAGTTAAAAACTAAGCATACGGTTATG TATTTTCATAGTAACTCCTGTGATTTAGGGCAAATTTATGAAGAGTTATATACTTTACAT GAATTTTTACACATTAATATATTAGCTATAGAATATGTTGGGTTTGGTTTATCCTATTTA GAAGGTTCACCCAATCAGTATAATATTAATAGAAGAGCATTAGCTGCTTATCATTTTTTA AAATCATTAAATTTAAACCCTGAGAATATAATACTATTTGGTAGATCTATAGGTACTGGT GTGGCTACTAAATTAGCTCATAATGTAAAACTTATGGGCGATAATATAGGAGGAATTATA TTACATTCTCCATATATATCAATTGAAAAGTTAGTAGAAGATTATGTCTCATATTCTTCA TATCTAATTGAAAATATATATGACAATTTTAAAAATCTAACACCCCTTAGCAATAATGAT GATTCAGATGCTCCATTCTTACTTATACACGGTAAAGATGATGAAGTAATAAATATATCT CATTCCGAATATTTAATAAAAAATTTAAATAATAAATTTAAGTCTTCCTTTTATCCTGAA GACTCTTCTCACAACTGTTACTATATCATTGATGACATCGCTATACCCACAAAGAAATTT CTTTGCACCCTCAGTAAATCACGTCATCAAAAAAAGACAGAAATACTATTATCGCTATCT TATCTAAGAAAAGAGCTAGCAATATTTGAAATAAGAAAATTTGGTTATAAAAAAAAAGGA CAAAAAAACATAATATATATAAGCAATATGTACAATGATGCATGTGTAAGGAAAATCCAT AAAATGAAAAAAAAATTATGCAAAAAAATTAAAAAGCTAAATAAAAAATATAAGTTAAAT GAACTAGGAAAAGAAGAAATAAACAATAACACCGTAATTGAAAATAGTGTCAAAGGATAT GCTGAAATGTATAATAATAAAATCAACAAAGATGATAATTTTCCAAATTTAGACACAACA CAAACTATTGAAGATACAGACAATTCTTATACCGACCAAACATTTACAGATATCGATAGC AAATCCTCATCCTATACAAATTATTACGAATATAATGAAAACCTAGATACTAAACATCGG GTTCGTGATATAATATCTTTTTTTAATAATAAATGTTTTAAAAATACACAAAAAAATGAT AATATAAATAATAAACCGAATTGCATTAGAGCCTATTCAAATTGTCATTTAGATGAAAAA CCAACAAATTATAATGATTCATGTGCATCTGACTATTTTAGTGAAATAGAAGAAAAACAA AGAAATCTTTCTGATTCTGATCTAGTTAATAAAAAATATCATAATGTCTTATATCAAAAA AAAAAAGATGGATATAAATCAAGTGTATTATATTATAACTTTAAAAATAGTATACACAAC AAATTTGTTACTAATATAACACAATATTCAGATGATATAAAAAGAGAATGCAACGCAAAT ATATAA
  • Download Fasta

  • Fasta :-

    MGGALSSTALFRPTSPSYEDDLKNLIYIPELLHINPSKYLENKQFEIFNKDENINELSKS KFPALFFYYSKKLKTKHTVMYFHSNSCDLGQIYEELYTLHEFLHINILAIEYVGFGLSYL EGSPNQYNINRRALAAYHFLKSLNLNPENIILFGRSIGTGVATKLAHNVKLMGDNIGGII LHSPYISIEKLVEDYVSYSSYLIENIYDNFKNLTPLSNNDDSDAPFLLIHGKDDEVINIS HSEYLIKNLNNKFKSSFYPEDSSHNCYYIIDDIAIPTKKFLCTLSKSRHQKKTEILLSLS YLRKELAIFEIRKFGYKKKGQKNIIYISNMYNDACVRKIHKMKKKLCKKIKKLNKKYKLN ELGKEEINNNTVIENSVKGYAEMYNNKINKDDNFPNLDTTQTIEDTDNSYTDQTFTDIDS KSSSYTNYYEYNENLDTKHRVRDIISFFNNKCFKNTQKNDNINNKPNCIRAYSNCHLDEK PTNYNDSCASDYFSEIEEKQRNLSDSDLVNKKYHNVLYQKKKDGYKSSVLYYNFKNSIHN KFVTNITQYSDDIKRECNANI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0211200409 SDTDNSYTDQ0.995unspPCHAS_0211200409 SDTDNSYTDQ0.995unspPCHAS_0211200409 SDTDNSYTDQ0.995unspPCHAS_0211200494 SSDYFSEIEE0.994unspPCHAS_0211200504 SQRNLSDSDL0.997unspPCHAS_021120015 SFRPTSPSYE0.99unspPCHAS_021120017 SPTSPSYEDD0.998unsp

PCHAS_021120      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India