PCHAS_0307000 | serine repeat antigen 4, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0307000SP0.0144080.9855060.000086CS pos: 24-25. IKT-QP. Pr: 0.6232
No Results

  • Fasta :-

    >PCHAS_0307000 MNSRLYLLLVSCAIFTINVHEIKTQPPNTPNDIINKGDPNVQNNNDISNKNSHDGLENGI STSSDLSENQSNNNTNSESSNSETPDVKTSIKSSLSKDGKGIKVTGTCNEDFRIYFSPYV WIYVTFSEGIIKIESENGVTSSINLNSLNNKCDNKKNDTFKFSAKIKDDILKIKWKTQTN ETDQGHKKDVKQFRLPDLSKEPTSIQIFTANAEEKIIESKTYDIDKNIPEKCSAISANCF LGGSLNIESCYHCTLLAQKYPSDDECFNYISSESKDKINKDTIIKGEDESDENSDEYMLK ESIYKILKKMFTNDSDYCDGSRCNKEMITDIKELDADLRIDLKNYCDILKKVDKSGTLEV HEIASEVEAFNNLVRLLNTHTNENIYILYEKLKNPAICIKNVNEWIIKKRGLVISKEHDV NPYNNPDNPKIKNILNEKYNEENTEAVGNDIIENESDNENEIVNLKNSSNKKLTSAYFNS SRYCNKDYCDRWQDKTSCMSNIEVEEQGECGVCWVFASKLHLETIRCMRGYGHYRSSALY VANCSERDKEEICDVGSNPVEFLQILHDKKHLPLESDYPYSYYRVGGSCPSPKNSWTNLW GNNKLLYYKSRSVDFTSSYGFIALSSSNYQDDLDTYIQIIKNEVRNKGSVIIYIKTNNVI DYDFNGKIIHNLCGDDDDDADHAAAIIGYGNYISEKGQKRSYWLIRNSWGYYWGDEGNFK VDMYGPRHCKYNFIHTVVIFKLDLGEIEAPQKDNQVYNYFAKHIPAFFTNLFYSNYNKRW DEFYAKEELNNYNKDISISGQTDNQVNTNDDVYSEDTNDVSTPSSKNTSIQKKLDVTHVL KYVKNNQTQTSFIKYDDILEIEQEHNCSRVQSIGLKNKNECKSFCLENWSTCKNHPSPGF CLTTLYSAEDCFFCNI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0307000.fa Sequence name : PCHAS_0307000 Sequence length : 916 VALUES OF COMPUTED PARAMETERS Coef20 : 4.679 CoefTot : 0.324 ChDiff : -30 ZoneTo : 20 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.982 1.653 0.172 0.584 MesoH : -1.099 -0.117 -0.520 0.105 MuHd_075 : 13.901 9.330 2.659 2.356 MuHd_095 : 9.982 8.958 3.073 3.712 MuHd_100 : 12.261 4.853 2.864 3.022 MuHd_105 : 14.978 5.515 4.091 2.774 Hmax_075 : 21.467 27.183 4.866 8.167 Hmax_095 : 17.238 18.725 4.345 5.425 Hmax_100 : 17.900 20.200 4.740 5.840 Hmax_105 : 19.483 24.383 5.627 6.872 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9580 0.0420 DFMC : 0.9469 0.0531
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 916 PCHAS_0307000 MNSRLYLLLVSCAIFTINVHEIKTQPPNTPNDIINKGDPNVQNNNDISNKNSHDGLENGISTSSDLSENQSNNNTNSESS 80 NSETPDVKTSIKSSLSKDGKGIKVTGTCNEDFRIYFSPYVWIYVTFSEGIIKIESENGVTSSINLNSLNNKCDNKKNDTF 160 KFSAKIKDDILKIKWKTQTNETDQGHKKDVKQFRLPDLSKEPTSIQIFTANAEEKIIESKTYDIDKNIPEKCSAISANCF 240 LGGSLNIESCYHCTLLAQKYPSDDECFNYISSESKDKINKDTIIKGEDESDENSDEYMLKESIYKILKKMFTNDSDYCDG 320 SRCNKEMITDIKELDADLRIDLKNYCDILKKVDKSGTLEVHEIASEVEAFNNLVRLLNTHTNENIYILYEKLKNPAICIK 400 NVNEWIIKKRGLVISKEHDVNPYNNPDNPKIKNILNEKYNEENTEAVGNDIIENESDNENEIVNLKNSSNKKLTSAYFNS 480 SRYCNKDYCDRWQDKTSCMSNIEVEEQGECGVCWVFASKLHLETIRCMRGYGHYRSSALYVANCSERDKEEICDVGSNPV 560 EFLQILHDKKHLPLESDYPYSYYRVGGSCPSPKNSWTNLWGNNKLLYYKSRSVDFTSSYGFIALSSSNYQDDLDTYIQII 640 KNEVRNKGSVIIYIKTNNVIDYDFNGKIIHNLCGDDDDDADHAAAIIGYGNYISEKGQKRSYWLIRNSWGYYWGDEGNFK 720 VDMYGPRHCKYNFIHTVVIFKLDLGEIEAPQKDNQVYNYFAKHIPAFFTNLFYSNYNKRWDEFYAKEELNNYNKDISISG 800 QTDNQVNTNDDVYSEDTNDVSTPSSKNTSIQKKLDVTHVLKYVKNNQTQTSFIKYDDILEIEQEHNCSRVQSIGLKNKNE 880 CKSFCLENWSTCKNHPSPGFCLTTLYSAEDCFFCNI 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0307000 4 ---MNSR|LY 0.065 . PCHAS_0307000 23 INVHEIK|TQ 0.061 . PCHAS_0307000 36 PNDIINK|GD 0.062 . PCHAS_0307000 50 NNDISNK|NS 0.075 . PCHAS_0307000 88 SETPDVK|TS 0.056 . PCHAS_0307000 92 DVKTSIK|SS 0.068 . PCHAS_0307000 97 IKSSLSK|DG 0.083 . PCHAS_0307000 100 SLSKDGK|GI 0.084 . PCHAS_0307000 103 KDGKGIK|VT 0.072 . PCHAS_0307000 113 TCNEDFR|IY 0.089 . PCHAS_0307000 132 FSEGIIK|IE 0.066 . PCHAS_0307000 151 LNSLNNK|CD 0.079 . PCHAS_0307000 155 NNKCDNK|KN 0.063 . PCHAS_0307000 156 NKCDNKK|ND 0.088 . PCHAS_0307000 161 KKNDTFK|FS 0.100 . PCHAS_0307000 165 TFKFSAK|IK 0.092 . PCHAS_0307000 167 KFSAKIK|DD 0.091 . PCHAS_0307000 172 IKDDILK|IK 0.065 . PCHAS_0307000 174 DDILKIK|WK 0.071 . PCHAS_0307000 176 ILKIKWK|TQ 0.071 . PCHAS_0307000 187 ETDQGHK|KD 0.054 . PCHAS_0307000 188 TDQGHKK|DV 0.241 . PCHAS_0307000 191 GHKKDVK|QF 0.058 . PCHAS_0307000 194 KDVKQFR|LP 0.090 . PCHAS_0307000 200 RLPDLSK|EP 0.058 . PCHAS_0307000 215 TANAEEK|II 0.085 . PCHAS_0307000 220 EKIIESK|TY 0.063 . PCHAS_0307000 226 KTYDIDK|NI 0.063 . PCHAS_0307000 231 DKNIPEK|CS 0.067 . PCHAS_0307000 259 CTLLAQK|YP 0.062 . PCHAS_0307000 275 YISSESK|DK 0.082 . PCHAS_0307000 277 SSESKDK|IN 0.064 . PCHAS_0307000 280 SKDKINK|DT 0.082 . PCHAS_0307000 285 NKDTIIK|GE 0.061 . PCHAS_0307000 300 SDEYMLK|ES 0.062 . PCHAS_0307000 305 LKESIYK|IL 0.063 . PCHAS_0307000 308 SIYKILK|KM 0.059 . PCHAS_0307000 309 IYKILKK|MF 0.084 . PCHAS_0307000 322 DYCDGSR|CN 0.072 . PCHAS_0307000 325 DGSRCNK|EM 0.118 . PCHAS_0307000 332 EMITDIK|EL 0.067 . PCHAS_0307000 339 ELDADLR|ID 0.068 . PCHAS_0307000 343 DLRIDLK|NY 0.065 . PCHAS_0307000 350 NYCDILK|KV 0.077 . PCHAS_0307000 351 YCDILKK|VD 0.071 . PCHAS_0307000 354 ILKKVDK|SG 0.081 . PCHAS_0307000 375 AFNNLVR|LL 0.087 . PCHAS_0307000 391 IYILYEK|LK 0.062 . PCHAS_0307000 393 ILYEKLK|NP 0.066 . PCHAS_0307000 400 NPAICIK|NV 0.080 . PCHAS_0307000 408 VNEWIIK|KR 0.061 . PCHAS_0307000 409 NEWIIKK|RG 0.069 . PCHAS_0307000 410 EWIIKKR|GL 0.216 . PCHAS_0307000 416 RGLVISK|EH 0.058 . PCHAS_0307000 430 NNPDNPK|IK 0.060 . PCHAS_0307000 432 PDNPKIK|NI 0.071 . PCHAS_0307000 438 KNILNEK|YN 0.067 . PCHAS_0307000 466 NEIVNLK|NS 0.060 . PCHAS_0307000 471 LKNSSNK|KL 0.075 . PCHAS_0307000 472 KNSSNKK|LT 0.174 . PCHAS_0307000 482 AYFNSSR|YC 0.083 . PCHAS_0307000 486 SSRYCNK|DY 0.082 . PCHAS_0307000 491 NKDYCDR|WQ 0.080 . PCHAS_0307000 495 CDRWQDK|TS 0.067 . PCHAS_0307000 519 CWVFASK|LH 0.058 . PCHAS_0307000 526 LHLETIR|CM 0.084 . PCHAS_0307000 529 ETIRCMR|GY 0.347 . PCHAS_0307000 535 RGYGHYR|SS 0.114 . PCHAS_0307000 547 VANCSER|DK 0.132 . PCHAS_0307000 549 NCSERDK|EE 0.060 . PCHAS_0307000 569 LQILHDK|KH 0.064 . PCHAS_0307000 570 QILHDKK|HL 0.078 . PCHAS_0307000 584 YPYSYYR|VG 0.080 . PCHAS_0307000 593 GSCPSPK|NS 0.079 . PCHAS_0307000 604 NLWGNNK|LL 0.058 . PCHAS_0307000 609 NKLLYYK|SR 0.072 . PCHAS_0307000 611 LLYYKSR|SV 0.202 . PCHAS_0307000 641 TYIQIIK|NE 0.055 . PCHAS_0307000 645 IIKNEVR|NK 0.099 . PCHAS_0307000 647 KNEVRNK|GS 0.067 . PCHAS_0307000 655 SVIIYIK|TN 0.061 . PCHAS_0307000 667 DYDFNGK|II 0.057 . PCHAS_0307000 696 GNYISEK|GQ 0.065 . PCHAS_0307000 699 ISEKGQK|RS 0.061 . PCHAS_0307000 700 SEKGQKR|SY 0.308 . PCHAS_0307000 706 RSYWLIR|NS 0.110 . PCHAS_0307000 720 GDEGNFK|VD 0.061 . PCHAS_0307000 727 VDMYGPR|HC 0.086 . PCHAS_0307000 730 YGPRHCK|YN 0.130 . PCHAS_0307000 741 HTVVIFK|LD 0.057 . PCHAS_0307000 752 EIEAPQK|DN 0.063 . PCHAS_0307000 762 VYNYFAK|HI 0.081 . PCHAS_0307000 778 FYSNYNK|RW 0.062 . PCHAS_0307000 779 YSNYNKR|WD 0.198 . PCHAS_0307000 786 WDEFYAK|EE 0.054 . PCHAS_0307000 794 ELNNYNK|DI 0.094 . PCHAS_0307000 826 VSTPSSK|NT 0.066 . PCHAS_0307000 832 KNTSIQK|KL 0.059 . PCHAS_0307000 833 NTSIQKK|LD 0.099 . PCHAS_0307000 841 DVTHVLK|YV 0.075 . PCHAS_0307000 844 HVLKYVK|NN 0.059 . PCHAS_0307000 854 TQTSFIK|YD 0.073 . PCHAS_0307000 869 QEHNCSR|VQ 0.111 . PCHAS_0307000 876 VQSIGLK|NK 0.059 . PCHAS_0307000 878 SIGLKNK|NE 0.068 . PCHAS_0307000 882 KNKNECK|SF 0.085 . PCHAS_0307000 893 ENWSTCK|NH 0.056 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0307000 ATGAATTCTCGCCTTTACCTTCTTTTAGTATCATGTGCAATATTTACTATAAATGTACAC GAGATTAAAACGCAACCCCCAAACACACCAAATGATATAATAAATAAGGGGGATCCAAAT GTGCAAAATAATAATGACATATCAAACAAAAATTCACATGATGGATTAGAAAATGGGATA AGCACTTCTTCTGACTTGTCAGAAAATCAATCGAACAACAATACAAACAGTGAATCTTCA AATAGTGAAACACCAGATGTGAAAACATCAATAAAATCATCTTTATCAAAGGATGGTAAA GGAATTAAAGTAACTGGAACATGTAATGAAGATTTCAGAATATATTTTTCTCCTTATGTT TGGATTTATGTTACATTTTCAGAGGGTATAATAAAAATAGAATCTGAAAATGGTGTAACC AGTTCCATAAATTTAAACAGTTTAAATAATAAATGTGATAATAAAAAAAATGATACTTTT AAGTTCTCTGCCAAAATCAAAGACGATATTCTAAAAATAAAATGGAAAACACAAACTAAT GAGACTGATCAAGGACATAAAAAGGATGTTAAACAATTCAGGCTTCCGGATTTATCTAAA GAGCCCACATCTATTCAAATATTCACAGCAAATGCGGAAGAAAAAATAATTGAAAGCAAA ACTTATGACATAGACAAAAACATTCCAGAAAAATGTAGTGCAATTTCAGCTAACTGTTTT TTGGGAGGAAGTCTAAATATTGAGAGTTGCTATCATTGTACATTGCTAGCTCAAAAATAT CCAAGTGATGATGAATGTTTTAATTATATTTCTAGCGAATCAAAAGATAAAATAAATAAA GATACTATAATAAAAGGAGAAGATGAATCCGATGAAAATTCAGATGAATATATGTTAAAA GAAAGTATTTATAAAATATTAAAAAAAATGTTTACTAATGATTCAGACTATTGTGATGGT AGCAGATGTAATAAAGAAATGATAACAGATATAAAAGAATTAGATGCAGATTTACGAATA GACTTAAAAAATTATTGTGATATTTTAAAGAAGGTAGATAAAAGTGGTACATTAGAGGTT CATGAAATAGCTAGCGAAGTAGAAGCATTTAATAATTTAGTAAGGTTACTTAATACACAT ACTAATGAAAATATATATATATTATATGAAAAACTTAAAAATCCAGCAATCTGTATAAAA AATGTAAATGAATGGATAATTAAGAAAAGAGGTTTAGTCATATCAAAAGAACATGATGTA AATCCATATAATAATCCAGACAACCCAAAAATAAAAAATATTTTAAACGAAAAATATAAT GAAGAAAATACAGAAGCAGTTGGTAATGATATAATAGAAAACGAATCTGACAATGAAAAT GAAATAGTGAATCTAAAAAATTCATCAAATAAAAAATTAACATCAGCCTATTTTAATAGT AGTAGATATTGTAATAAAGATTATTGTGATAGATGGCAAGATAAAACTAGTTGTATGTCT AATATAGAAGTAGAAGAACAAGGAGAATGTGGTGTATGCTGGGTATTTGCATCTAAATTA CATTTAGAAACTATTAGATGCATGAGAGGATATGGTCATTATAGAAGTTCAGCACTTTAT GTAGCCAACTGTTCAGAAAGAGATAAAGAAGAAATATGTGATGTTGGTTCAAATCCAGTC GAATTTTTACAAATTTTACATGATAAAAAACATTTGCCTTTAGAATCTGATTATCCATAT TCTTACTATCGTGTCGGAGGTTCATGTCCATCCCCCAAAAATAGTTGGACCAACTTATGG GGTAATAATAAATTATTATATTACAAATCAAGGTCAGTCGATTTTACGAGTTCATATGGT TTTATTGCTTTATCGAGTTCAAATTATCAAGATGATTTAGATACATATATACAAATAATA AAAAATGAAGTAAGAAATAAAGGGTCTGTTATTATTTATATTAAAACAAATAATGTAATA GATTACGATTTTAATGGAAAGATAATTCATAACTTATGTGGTGACGATGATGATGATGCT GATCATGCAGCAGCAATTATTGGATATGGTAATTATATAAGTGAGAAAGGACAAAAAAGA TCTTACTGGTTAATAAGAAATAGTTGGGGTTATTATTGGGGGGATGAAGGAAATTTTAAA GTTGATATGTATGGACCAAGACATTGTAAATATAACTTTATTCACACAGTTGTCATTTTT AAATTAGATTTAGGTGAAATTGAGGCCCCACAAAAAGATAATCAAGTTTACAATTATTTC GCTAAGCATATTCCTGCTTTTTTTACAAATCTATTCTATAGTAATTATAATAAACGATGG GACGAATTTTATGCTAAAGAAGAACTAAATAACTATAACAAAGATATTTCAATATCGGGT CAAACTGATAACCAAGTGAATACTAATGATGATGTCTATAGTGAAGATACCAATGATGTA TCTACTCCTTCCTCGAAAAATACTTCGATTCAGAAAAAATTAGATGTTACACATGTTTTG AAATATGTTAAAAATAATCAAACACAAACATCTTTTATAAAATATGATGATATCCTTGAA ATAGAACAGGAACATAATTGCTCAAGAGTACAAAGTATCGGTTTAAAAAATAAAAATGAA TGTAAATCATTTTGTTTAGAAAACTGGAGTACCTGTAAAAATCATCCTTCTCCTGGATTT TGTTTGACAACCTTATATTCTGCTGAAGACTGCTTTTTCTGTAACATATAA
  • Download Fasta

  • Fasta :-

    MNSRLYLLLVSCAIFTINVHEIKTQPPNTPNDIINKGDPNVQNNNDISNKNSHDGLENGI STSSDLSENQSNNNTNSESSNSETPDVKTSIKSSLSKDGKGIKVTGTCNEDFRIYFSPYV WIYVTFSEGIIKIESENGVTSSINLNSLNNKCDNKKNDTFKFSAKIKDDILKIKWKTQTN ETDQGHKKDVKQFRLPDLSKEPTSIQIFTANAEEKIIESKTYDIDKNIPEKCSAISANCF LGGSLNIESCYHCTLLAQKYPSDDECFNYISSESKDKINKDTIIKGEDESDENSDEYMLK ESIYKILKKMFTNDSDYCDGSRCNKEMITDIKELDADLRIDLKNYCDILKKVDKSGTLEV HEIASEVEAFNNLVRLLNTHTNENIYILYEKLKNPAICIKNVNEWIIKKRGLVISKEHDV NPYNNPDNPKIKNILNEKYNEENTEAVGNDIIENESDNENEIVNLKNSSNKKLTSAYFNS SRYCNKDYCDRWQDKTSCMSNIEVEEQGECGVCWVFASKLHLETIRCMRGYGHYRSSALY VANCSERDKEEICDVGSNPVEFLQILHDKKHLPLESDYPYSYYRVGGSCPSPKNSWTNLW GNNKLLYYKSRSVDFTSSYGFIALSSSNYQDDLDTYIQIIKNEVRNKGSVIIYIKTNNVI DYDFNGKIIHNLCGDDDDDADHAAAIIGYGNYISEKGQKRSYWLIRNSWGYYWGDEGNFK VDMYGPRHCKYNFIHTVVIFKLDLGEIEAPQKDNQVYNYFAKHIPAFFTNLFYSNYNKRW DEFYAKEELNNYNKDISISGQTDNQVNTNDDVYSEDTNDVSTPSSKNTSIQKKLDVTHVL KYVKNNQTQTSFIKYDDILEIEQEHNCSRVQSIGLKNKNECKSFCLENWSTCKNHPSPGF CLTTLYSAEDCFFCNI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0307000199 SLPDLSKEPT0.992unspPCHAS_0307000199 SLPDLSKEPT0.992unspPCHAS_0307000199 SLPDLSKEPT0.992unspPCHAS_0307000290 SGEDESDENS0.995unspPCHAS_0307000824 SVSTPSSKNT0.994unspPCHAS_030700080 SNSESSNSET0.997unspPCHAS_030700090 SDVKTSIKSS0.991unsp

PCHAS_030700      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India