PCHAS_0514700 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_0514700OTHER0.9998430.0001270.000029
No Results

  • Fasta :-

    >PCHAS_0514700 MDEVAKKRMYILGMEGSANKLGISIIDEEMKILVNMRRTYVSEIGCGFIPREINAHHKYY IIDMIKDCLNKLNIKITDIGLICYTKGPGIGSALYVAYNISKIFSLLFNIPVIGVNHCIS HIEMGIFITKLQHPIILYVSGSNTQIIYYNDYKKKYEIIGETLDIAIGNVIDRSARILKI SNSPSPGYNVELWARKKKLLRLLRKMEEREKGNQIHTNDGNNESDALSSNSKDTPSSKFN KKEKFSQSLYYNELLQFPYTIKGMDISFSGYDFYISKYFSKYINKNSKKGNPQYKSNKKK GTSQISKEEDNNKKQKINEDSSLQNDDITLEDELYQDSPNSIDNSIQNNNKINHNKQTGT DKNNALPNYNFLHGMKGSSYYEDNIIYKNENKQNYGQNNEYYDDNCSIETSSDYYEKDLE ETSPDEIEASKLTDEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNV FLQNMMKKMAKQKNIKIGFMDHSYCVDNGAMIAYTGYLEYLNSQKKENFNFENISIHQRY RTDDVFVTWR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0514700.fa Sequence name : PCHAS_0514700 Sequence length : 550 VALUES OF COMPUTED PARAMETERS Coef20 : 3.509 CoefTot : 0.000 ChDiff : 2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.712 0.156 0.656 MesoH : 0.429 0.883 -0.097 0.434 MuHd_075 : 27.038 12.122 6.477 4.380 MuHd_095 : 22.400 12.195 6.397 2.853 MuHd_100 : 10.129 13.362 3.902 2.204 MuHd_105 : 9.104 14.292 2.939 2.033 Hmax_075 : 15.867 13.067 1.968 4.783 Hmax_095 : 4.025 8.700 -0.478 2.520 Hmax_100 : 4.000 8.200 -0.821 3.060 Hmax_105 : 5.900 9.600 -0.884 2.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9183 0.0817 DFMC : 0.9321 0.0679
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 550 PCHAS_0514700 MDEVAKKRMYILGMEGSANKLGISIIDEEMKILVNMRRTYVSEIGCGFIPREINAHHKYYIIDMIKDCLNKLNIKITDIG 80 LICYTKGPGIGSALYVAYNISKIFSLLFNIPVIGVNHCISHIEMGIFITKLQHPIILYVSGSNTQIIYYNDYKKKYEIIG 160 ETLDIAIGNVIDRSARILKISNSPSPGYNVELWARKKKLLRLLRKMEEREKGNQIHTNDGNNESDALSSNSKDTPSSKFN 240 KKEKFSQSLYYNELLQFPYTIKGMDISFSGYDFYISKYFSKYINKNSKKGNPQYKSNKKKGTSQISKEEDNNKKQKINED 320 SSLQNDDITLEDELYQDSPNSIDNSIQNNNKINHNKQTGTDKNNALPNYNFLHGMKGSSYYEDNIIYKNENKQNYGQNNE 400 YYDDNCSIETSSDYYEKDLEETSPDEIEASKLTDEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNV 480 FLQNMMKKMAKQKNIKIGFMDHSYCVDNGAMIAYTGYLEYLNSQKKENFNFENISIHQRYRTDDVFVTWR 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0514700 6 -MDEVAK|KR 0.066 . PCHAS_0514700 7 MDEVAKK|RM 0.088 . PCHAS_0514700 8 DEVAKKR|MY 0.202 . PCHAS_0514700 20 MEGSANK|LG 0.059 . PCHAS_0514700 31 IIDEEMK|IL 0.063 . PCHAS_0514700 37 KILVNMR|RT 0.092 . PCHAS_0514700 38 ILVNMRR|TY 0.120 . PCHAS_0514700 51 GCGFIPR|EI 0.105 . PCHAS_0514700 58 EINAHHK|YY 0.071 . PCHAS_0514700 66 YIIDMIK|DC 0.063 . PCHAS_0514700 71 IKDCLNK|LN 0.060 . PCHAS_0514700 75 LNKLNIK|IT 0.069 . PCHAS_0514700 86 GLICYTK|GP 0.066 . PCHAS_0514700 102 VAYNISK|IF 0.061 . PCHAS_0514700 130 MGIFITK|LQ 0.064 . PCHAS_0514700 153 IYYNDYK|KK 0.063 . PCHAS_0514700 154 YYNDYKK|KY 0.127 . PCHAS_0514700 155 YNDYKKK|YE 0.142 . PCHAS_0514700 173 IGNVIDR|SA 0.169 . PCHAS_0514700 176 VIDRSAR|IL 0.245 . PCHAS_0514700 179 RSARILK|IS 0.106 . PCHAS_0514700 195 NVELWAR|KK 0.065 . PCHAS_0514700 196 VELWARK|KK 0.059 . PCHAS_0514700 197 ELWARKK|KL 0.084 . PCHAS_0514700 198 LWARKKK|LL 0.337 . PCHAS_0514700 201 RKKKLLR|LL 0.102 . PCHAS_0514700 204 KLLRLLR|KM 0.198 . PCHAS_0514700 205 LLRLLRK|ME 0.087 . PCHAS_0514700 209 LRKMEER|EK 0.162 . PCHAS_0514700 211 KMEEREK|GN 0.063 . PCHAS_0514700 232 ALSSNSK|DT 0.074 . PCHAS_0514700 238 KDTPSSK|FN 0.070 . PCHAS_0514700 241 PSSKFNK|KE 0.070 . PCHAS_0514700 242 SSKFNKK|EK 0.099 . PCHAS_0514700 244 KFNKKEK|FS 0.074 . PCHAS_0514700 262 QFPYTIK|GM 0.066 . PCHAS_0514700 277 YDFYISK|YF 0.070 . PCHAS_0514700 281 ISKYFSK|YI 0.075 . PCHAS_0514700 285 FSKYINK|NS 0.067 . PCHAS_0514700 288 YINKNSK|KG 0.067 . PCHAS_0514700 289 INKNSKK|GN 0.122 . PCHAS_0514700 295 KGNPQYK|SN 0.135 . PCHAS_0514700 298 PQYKSNK|KK 0.078 . PCHAS_0514700 299 QYKSNKK|KG 0.084 . PCHAS_0514700 300 YKSNKKK|GT 0.324 . PCHAS_0514700 307 GTSQISK|EE 0.068 . PCHAS_0514700 313 KEEDNNK|KQ 0.064 . PCHAS_0514700 314 EEDNNKK|QK 0.087 . PCHAS_0514700 316 DNNKKQK|IN 0.089 . PCHAS_0514700 351 SIQNNNK|IN 0.070 . PCHAS_0514700 356 NKINHNK|QT 0.088 . PCHAS_0514700 362 KQTGTDK|NN 0.056 . PCHAS_0514700 376 NFLHGMK|GS 0.071 . PCHAS_0514700 388 EDNIIYK|NE 0.064 . PCHAS_0514700 392 IYKNENK|QN 0.065 . PCHAS_0514700 417 SSDYYEK|DL 0.079 . PCHAS_0514700 431 DEIEASK|LT 0.062 . PCHAS_0514700 437 KLTDEEK|RK 0.061 . PCHAS_0514700 438 LTDEEKR|KI 0.135 . PCHAS_0514700 439 TDEEKRK|IQ 0.078 . PCHAS_0514700 460 LIEITER|AI 0.074 . PCHAS_0514700 468 IAFTNSK|EV 0.077 . PCHAS_0514700 487 FLQNMMK|KM 0.064 . PCHAS_0514700 488 LQNMMKK|MA 0.154 . PCHAS_0514700 491 MMKKMAK|QK 0.079 . PCHAS_0514700 493 KKMAKQK|NI 0.096 . PCHAS_0514700 496 AKQKNIK|IG 0.059 . PCHAS_0514700 525 EYLNSQK|KE 0.055 . PCHAS_0514700 526 YLNSQKK|EN 0.104 . PCHAS_0514700 539 NISIHQR|YR 0.108 . PCHAS_0514700 541 SIHQRYR|TD 0.100 . PCHAS_0514700 550 DVFVTWR|-- 0.087 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0514700 ATGGATGAGGTTGCAAAGAAAAGAATGTATATTTTAGGAATGGAAGGGAGTGCTAATAAG TTAGGGATCAGTATCATCGATGAAGAAATGAAAATACTTGTAAATATGAGAAGAACTTAT GTTTCAGAAATTGGATGTGGTTTTATTCCTAGAGAAATAAATGCTCATCATAAATATTAT ATAATTGATATGATAAAAGATTGTTTAAATAAATTAAATATAAAAATAACAGATATAGGA TTAATATGTTATACTAAAGGACCTGGTATAGGATCAGCATTATATGTAGCATATAATATA TCAAAAATATTCTCTTTACTTTTTAATATACCTGTTATAGGAGTAAACCATTGTATTTCT CATATTGAAATGGGAATCTTTATTACAAAATTACAACATCCTATTATTTTATATGTTAGT GGAAGTAATACACAAATTATTTATTATAATGATTATAAAAAAAAATATGAAATAATCGGA GAAACGCTAGATATTGCTATTGGAAATGTTATTGATCGCTCTGCTCGAATTTTAAAAATT TCTAATTCACCATCTCCTGGCTATAATGTAGAATTATGGGCTCGAAAAAAAAAACTATTA AGACTGCTACGAAAAATGGAAGAAAGGGAAAAGGGAAACCAAATTCATACCAACGATGGC AACAACGAGAGCGATGCTTTGTCTTCCAATTCAAAGGACACTCCTTCATCAAAGTTTAAT AAAAAAGAAAAATTTTCACAATCTTTATATTACAATGAACTACTACAATTCCCTTACACA ATCAAAGGTATGGACATATCCTTTAGTGGTTACGATTTTTATATTAGTAAATACTTTTCA AAATATATAAATAAAAACAGTAAAAAAGGTAATCCACAATATAAAAGTAATAAGAAAAAA GGAACTAGCCAAATTAGTAAAGAAGAAGATAATAATAAAAAACAAAAAATAAACGAAGAT AGTTCTTTACAAAATGATGATATAACCTTAGAAGATGAACTATATCAAGATTCTCCAAAT AGTATTGACAATTCAATTCAAAATAATAACAAGATTAATCATAATAAACAAACAGGAACA GATAAAAATAATGCATTACCTAATTATAATTTCCTACATGGAATGAAAGGAAGTTCATAT TATGAAGATAATATTATATACAAAAATGAAAATAAACAAAATTATGGCCAAAATAATGAA TACTATGATGATAATTGTTCTATAGAAACAAGTTCGGATTATTACGAAAAAGATTTAGAA GAAACTTCACCAGATGAGATTGAAGCTAGTAAATTAACTGATGAAGAAAAAAGAAAAATT CAAATATGCTATAGTTTACAACATCATATATTTAGTATGCTTATTGAAATAACAGAAAGA GCTATCGCCTTTACAAATAGTAAAGAAGTAATTATTGTAGGGGGTGTAGGATGTAATGTA TTCCTTCAAAATATGATGAAAAAAATGGCAAAGCAAAAAAATATAAAAATTGGATTTATG GATCATAGTTATTGTGTTGATAATGGTGCTATGATTGCTTATACCGGATATTTAGAATAT TTAAATTCACAAAAAAAAGAAAATTTCAATTTTGAAAATATATCTATTCACCAGCGCTAC CGAACAGACGACGTCTTTGTCACGTGGCGATAG
  • Download Fasta

  • Fasta :-

    MDEVAKKRMYILGMEGSANKLGISIIDEEMKILVNMRRTYVSEIGCGFIPREINAHHKYY IIDMIKDCLNKLNIKITDIGLICYTKGPGIGSALYVAYNISKIFSLLFNIPVIGVNHCIS HIEMGIFITKLQHPIILYVSGSNTQIIYYNDYKKKYEIIGETLDIAIGNVIDRSARILKI SNSPSPGYNVELWARKKKLLRLLRKMEEREKGNQIHTNDGNNESDALSSNSKDTPSSKFN KKEKFSQSLYYNELLQFPYTIKGMDISFSGYDFYISKYFSKYINKNSKKGNPQYKSNKKK GTSQISKEEDNNKKQKINEDSSLQNDDITLEDELYQDSPNSIDNSIQNNNKINHNKQTGT DKNNALPNYNFLHGMKGSSYYEDNIIYKNENKQNYGQNNEYYDDNCSIETSSDYYEKDLE ETSPDEIEASKLTDEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNV FLQNMMKKMAKQKNIKIGFMDHSYCVDNGAMIAYTGYLEYLNSQKKENFNFENISIHQRY RTDDVFVTWR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0514700335 YEDELYQDSP0.99unspPCHAS_0514700335 YEDELYQDSP0.99unspPCHAS_0514700335 YEDELYQDSP0.99unspPCHAS_0514700423 SLEETSPDEI0.996unspPCHAS_0514700236 SKDTPSSKFN0.992unspPCHAS_0514700306 STSQISKEED0.995unsp

PCHAS_051470      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India