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Computed_GO_Component_IDs:
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Computed_GO_Components:
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Computed_GO_Function_IDs:
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Computed_GO_Functions:
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Computed_GO_Process_IDs:
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Computed_GO_Processes:
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Curated_GO_Component_IDs: GO:0016021
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>PCHAS_0313700
MVFFYSIYSALMKYMTNKLSYSRKQKIFVINNCLFFSFILFYISYYFFFNGLIYPAVKIV
FHGSVIANQTIVYKNSILESIWLLYTSGSYFNMGVLLIFSVIIPILKFVMVTDNFYSFFK
LYNLGLKFNENDKDDAKLIYYINIVNENEEFALKKFSILSSISRFQFVDVFISLFIVSSL
NLYLLEAKILIGAYHFLNYCVLSTISSYLLLTFMKIKINIFKEGNIKIFSSRNENSVAGK
NSDSMLCNGKRDILKKESSKIEFNKIYDSNNTKESHQWNKKNKKKSNKEDLNSDNMNVTH
KKKMTSEKDDKIGHINSKYKMNDNEIKSLEEDTSAGKTTGDENMSPNKQNDCEDIDSIDG
ENVIEHNSYENNILCYNKLQSLNSVSYLYKVMKNNDAYIYLKKKKFNLLLRESFQKTRFN
TIKVAHTFILLFLLCISIYFITSVETDMLGIYIYLNFFNFNIESVMIDYIDMLNILKLKV
NQNYVFPFFFMFPFIFPLIIAVSFMLSVFFMNLYYVNFSVWYKKITAFSDELVFDPEVQN
NQKITISERHNYLCIKKEIEKNDKLSNTSDELSSHNNSTITSSKSEDINTEFVYSGLLNF
YFLMSSFFASICSILLHMSLGEIIAIAIIIFYQIVKHTYNLNILVLYKTDKIHFSKFILF
IAFGLICFSINMYVAQWEKLVKKLQKIRKQIYLFEANRCSEIVDLNIQKNKNWTIPIYTY
FFKSLIKPNQIVFKKNKKIDISEDNNTHIIRTQSSNMYDYDENRMYQNMQSSIDEETLSY
LNSSSITNIRNKKKNSSKKNKNSTEDPAGVINKYNIQSKGNNDRLINSGMRKEQCGPVSF
LFSEVKKRSTKLGKSNYNKKNRISVQSYEQIRDGEDDNIDDDEDGIYEEDKNENEDTESR
ENDPIEGGHNNSLEKSNSQNIPYIKSFVPIKSILLIQLEKLKAKKKKDRGHGSKYGDKSE
PIDVTKLFYYFHILLFILIISTTLMGFFKNESVLKFNMNSVNKRLNDYFTSPNFYAFIPT
SVGKCKTKKYLAKEPCYEVGRIYHEEKTFYHATLLFLQGISSINIDNIYFYYDQGKYYLT
FNGYFKHIIGPLFLKLCLGSNFCPISTYAYLIGNKPTFSITIEAQCDDYAAPNYISNLVV
SDLQITKIEVIKHSDIIDNVDIKLDDIQERVQEKVNAMLADHLQIIIWKNQKYDLESFVN
YLISRNSLYGFSCEPYNY
- Download Fasta
-
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0313700.fa
Sequence name : PCHAS_0313700
Sequence length : 1218
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.396
CoefTot : -3.452
ChDiff : 17
ZoneTo : 129
KR : 10
DE : 2
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.694 2.788 0.557 0.966
MesoH : 0.971 1.373 0.003 0.565
MuHd_075 : 38.419 25.810 10.645 7.976
MuHd_095 : 27.457 24.708 9.415 7.447
MuHd_100 : 34.578 19.761 9.577 7.410
MuHd_105 : 41.408 23.296 11.077 8.730
Hmax_075 : 13.767 23.200 4.753 6.956
Hmax_095 : 18.113 24.100 4.157 6.597
Hmax_100 : 17.000 14.700 2.399 6.540
Hmax_105 : 15.400 13.100 1.693 5.390
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.4135 0.5865
DFMC : 0.1253 0.8747
This protein is probably imported in chloroplast.
f(Ser) = 0.1008 f(Arg) = 0.0078 CMi = 1.24640
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
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Fasta :-
>PCHAS_0313700
ATGGTATTTTTTTATAGCATATATAGCGCACTCATGAAGTATATGACGAATAAATTGAGC
TATTCGAGAAAGCAAAAAATATTTGTAATTAACAACTGTTTGTTTTTTTCGTTTATTTTG
TTTTATATTTCTTATTATTTTTTCTTCAATGGACTTATTTACCCTGCAGTGAAGATCGTG
TTTCATGGGAGCGTGATAGCGAATCAGACCATAGTGTATAAGAACTCAATTTTGGAATCA
ATATGGCTGCTATACACAAGCGGTAGTTATTTTAATATGGGCGTGCTGCTCATATTTTCA
GTAATAATTCCGATTTTAAAATTTGTTATGGTTACTGACAATTTTTATAGCTTCTTTAAG
CTATATAATTTAGGTTTAAAATTTAATGAGAACGATAAAGATGATGCAAAATTAATTTAT
TACATTAACATTGTAAATGAGAATGAAGAATTTGCTTTAAAGAAATTTAGTATTTTAAGT
TCGATTTCGCGATTTCAATTTGTAGATGTATTTATATCATTGTTTATTGTGTCCTCATTG
AACTTATATTTGTTAGAAGCAAAGATATTAATTGGAGCTTACCATTTTTTAAACTATTGT
GTTTTATCAACAATATCCTCTTATTTATTATTAACATTTATGAAAATAAAAATAAATATA
TTTAAAGAAGGCAATATAAAAATCTTTTCATCTCGTAATGAAAATTCAGTAGCTGGAAAA
AATTCAGACAGCATGTTATGTAATGGAAAGAGAGATATATTAAAGAAAGAAAGTTCAAAA
ATAGAATTTAATAAAATATACGATAGTAATAATACAAAAGAGAGCCACCAATGGAATAAA
AAAAATAAAAAGAAATCCAATAAGGAAGATCTAAATAGTGATAACATGAATGTAACACAT
AAAAAAAAAATGACATCTGAGAAGGATGATAAGATTGGTCATATAAATAGTAAATACAAA
ATGAATGATAATGAAATTAAAAGTTTAGAAGAAGATACATCCGCTGGAAAAACAACAGGG
GATGAAAATATGTCACCAAATAAACAAAATGATTGTGAAGATATAGATTCCATTGATGGT
GAAAATGTTATAGAACATAATTCATATGAAAATAATATTTTATGTTACAACAAATTACAA
TCATTAAATAGTGTAAGTTATTTATATAAAGTAATGAAAAATAATGATGCATATATTTAT
TTAAAAAAGAAAAAATTTAATTTATTATTAAGAGAGAGTTTTCAGAAAACTCGTTTTAAT
ACAATAAAAGTAGCACATACATTTATACTATTATTTTTATTATGCATATCTATATATTTT
ATAACATCAGTAGAAACAGATATGTTAGGAATATATATATATTTAAATTTTTTCAATTTT
AATATAGAAAGCGTAATGATTGATTATATAGATATGTTAAATATATTAAAATTAAAAGTA
AACCAAAATTATGTGTTTCCATTTTTTTTTATGTTTCCGTTTATATTTCCTTTAATCATA
GCCGTATCTTTTATGTTAAGTGTATTTTTTATGAATTTGTATTATGTCAATTTTTCAGTA
TGGTATAAGAAAATTACAGCCTTTAGTGATGAATTAGTATTTGATCCTGAAGTACAAAAT
AATCAAAAAATAACAATATCCGAAAGACATAACTATTTATGTATTAAGAAAGAAATTGAA
AAGAATGATAAATTATCAAATACATCAGATGAATTATCTTCTCATAATAATTCCACAATA
ACAAGTAGTAAGAGTGAAGATATCAATACTGAATTTGTTTATAGTGGGCTTTTAAATTTT
TATTTTTTAATGTCATCGTTTTTTGCTAGCATATGCTCAATATTATTACACATGTCGTTA
GGAGAAATAATTGCAATAGCTATTATAATTTTTTATCAGATAGTTAAACATACATATAAT
TTAAATATTTTAGTATTATATAAAACCGATAAAATTCATTTTTCAAAATTTATATTATTT
ATTGCCTTTGGCTTGATTTGCTTTTCAATTAATATGTATGTAGCACAATGGGAAAAATTA
GTAAAGAAGTTACAAAAAATAAGAAAACAAATATATCTTTTCGAAGCTAACAGATGTAGT
GAAATTGTTGATTTAAATATTCAAAAAAATAAAAACTGGACTATACCCATTTACACTTAT
TTTTTTAAATCTCTAATTAAGCCAAATCAAATTGTTTTTAAAAAAAATAAAAAAATTGAT
ATATCCGAAGATAATAACACTCATATAATTCGAACCCAATCTAGTAATATGTATGATTAT
GATGAAAACAGGATGTATCAAAATATGCAATCATCGATTGATGAAGAAACATTAAGTTAT
TTAAATTCGTCTTCTATTACTAATATTAGGAATAAGAAAAAAAATAGCAGTAAGAAAAAT
AAAAATTCTACTGAAGATCCAGCAGGAGTTATAAACAAGTATAATATTCAAAGTAAAGGA
AATAACGATAGACTTATAAATTCTGGAATGAGAAAAGAACAGTGTGGGCCTGTTAGTTTC
TTATTTTCTGAAGTTAAAAAAAGAAGTACCAAGCTTGGTAAATCAAATTATAATAAAAAA
AATAGAATTAGTGTCCAAAGTTATGAACAAATAAGAGATGGGGAAGATGATAATATAGAT
GATGATGAAGATGGAATATATGAAGAAGATAAAAATGAAAATGAAGATACCGAATCAAGA
GAAAATGATCCTATTGAAGGAGGTCATAATAATTCTTTAGAAAAATCGAATTCTCAAAAT
ATACCATATATTAAAAGCTTTGTACCAATTAAATCGATATTATTGATACAATTAGAAAAA
TTAAAAGCAAAGAAAAAAAAAGATAGAGGACATGGTAGCAAATATGGAGATAAATCCGAA
CCAATAGATGTTACAAAATTATTTTATTATTTTCATATTTTATTATTTATTTTAATTATA
TCAACAACGTTAATGGGATTCTTTAAAAATGAGAGTGTACTTAAATTTAATATGAATTCA
GTTAATAAAAGATTAAATGATTATTTTACATCTCCCAATTTTTATGCATTCATACCTACA
AGTGTTGGAAAATGTAAAACTAAAAAATATTTAGCGAAAGAACCTTGTTATGAAGTTGGC
CGTATATATCATGAAGAAAAAACATTTTATCATGCTACACTTTTATTTTTACAAGGTATT
AGTTCAATCAATATTGATAACATATATTTTTATTATGATCAAGGGAAATATTATTTAACA
TTCAATGGATATTTTAAACATATCATTGGTCCTTTGTTTTTAAAACTATGTTTAGGATCC
AATTTTTGCCCTATAAGTACTTATGCATATTTAATAGGCAATAAACCAACATTTTCTATA
ACTATAGAAGCTCAATGTGATGATTATGCAGCACCAAATTATATTAGTAATCTAGTTGTT
AGCGATTTACAAATTACAAAAATTGAAGTTATAAAACATTCTGATATTATTGATAATGTT
GATATAAAATTAGATGATATTCAAGAAAGAGTTCAAGAAAAAGTTAATGCAATGCTAGCT
GATCATCTTCAAATTATTATATGGAAAAATCAAAAATATGATTTAGAAAGCTTTGTCAAT
TATCTGATTTCAAGAAATTCTCTTTATGGTTTTAGTTGTGAGCCATATAATTATTAG
- Download Fasta
|
ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
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PCHAS_0313700 | 328 S | NEIKSLEED | 0.995 | unsp | PCHAS_0313700 | 328 S | NEIKSLEED | 0.995 | unsp | PCHAS_0313700 | 328 S | NEIKSLEED | 0.995 | unsp | PCHAS_0313700 | 796 S | KKKNSSKKN | 0.993 | unsp | PCHAS_0313700 | 797 S | KKNSSKKNK | 0.991 | unsp | PCHAS_0313700 | 803 S | KNKNSTEDP | 0.997 | unsp | PCHAS_0313700 | 849 S | VKKRSTKLG | 0.993 | unsp | PCHAS_0313700 | 286 S | NKKKSNKED | 0.998 | unsp | PCHAS_0313700 | 306 S | KKMTSEKDD | 0.998 | unsp |