PCHAS_0319000 | lysophospholipase, putative

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0319000OTHER0.9999400.0000390.000021
No Results

  • Fasta :-

    >PCHAS_0319000 MEEIELNSDDLRNTTCNLDGDPKIGWFCNKNGLLLKTYGWLVKNAIGIILLIHGLKSHTR LTFMRINIKMPNNDGDVVVDNNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWKNIR GSADRFDDLVDDVIDYMNYIQDEISNENQTDDESYDIVPTKKKRLPMYIIGHSMGGSIAI RILQLLRKEKENDINAGDENNYKKCNIMLDNSTNANEISNAMVEDMISDMRDMNTFNDNS VKHISDKRCITNSKNDDPGTSSASTSSRGSANTNDSPSVRPKVVNSISKKTHSSDISIAS TSGGTIDCSSDISIASTSGNKQVRQYNHLDNLNIRGCISLSGMLGLKIVGLPGSFVFKYI YLPVTKLMSHFAPYRKTVAEFPYKTSQFIDNVFKYDKFRYNEGITYKYLHEIIKTMGKLF ENAKNMPRDIPLLLVHSTDDGICNYKGSQSFHDKIDVPGKEIYLVENLNHSTTLESGNED VLKKVVDWINNLGNNNNGETKKEQKSKKKKEQKSKIKEDKKKAKDKSK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0319000.fa Sequence name : PCHAS_0319000 Sequence length : 528 VALUES OF COMPUTED PARAMETERS Coef20 : 3.278 CoefTot : 0.000 ChDiff : 2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.394 1.559 0.238 0.664 MesoH : -0.263 0.335 -0.259 0.220 MuHd_075 : 19.033 11.910 5.784 4.091 MuHd_095 : 27.070 14.823 8.224 3.947 MuHd_100 : 34.256 18.324 8.565 5.293 MuHd_105 : 33.885 16.744 6.843 5.448 Hmax_075 : -7.350 2.100 -3.382 1.342 Hmax_095 : 0.800 6.700 0.585 1.980 Hmax_100 : 9.100 9.000 0.163 3.230 Hmax_105 : 9.100 9.000 0.163 3.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9634 0.0366 DFMC : 0.9671 0.0329
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 528 PCHAS_0319000 MEEIELNSDDLRNTTCNLDGDPKIGWFCNKNGLLLKTYGWLVKNAIGIILLIHGLKSHTRLTFMRINIKMPNNDGDVVVD 80 NNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWKNIRGSADRFDDLVDDVIDYMNYIQDEISNENQTDDESYDIVPT 160 KKKRLPMYIIGHSMGGSIAIRILQLLRKEKENDINAGDENNYKKCNIMLDNSTNANEISNAMVEDMISDMRDMNTFNDNS 240 VKHISDKRCITNSKNDDPGTSSASTSSRGSANTNDSPSVRPKVVNSISKKTHSSDISIASTSGGTIDCSSDISIASTSGN 320 KQVRQYNHLDNLNIRGCISLSGMLGLKIVGLPGSFVFKYIYLPVTKLMSHFAPYRKTVAEFPYKTSQFIDNVFKYDKFRY 400 NEGITYKYLHEIIKTMGKLFENAKNMPRDIPLLLVHSTDDGICNYKGSQSFHDKIDVPGKEIYLVENLNHSTTLESGNED 480 VLKKVVDWINNLGNNNNGETKKEQKSKKKKEQKSKIKEDKKKAKDKSK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0319000 12 LNSDDLR|NT 0.108 . PCHAS_0319000 23 NLDGDPK|IG 0.056 . PCHAS_0319000 30 IGWFCNK|NG 0.055 . PCHAS_0319000 36 KNGLLLK|TY 0.067 . PCHAS_0319000 43 TYGWLVK|NA 0.072 . PCHAS_0319000 56 LLIHGLK|SH 0.069 . PCHAS_0319000 60 GLKSHTR|LT 0.098 . PCHAS_0319000 65 TRLTFMR|IN 0.116 . PCHAS_0319000 69 FMRINIK|MP 0.061 . PCHAS_0319000 88 NNYYIYK|DS 0.075 . PCHAS_0319000 94 KDSWIEK|FN 0.080 . PCHAS_0319000 117 GESQAWK|NI 0.082 . PCHAS_0319000 120 QAWKNIR|GS 0.114 . PCHAS_0319000 125 IRGSADR|FD 0.109 . PCHAS_0319000 161 YDIVPTK|KK 0.060 . PCHAS_0319000 162 DIVPTKK|KR 0.072 . PCHAS_0319000 163 IVPTKKK|RL 0.088 . PCHAS_0319000 164 VPTKKKR|LP 0.184 . PCHAS_0319000 181 GGSIAIR|IL 0.087 . PCHAS_0319000 187 RILQLLR|KE 0.061 . PCHAS_0319000 188 ILQLLRK|EK 0.081 . PCHAS_0319000 190 QLLRKEK|EN 0.127 . PCHAS_0319000 203 GDENNYK|KC 0.065 . PCHAS_0319000 204 DENNYKK|CN 0.099 . PCHAS_0319000 231 DMISDMR|DM 0.090 . PCHAS_0319000 242 FNDNSVK|HI 0.084 . PCHAS_0319000 247 VKHISDK|RC 0.065 . PCHAS_0319000 248 KHISDKR|CI 0.164 . PCHAS_0319000 254 RCITNSK|ND 0.065 . PCHAS_0319000 268 SASTSSR|GS 0.127 . PCHAS_0319000 280 NDSPSVR|PK 0.087 . PCHAS_0319000 282 SPSVRPK|VV 0.103 . PCHAS_0319000 289 VVNSISK|KT 0.067 . PCHAS_0319000 290 VNSISKK|TH 0.112 . PCHAS_0319000 321 ASTSGNK|QV 0.068 . PCHAS_0319000 324 SGNKQVR|QY 0.106 . PCHAS_0319000 335 LDNLNIR|GC 0.089 . PCHAS_0319000 347 SGMLGLK|IV 0.069 . PCHAS_0319000 358 PGSFVFK|YI 0.072 . PCHAS_0319000 366 IYLPVTK|LM 0.057 . PCHAS_0319000 375 SHFAPYR|KT 0.096 . PCHAS_0319000 376 HFAPYRK|TV 0.086 . PCHAS_0319000 384 VAEFPYK|TS 0.062 . PCHAS_0319000 394 FIDNVFK|YD 0.058 . PCHAS_0319000 397 NVFKYDK|FR 0.062 . PCHAS_0319000 399 FKYDKFR|YN 0.125 . PCHAS_0319000 407 NEGITYK|YL 0.090 . PCHAS_0319000 414 YLHEIIK|TM 0.070 . PCHAS_0319000 418 IIKTMGK|LF 0.065 . PCHAS_0319000 424 KLFENAK|NM 0.059 . PCHAS_0319000 428 NAKNMPR|DI 0.099 . PCHAS_0319000 446 DGICNYK|GS 0.059 . PCHAS_0319000 454 SQSFHDK|ID 0.076 . PCHAS_0319000 460 KIDVPGK|EI 0.072 . PCHAS_0319000 483 GNEDVLK|KV 0.088 . PCHAS_0319000 484 NEDVLKK|VV 0.134 . PCHAS_0319000 501 NNNGETK|KE 0.064 . PCHAS_0319000 502 NNGETKK|EQ 0.090 . PCHAS_0319000 505 ETKKEQK|SK 0.087 . PCHAS_0319000 507 KKEQKSK|KK 0.070 . PCHAS_0319000 508 KEQKSKK|KK 0.153 . PCHAS_0319000 509 EQKSKKK|KE 0.092 . PCHAS_0319000 510 QKSKKKK|EQ 0.149 . PCHAS_0319000 513 KKKKEQK|SK 0.097 . PCHAS_0319000 515 KKEQKSK|IK 0.083 . PCHAS_0319000 517 EQKSKIK|ED 0.064 . PCHAS_0319000 520 SKIKEDK|KK 0.065 . PCHAS_0319000 521 KIKEDKK|KA 0.099 . PCHAS_0319000 522 IKEDKKK|AK 0.155 . PCHAS_0319000 524 EDKKKAK|DK 0.121 . PCHAS_0319000 526 KKKAKDK|SK 0.111 . PCHAS_0319000 528 KAKDKSK|-- 0.075 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0319000 ATGGAAGAAATTGAATTGAATAGTGATGATTTAAGGAATACAACATGTAATTTAGATGGA GATCCTAAGATAGGTTGGTTCTGTAACAAAAATGGTTTACTTTTAAAAACATATGGGTGG CTAGTTAAAAATGCTATAGGAATTATATTGTTAATACATGGACTAAAATCCCATACTCGA TTAACTTTTATGAGAATAAATATAAAAATGCCAAATAATGATGGAGACGTAGTAGTAGAC AATAATAATTACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAATGGTTAT TCAGTATATGCACTAGATTTGCAAGGGCATGGTGAATCACAAGCATGGAAAAATATAAGA GGAAGTGCCGATCGCTTTGATGATTTAGTTGATGATGTAATAGATTATATGAATTACATT CAAGATGAAATCTCAAACGAAAATCAAACGGATGATGAATCTTATGATATAGTACCAACT AAAAAAAAAAGACTTCCTATGTATATTATTGGGCATTCGATGGGAGGAAGTATTGCTATA AGAATATTACAATTATTAAGAAAAGAAAAAGAAAATGATATTAATGCTGGAGATGAAAAT AACTATAAAAAATGTAACATCATGTTAGACAACTCTACTAATGCTAATGAAATTAGCAAT GCTATGGTAGAAGATATGATTAGTGATATGCGTGATATGAATACTTTTAATGATAATTCT GTAAAACATATTTCGGATAAGCGTTGCATTACGAATTCTAAAAATGATGATCCTGGTACT TCTAGTGCTAGTACAAGTTCTAGGGGAAGTGCTAATACAAATGATAGTCCAAGTGTTCGC CCCAAGGTTGTTAATAGTATAAGTAAAAAAACTCATTCCAGCGACATTTCCATAGCTAGT ACTAGTGGAGGCACAATTGATTGTTCCAGTGACATTTCCATAGCTAGTACTAGTGGAAAC AAACAAGTTAGACAATATAATCATTTAGATAATTTAAATATTAGAGGTTGCATATCATTA TCCGGAATGTTAGGACTCAAAATAGTAGGACTACCAGGATCATTTGTATTTAAATATATT TATTTACCTGTAACAAAATTAATGTCGCATTTTGCACCTTATAGAAAAACAGTTGCAGAA TTTCCTTATAAAACTTCTCAATTTATTGACAATGTATTTAAATATGATAAATTTAGATAT AATGAAGGAATAACATATAAATATTTACATGAAATTATAAAAACAATGGGGAAATTGTTT GAGAATGCGAAAAATATGCCCAGAGATATTCCTTTGTTATTAGTTCATTCAACAGATGAT GGGATTTGCAATTATAAAGGGTCGCAATCATTTCATGATAAAATAGATGTTCCTGGTAAA GAAATATATCTTGTTGAAAACCTAAATCATTCTACAACGTTAGAGTCAGGAAATGAAGAT GTTTTAAAAAAAGTTGTGGATTGGATTAACAATTTGGGAAATAATAATAACGGCGAAACA AAAAAGGAGCAAAAAAGTAAAAAAAAAAAAGAACAAAAAAGTAAAATAAAAGAAGATAAA AAAAAGGCAAAAGATAAGTCAAAGTAA
  • Download Fasta

  • Fasta :-

    MEEIELNSDDLRNTTCNLDGDPKIGWFCNKNGLLLKTYGWLVKNAIGIILLIHGLKSHTR LTFMRINIKMPNNDGDVVVDNNNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWKNIR GSADRFDDLVDDVIDYMNYIQDEISNENQTDDESYDIVPTKKKRLPMYIIGHSMGGSIAI RILQLLRKEKENDINAGDENNYKKCNIMLDNSTNANEISNAMVEDMISDMRDMNTFNDNS VKHISDKRCITNSKNDDPGTSSASTSSRGSANTNDSPSVRPKVVNSISKKTHSSDISIAS TSGGTIDCSSDISIASTSGNKQVRQYNHLDNLNIRGCISLSGMLGLKIVGLPGSFVFKYI YLPVTKLMSHFAPYRKTVAEFPYKTSQFIDNVFKYDKFRYNEGITYKYLHEIIKTMGKLF ENAKNMPRDIPLLLVHSTDDGICNYKGSQSFHDKIDVPGKEIYLVENLNHSTTLESGNED VLKKVVDWINNLGNNNNGETKKEQKSKKKKEQKSKIKEDKKKAKDKSK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0319000278 SNDSPSVRPK0.993unspPCHAS_0319000278 SNDSPSVRPK0.993unspPCHAS_0319000278 SNDSPSVRPK0.993unspPCHAS_0319000506 SKEQKSKKKK0.997unspPCHAS_0319000514 SKEQKSKIKE0.993unspPCHAS_0319000122 SNIRGSADRF0.992unspPCHAS_0319000270 SSSRGSANTN0.993unsp

PCHAS_001000      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India