PCHAS_0306900 | serine repeat antigen 5, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0306900SP0.0660710.9338390.000090CS pos: 24-25. AKS-KI. Pr: 0.9555
No Results

  • Fasta :-

    >PCHAS_0306900 MKTYKIKYFLLISLFINLIKQAKSKIVISCFGKQHCKICHVIIRNCFLSGTSNLQKCIAC EESYYNTRQCIRQEGSLFNNKENNALLELKDESLQDSISEDSLDGLVSSILDIAMLRYKN KTTDAGSMDDDYKTKIDNLCLYLNFKDNYENAEKHDQTDAEHVETHIQHIIQMFIHANDN MEHMRNALKNPALCFQNPAEWVQDRLGYKENAEIPSVGVIPEKKLFKPHKHSSLMNSLYN PNSKCNRKYCNRFADPNECEHNIRPLNQGTCGNCWAFASSTTISAFRCRKGLGFAEPSIK YVTLCKNKYLVDEEPPVFGHYNDNICHEGGHLSSYIEILDLSKMLPTSFDVPYNEPIKGG DCPTEVSTWGNLWNGVTALDKILNGYIYKGYFKISFLDYTQAGKTNELINILKDYIIEQG AIFVSMEISKKLSFDHDGEQVMMNCEYGEAPDHALVLIGFGDYIKSSGEKSSYWLIRNSW GSRWGDNGNFKMDMYGPRNCNGRVLFNAFPLLLKMTENNISKPLPNDMSSTDVKIRYNHS DFTKNKKNKTSQRDRNRKVTPNSYDDPYDINPRTVDPSNNNQNDYVNPYYNPDYNPIDNN DRQNNDRHPPFRDSEYDPAYPSMNNNRRFDPNDIINHRNRLRRIFQTDLTVTIGNFVYKR NIYSKRKNEYMEEFSCLRTYSMDTNLDNICRENCEKHIDTCMHSTVIGECLSRNAPNYKC IYCGM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0306900.fa Sequence name : PCHAS_0306900 Sequence length : 725 VALUES OF COMPUTED PARAMETERS Coef20 : 4.327 CoefTot : -1.467 ChDiff : -3 ZoneTo : 60 KR : 10 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.341 1.394 0.172 0.524 MesoH : -0.713 0.262 -0.374 0.217 MuHd_075 : 25.947 23.000 8.706 6.665 MuHd_095 : 38.973 26.489 12.055 9.484 MuHd_100 : 38.626 24.521 12.520 9.904 MuHd_105 : 32.541 21.340 11.258 7.781 Hmax_075 : 19.133 19.367 5.077 6.883 Hmax_095 : 15.487 25.200 4.562 6.816 Hmax_100 : 14.600 19.800 5.331 6.390 Hmax_105 : 14.700 19.900 1.631 4.293 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1036 0.8964 DFMC : 0.0718 0.9282 This protein is probably imported in mitochondria. f(Ser) = 0.0833 f(Arg) = 0.0167 CMi = 0.89286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 725 PCHAS_0306900 MKTYKIKYFLLISLFINLIKQAKSKIVISCFGKQHCKICHVIIRNCFLSGTSNLQKCIACEESYYNTRQCIRQEGSLFNN 80 KENNALLELKDESLQDSISEDSLDGLVSSILDIAMLRYKNKTTDAGSMDDDYKTKIDNLCLYLNFKDNYENAEKHDQTDA 160 EHVETHIQHIIQMFIHANDNMEHMRNALKNPALCFQNPAEWVQDRLGYKENAEIPSVGVIPEKKLFKPHKHSSLMNSLYN 240 PNSKCNRKYCNRFADPNECEHNIRPLNQGTCGNCWAFASSTTISAFRCRKGLGFAEPSIKYVTLCKNKYLVDEEPPVFGH 320 YNDNICHEGGHLSSYIEILDLSKMLPTSFDVPYNEPIKGGDCPTEVSTWGNLWNGVTALDKILNGYIYKGYFKISFLDYT 400 QAGKTNELINILKDYIIEQGAIFVSMEISKKLSFDHDGEQVMMNCEYGEAPDHALVLIGFGDYIKSSGEKSSYWLIRNSW 480 GSRWGDNGNFKMDMYGPRNCNGRVLFNAFPLLLKMTENNISKPLPNDMSSTDVKIRYNHSDFTKNKKNKTSQRDRNRKVT 560 PNSYDDPYDINPRTVDPSNNNQNDYVNPYYNPDYNPIDNNDRQNNDRHPPFRDSEYDPAYPSMNNNRRFDPNDIINHRNR 640 LRRIFQTDLTVTIGNFVYKRNIYSKRKNEYMEEFSCLRTYSMDTNLDNICRENCEKHIDTCMHSTVIGECLSRNAPNYKC 720 IYCGM 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ..P............................................................................. 720 ..... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0306900 2 -----MK|TY 0.064 . PCHAS_0306900 5 --MKTYK|IK 0.063 . PCHAS_0306900 7 MKTYKIK|YF 0.065 . PCHAS_0306900 20 LFINLIK|QA 0.067 . PCHAS_0306900 23 NLIKQAK|SK 0.083 . PCHAS_0306900 25 IKQAKSK|IV 0.092 . PCHAS_0306900 33 VISCFGK|QH 0.074 . PCHAS_0306900 37 FGKQHCK|IC 0.067 . PCHAS_0306900 44 ICHVIIR|NC 0.108 . PCHAS_0306900 56 GTSNLQK|CI 0.076 . PCHAS_0306900 68 ESYYNTR|QC 0.103 . PCHAS_0306900 72 NTRQCIR|QE 0.088 . PCHAS_0306900 81 GSLFNNK|EN 0.060 . PCHAS_0306900 90 NALLELK|DE 0.062 . PCHAS_0306900 117 LDIAMLR|YK 0.083 . PCHAS_0306900 119 IAMLRYK|NK 0.061 . PCHAS_0306900 121 MLRYKNK|TT 0.094 . PCHAS_0306900 133 SMDDDYK|TK 0.062 . PCHAS_0306900 135 DDDYKTK|ID 0.060 . PCHAS_0306900 146 CLYLNFK|DN 0.064 . PCHAS_0306900 154 NYENAEK|HD 0.058 . PCHAS_0306900 185 DNMEHMR|NA 0.106 . PCHAS_0306900 189 HMRNALK|NP 0.056 . PCHAS_0306900 205 AEWVQDR|LG 0.087 . PCHAS_0306900 209 QDRLGYK|EN 0.062 . PCHAS_0306900 223 VGVIPEK|KL 0.064 . PCHAS_0306900 224 GVIPEKK|LF 0.097 . PCHAS_0306900 227 PEKKLFK|PH 0.059 . PCHAS_0306900 230 KLFKPHK|HS 0.074 . PCHAS_0306900 244 LYNPNSK|CN 0.065 . PCHAS_0306900 247 PNSKCNR|KY 0.100 . PCHAS_0306900 248 NSKCNRK|YC 0.079 . PCHAS_0306900 252 NRKYCNR|FA 0.184 . PCHAS_0306900 264 ECEHNIR|PL 0.104 . PCHAS_0306900 287 TTISAFR|CR 0.083 . PCHAS_0306900 289 ISAFRCR|KG 0.076 . PCHAS_0306900 290 SAFRCRK|GL 0.393 . PCHAS_0306900 300 FAEPSIK|YV 0.070 . PCHAS_0306900 306 KYVTLCK|NK 0.056 . PCHAS_0306900 308 VTLCKNK|YL 0.069 . PCHAS_0306900 343 EILDLSK|ML 0.059 . PCHAS_0306900 358 PYNEPIK|GG 0.060 . PCHAS_0306900 381 GVTALDK|IL 0.060 . PCHAS_0306900 389 LNGYIYK|GY 0.070 . PCHAS_0306900 393 IYKGYFK|IS 0.056 . PCHAS_0306900 404 DYTQAGK|TN 0.055 . PCHAS_0306900 413 ELINILK|DY 0.071 . PCHAS_0306900 430 VSMEISK|KL 0.065 . PCHAS_0306900 431 SMEISKK|LS 0.094 . PCHAS_0306900 465 GFGDYIK|SS 0.076 . PCHAS_0306900 470 IKSSGEK|SS 0.088 . PCHAS_0306900 477 SSYWLIR|NS 0.136 . PCHAS_0306900 483 RNSWGSR|WG 0.115 . PCHAS_0306900 491 GDNGNFK|MD 0.072 . PCHAS_0306900 498 MDMYGPR|NC 0.082 . PCHAS_0306900 503 PRNCNGR|VL 0.126 . PCHAS_0306900 514 AFPLLLK|MT 0.058 . PCHAS_0306900 522 TENNISK|PL 0.066 . PCHAS_0306900 534 MSSTDVK|IR 0.065 . PCHAS_0306900 536 STDVKIR|YN 0.102 . PCHAS_0306900 544 NHSDFTK|NK 0.070 . PCHAS_0306900 546 SDFTKNK|KN 0.072 . PCHAS_0306900 547 DFTKNKK|NK 0.083 . PCHAS_0306900 549 TKNKKNK|TS 0.080 . PCHAS_0306900 553 KNKTSQR|DR 0.112 . PCHAS_0306900 555 KTSQRDR|NR 0.085 . PCHAS_0306900 557 SQRDRNR|KV 0.123 . PCHAS_0306900 558 QRDRNRK|VT 0.220 . PCHAS_0306900 573 PYDINPR|TV 0.113 . PCHAS_0306900 602 PIDNNDR|QN 0.077 . PCHAS_0306900 607 DRQNNDR|HP 0.078 . PCHAS_0306900 612 DRHPPFR|DS 0.159 . PCHAS_0306900 627 PSMNNNR|RF 0.090 . PCHAS_0306900 628 SMNNNRR|FD 0.140 . PCHAS_0306900 638 NDIINHR|NR 0.071 . PCHAS_0306900 640 IINHRNR|LR 0.096 . PCHAS_0306900 642 NHRNRLR|RI 0.099 . PCHAS_0306900 643 HRNRLRR|IF 0.600 *ProP* PCHAS_0306900 659 IGNFVYK|RN 0.067 . PCHAS_0306900 660 GNFVYKR|NI 0.218 . PCHAS_0306900 665 KRNIYSK|RK 0.074 . PCHAS_0306900 666 RNIYSKR|KN 0.265 . PCHAS_0306900 667 NIYSKRK|NE 0.084 . PCHAS_0306900 678 EEFSCLR|TY 0.067 . PCHAS_0306900 691 NLDNICR|EN 0.079 . PCHAS_0306900 696 CRENCEK|HI 0.083 . PCHAS_0306900 713 IGECLSR|NA 0.074 . PCHAS_0306900 719 RNAPNYK|CI 0.079 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0306900 ATGAAAACATATAAAATTAAATATTTTCTTTTGATAAGTTTGTTTATCAATCTGATAAAA CAAGCGAAATCAAAAATTGTAATAAGTTGCTTTGGAAAACAGCATTGTAAGATATGCCAC GTAATCATAAGAAATTGTTTTTTATCTGGAACAAGTAATTTACAAAAATGTATAGCTTGT GAAGAAAGCTACTATAATACTAGACAATGCATAAGACAGGAAGGAAGCCTTTTCAACAAC AAAGAAAATAATGCACTTTTGGAGCTAAAGGATGAAAGCTTACAAGATAGCATTTCAGAG GACAGCTTAGATGGATTAGTGTCCAGCATATTAGATATAGCCATGTTGAGATACAAGAAT AAAACAACAGATGCAGGCAGTATGGATGATGATTATAAAACGAAGATAGATAATTTATGT TTGTATTTAAATTTTAAGGATAATTATGAAAATGCAGAAAAACATGATCAAACAGATGCT GAACATGTAGAAACTCATATACAACATATTATACAAATGTTTATTCATGCTAATGATAAT ATGGAGCATATGCGAAATGCATTAAAAAATCCAGCGCTTTGTTTTCAAAACCCAGCAGAA TGGGTTCAAGATAGATTAGGATACAAAGAAAATGCTGAAATCCCTTCAGTAGGTGTAATA CCAGAAAAAAAATTATTTAAACCACATAAACATAGTTCATTAATGAACTCGTTATATAAT CCTAACTCAAAATGCAACAGAAAATACTGTAATCGATTTGCTGATCCGAATGAGTGTGAA CATAATATAAGACCTCTCAATCAGGGAACATGCGGAAATTGCTGGGCCTTTGCATCTTCA ACTACGATATCTGCATTTAGATGCAGAAAGGGACTCGGGTTCGCAGAACCTTCAATAAAG TATGTAACCTTGTGTAAAAACAAATATTTGGTAGACGAAGAACCTCCAGTGTTTGGGCAT TATAATGATAATATATGTCATGAAGGTGGACATCTTTCATCATATATAGAAATTTTAGAT TTATCTAAAATGCTTCCAACTTCTTTTGATGTTCCATATAATGAACCAATAAAAGGTGGG GATTGTCCTACTGAAGTTAGTACATGGGGAAATTTATGGAATGGCGTAACCGCATTAGAT AAAATCTTGAATGGCTATATATACAAAGGATATTTTAAAATATCTTTTCTAGATTATACA CAAGCAGGTAAGACAAATGAATTAATCAATATTTTAAAAGATTATATAATTGAACAAGGT GCTATATTTGTTTCTATGGAGATTTCAAAAAAATTAAGTTTCGATCATGATGGTGAACAA GTTATGATGAATTGTGAATATGGTGAAGCACCTGATCATGCATTAGTTTTAATTGGTTTT GGCGATTATATAAAAAGTTCCGGAGAAAAAAGTTCTTATTGGTTAATAAGAAATAGTTGG GGTTCACGATGGGGTGATAATGGAAATTTTAAAATGGATATGTATGGTCCAAGAAATTGT AATGGTAGAGTTTTATTTAATGCATTTCCATTATTATTAAAAATGACAGAAAATAATATT TCAAAACCTTTACCTAATGATATGTCATCTACTGATGTAAAAATAAGATATAATCATTCC GATTTTACTAAAAATAAAAAAAATAAAACTAGCCAAAGAGATAGAAATAGAAAAGTAACT CCAAATAGTTATGATGATCCATATGATATTAATCCTAGGACAGTAGATCCATCAAATAAT AATCAAAACGATTATGTTAATCCATACTATAATCCAGATTATAATCCAATAGATAATAAT GATAGACAAAATAATGATCGACATCCCCCTTTTAGAGATTCGGAATATGATCCTGCTTAT CCAAGTATGAATAATAATCGAAGATTTGATCCTAACGATATAATTAACCATCGAAATAGG CTAAGAAGAATTTTCCAAACGGATTTAACCGTGACGATAGGCAACTTTGTATACAAAAGG AATATCTATTCGAAAAGGAAAAACGAGTACATGGAGGAGTTCTCGTGCCTCCGAACCTAT TCAATGGATACGAATTTAGATAATATATGTCGAGAAAATTGTGAAAAACATATCGACACA TGTATGCATAGTACAGTTATCGGAGAATGCCTAAGTAGGAATGCACCAAATTATAAATGC ATTTATTGTGGAATGTGA
  • Download Fasta

  • Fasta :-

    MKTYKIKYFLLISLFINLIKQAKSKIVISCFGKQHCKICHVIIRNCFLSGTSNLQKCIAC EESYYNTRQCIRQEGSLFNNKENNALLELKDESLQDSISEDSLDGLVSSILDIAMLRYKN KTTDAGSMDDDYKTKIDNLCLYLNFKDNYENAEKHDQTDAEHVETHIQHIIQMFIHANDN MEHMRNALKNPALCFQNPAEWVQDRLGYKENAEIPSVGVIPEKKLFKPHKHSSLMNSLYN PNSKCNRKYCNRFADPNECEHNIRPLNQGTCGNCWAFASSTTISAFRCRKGLGFAEPSIK YVTLCKNKYLVDEEPPVFGHYNDNICHEGGHLSSYIEILDLSKMLPTSFDVPYNEPIKGG DCPTEVSTWGNLWNGVTALDKILNGYIYKGYFKISFLDYTQAGKTNELINILKDYIIEQG AIFVSMEISKKLSFDHDGEQVMMNCEYGEAPDHALVLIGFGDYIKSSGEKSSYWLIRNSW GSRWGDNGNFKMDMYGPRNCNGRVLFNAFPLLLKMTENNISKPLPNDMSSTDVKIRYNHS DFTKNKKNKTSQRDRNRKVTPNSYDDPYDINPRTVDPSNNNQNDYVNPYYNPDYNPIDNN DRQNNDRHPPFRDSEYDPAYPSMNNNRRFDPNDIINHRNRLRRIFQTDLTVTIGNFVYKR NIYSKRKNEYMEEFSCLRTYSMDTNLDNICRENCEKHIDTCMHSTVIGECLSRNAPNYKC IYCGM

  • title: active site
  • coordinates: Q268,C274,H453,N478
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0306900551 SKNKTSQRDR0.994unspPCHAS_0306900551 SKNKTSQRDR0.994unspPCHAS_0306900551 SKNKTSQRDR0.994unspPCHAS_0306900563 SVTPNSYDDP0.995unspPCHAS_0306900614 SPFRDSEYDP0.998unspPCHAS_030690097 SSLQDSISED0.992unspPCHAS_0306900127 STDAGSMDDD0.997unsp

PCHAS_030690      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India