PCHAS_0517700 | plasmepsin VII, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_0517700SP0.0338650.9652270.000908CS pos: 24-25. ILA-IP. Pr: 0.8093
No Results

  • Fasta :-

    >PCHAS_0517700 MKNVYYYFSIIFFLKLFLCNCILAIPQKTLGKGSLSLALNELKNNVDNNSLNILGELKNS KPFINKSFIQTNEKKDNVLLLKLYKQNIASDKLSTYYGKIAIGENSENIFNVLFDTGSTE FWVPFKTCKFTKNNTHNKYERTKSFKYKYDNKGLPSVLEINYLSGKLVGFDGYDTVYLGP GFAIPHTNIAFATSIDIPVLEKFKWDGIIGLGFENEDSQKRGIKPFLDHLKDEKILTEKN YKNMFGYYITNTGGYITLGGIDDRFKRSPDEKIIWSPVSTEMGFWTIDILGIRKEKQPYM NERRDDEVIVKYEGFHDGSNKSIVDTGTFLIYAPKKTMENYLNDLTINSCEDKHKLPYII FQIKSKEIESIKGLSVIELVLSPNDYVIEYIDEVKSTKECIIGIQSDEDNINGWTLGQVF LKSYYTIFDKDNLQIGFVRNKQKLNDETYLNESFLRVNKKRNKKMSYNGPLKL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_0517700.fa Sequence name : PCHAS_0517700 Sequence length : 473 VALUES OF COMPUTED PARAMETERS Coef20 : 4.262 CoefTot : -0.639 ChDiff : 6 ZoneTo : 40 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.641 2.365 0.378 0.744 MesoH : -0.598 0.266 -0.407 0.284 MuHd_075 : 25.707 16.418 7.711 6.215 MuHd_095 : 26.475 17.851 8.888 5.915 MuHd_100 : 18.772 15.268 6.444 4.173 MuHd_105 : 16.545 16.513 5.521 4.817 Hmax_075 : 23.500 23.300 4.458 8.400 Hmax_095 : 14.613 14.350 4.043 5.198 Hmax_100 : 13.500 28.100 3.997 5.250 Hmax_105 : 17.700 22.300 3.950 7.560 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6908 0.3092 DFMC : 0.7906 0.2094
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 473 PCHAS_0517700 MKNVYYYFSIIFFLKLFLCNCILAIPQKTLGKGSLSLALNELKNNVDNNSLNILGELKNSKPFINKSFIQTNEKKDNVLL 80 LKLYKQNIASDKLSTYYGKIAIGENSENIFNVLFDTGSTEFWVPFKTCKFTKNNTHNKYERTKSFKYKYDNKGLPSVLEI 160 NYLSGKLVGFDGYDTVYLGPGFAIPHTNIAFATSIDIPVLEKFKWDGIIGLGFENEDSQKRGIKPFLDHLKDEKILTEKN 240 YKNMFGYYITNTGGYITLGGIDDRFKRSPDEKIIWSPVSTEMGFWTIDILGIRKEKQPYMNERRDDEVIVKYEGFHDGSN 320 KSIVDTGTFLIYAPKKTMENYLNDLTINSCEDKHKLPYIIFQIKSKEIESIKGLSVIELVLSPNDYVIEYIDEVKSTKEC 400 IIGIQSDEDNINGWTLGQVFLKSYYTIFDKDNLQIGFVRNKQKLNDETYLNESFLRVNKKRNKKMSYNGPLKL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..........................P..................................................... 320 ................................................................................ 400 ......................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PCHAS_0517700 2 -----MK|NV 0.078 . PCHAS_0517700 15 SIIFFLK|LF 0.054 . PCHAS_0517700 28 ILAIPQK|TL 0.080 . PCHAS_0517700 32 PQKTLGK|GS 0.056 . PCHAS_0517700 43 LALNELK|NN 0.056 . PCHAS_0517700 58 NILGELK|NS 0.054 . PCHAS_0517700 61 GELKNSK|PF 0.058 . PCHAS_0517700 66 SKPFINK|SF 0.076 . PCHAS_0517700 74 FIQTNEK|KD 0.057 . PCHAS_0517700 75 IQTNEKK|DN 0.094 . PCHAS_0517700 82 DNVLLLK|LY 0.058 . PCHAS_0517700 85 LLLKLYK|QN 0.063 . PCHAS_0517700 92 QNIASDK|LS 0.066 . PCHAS_0517700 99 LSTYYGK|IA 0.068 . PCHAS_0517700 126 EFWVPFK|TC 0.055 . PCHAS_0517700 129 VPFKTCK|FT 0.075 . PCHAS_0517700 132 KTCKFTK|NN 0.068 . PCHAS_0517700 138 KNNTHNK|YE 0.074 . PCHAS_0517700 141 THNKYER|TK 0.103 . PCHAS_0517700 143 NKYERTK|SF 0.084 . PCHAS_0517700 146 ERTKSFK|YK 0.076 . PCHAS_0517700 148 TKSFKYK|YD 0.184 . PCHAS_0517700 152 KYKYDNK|GL 0.066 . PCHAS_0517700 166 INYLSGK|LV 0.079 . PCHAS_0517700 202 DIPVLEK|FK 0.066 . PCHAS_0517700 204 PVLEKFK|WD 0.069 . PCHAS_0517700 220 ENEDSQK|RG 0.056 . PCHAS_0517700 221 NEDSQKR|GI 0.213 . PCHAS_0517700 224 SQKRGIK|PF 0.155 . PCHAS_0517700 231 PFLDHLK|DE 0.058 . PCHAS_0517700 234 DHLKDEK|IL 0.057 . PCHAS_0517700 239 EKILTEK|NY 0.058 . PCHAS_0517700 242 LTEKNYK|NM 0.059 . PCHAS_0517700 264 LGGIDDR|FK 0.075 . PCHAS_0517700 266 GIDDRFK|RS 0.056 . PCHAS_0517700 267 IDDRFKR|SP 0.765 *ProP* PCHAS_0517700 272 KRSPDEK|II 0.084 . PCHAS_0517700 293 IDILGIR|KE 0.067 . PCHAS_0517700 294 DILGIRK|EK 0.067 . PCHAS_0517700 296 LGIRKEK|QP 0.116 . PCHAS_0517700 303 QPYMNER|RD 0.107 . PCHAS_0517700 304 PYMNERR|DD 0.183 . PCHAS_0517700 311 DDEVIVK|YE 0.064 . PCHAS_0517700 321 FHDGSNK|SI 0.087 . PCHAS_0517700 335 FLIYAPK|KT 0.060 . PCHAS_0517700 336 LIYAPKK|TM 0.120 . PCHAS_0517700 353 INSCEDK|HK 0.069 . PCHAS_0517700 355 SCEDKHK|LP 0.069 . PCHAS_0517700 364 YIIFQIK|SK 0.075 . PCHAS_0517700 366 IFQIKSK|EI 0.074 . PCHAS_0517700 372 KEIESIK|GL 0.078 . PCHAS_0517700 395 EYIDEVK|ST 0.072 . PCHAS_0517700 398 DEVKSTK|EC 0.066 . PCHAS_0517700 422 LGQVFLK|SY 0.096 . PCHAS_0517700 430 YYTIFDK|DN 0.066 . PCHAS_0517700 439 LQIGFVR|NK 0.081 . PCHAS_0517700 441 IGFVRNK|QK 0.060 . PCHAS_0517700 443 FVRNKQK|LN 0.070 . PCHAS_0517700 456 LNESFLR|VN 0.074 . PCHAS_0517700 459 SFLRVNK|KR 0.093 . PCHAS_0517700 460 FLRVNKK|RN 0.091 . PCHAS_0517700 461 LRVNKKR|NK 0.273 . PCHAS_0517700 463 VNKKRNK|KM 0.067 . PCHAS_0517700 464 NKKRNKK|MS 0.324 . PCHAS_0517700 472 SYNGPLK|L- 0.063 . ____________________________^_________________

  • Fasta :-

    >PCHAS_0517700 ATGAAAAATGTATATTACTATTTTTCCATTATTTTTTTTTTGAAATTGTTTTTATGTAAT TGCATATTAGCTATACCCCAAAAAACTCTTGGTAAAGGTTCACTTTCTTTAGCGTTAAAC GAATTAAAAAATAATGTAGACAATAATTCTTTAAATATATTAGGAGAATTAAAAAATTCT AAGCCTTTTATAAATAAATCTTTTATACAAACAAATGAGAAAAAAGACAATGTTTTGTTA TTAAAATTGTATAAGCAAAACATAGCTTCTGATAAATTGTCTACTTATTATGGTAAGATA GCAATAGGTGAAAATTCAGAAAACATATTTAATGTTTTATTTGATACAGGTTCAACTGAA TTTTGGGTGCCTTTTAAAACTTGTAAATTTACAAAAAATAATACCCATAATAAATATGAA CGTACGAAATCGTTTAAATATAAATATGACAATAAAGGGTTACCAAGTGTATTGGAGATA AATTACCTCAGTGGAAAGTTAGTAGGATTTGACGGCTATGATACGGTTTACCTAGGCCCT GGCTTCGCCATTCCCCATACGAACATAGCGTTTGCCACAAGCATAGATATACCCGTTTTG GAAAAATTCAAATGGGACGGGATAATAGGACTTGGATTCGAAAATGAAGATTCCCAAAAG CGCGGAATAAAACCCTTTTTAGATCATTTAAAAGATGAAAAAATTTTAACAGAGAAAAAT TACAAGAACATGTTTGGCTATTATATAACTAACACAGGAGGGTACATAACACTAGGTGGA ATAGATGATCGTTTTAAAAGAAGTCCTGATGAAAAAATTATTTGGAGCCCAGTTTCAACA GAAATGGGGTTTTGGACAATTGACATTTTAGGAATACGAAAAGAAAAACAACCATATATG AATGAAAGAAGAGATGATGAGGTGATTGTAAAATATGAAGGATTTCATGATGGAAGTAAT AAATCAATAGTTGATACTGGAACATTTTTAATATATGCGCCTAAAAAAACAATGGAAAAT TATTTAAATGATCTGACAATAAATTCTTGTGAAGATAAACACAAATTACCATATATAATT TTTCAAATAAAATCAAAAGAAATTGAATCAATAAAAGGATTATCTGTTATTGAATTAGTT TTATCTCCTAATGATTATGTCATAGAATATATAGATGAAGTGAAATCAACAAAAGAATGT ATCATAGGTATACAATCCGATGAAGACAATATAAATGGATGGACGCTAGGACAAGTTTTT TTAAAATCCTATTACACGATTTTTGATAAAGATAATTTACAGATTGGTTTTGTTCGAAAT AAACAAAAATTAAATGATGAAACTTATTTAAATGAATCATTTCTAAGGGTTAATAAAAAA CGAAATAAGAAAATGAGTTATAATGGACCACTAAAACTGTAA
  • Download Fasta

  • Fasta :-

    MKNVYYYFSIIFFLKLFLCNCILAIPQKTLGKGSLSLALNELKNNVDNNSLNILGELKNS KPFINKSFIQTNEKKDNVLLLKLYKQNIASDKLSTYYGKIAIGENSENIFNVLFDTGSTE FWVPFKTCKFTKNNTHNKYERTKSFKYKYDNKGLPSVLEINYLSGKLVGFDGYDTVYLGP GFAIPHTNIAFATSIDIPVLEKFKWDGIIGLGFENEDSQKRGIKPFLDHLKDEKILTEKN YKNMFGYYITNTGGYITLGGIDDRFKRSPDEKIIWSPVSTEMGFWTIDILGIRKEKQPYM NERRDDEVIVKYEGFHDGSNKSIVDTGTFLIYAPKKTMENYLNDLTINSCEDKHKLPYII FQIKSKEIESIKGLSVIELVLSPNDYVIEYIDEVKSTKECIIGIQSDEDNINGWTLGQVF LKSYYTIFDKDNLQIGFVRNKQKLNDETYLNESFLRVNKKRNKKMSYNGPLKL

  • title: catalytic residue
  • coordinates: D115,D325
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_0517700279 SWSPVSTEMG0.993unspPCHAS_0517700279 SWSPVSTEMG0.993unspPCHAS_0517700279 SWSPVSTEMG0.993unspPCHAS_0517700322 SGSNKSIVDT0.993unspPCHAS_0517700375 SIKGLSVIEL0.991unspPCHAS_0517700382 SELVLSPNDY0.994unspPCHAS_0517700396 SDEVKSTKEC0.996unspPCHAS_0517700406 SIGIQSDEDN0.993unspPCHAS_0517700218 SENEDSQKRG0.992unspPCHAS_0517700268 SRFKRSPDEK0.993unsp

PCHAS_051770      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India